RNA–Protein interactions for RNA: ENST00000630659.2

BBS1-225, Transcript of Bardet-Biedl syndrome 1, human

TSL 5 BASIC

Gene BBS1, Length 1,934 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
BBS1-225	ENST00000630659	INO80D	Q53TQ3	878 aa	Predicted RBP	15.04	■□□□□ -0
BBS1-225	ENST00000630659	GPR158	Q5T848	1215 aa		15.04	■□□□□ -0
BBS1-225	ENST00000630659	DENND6A	Q8IWF6	608 aa		15.04	■□□□□ -0
BBS1-225	ENST00000630659	C2CD4A	Q8NCU7	369 aa	Predicted RBP	15.04	■□□□□ -0
BBS1-225	ENST00000630659	RHOXF1	Q8NHV9	184 aa		15.04	■□□□□ -0
BBS1-225	ENST00000630659	GABPB2	Q8TAK5	448 aa	Predicted RBP	15.04	■□□□□ -0
BBS1-225	ENST00000630659	WFDC5	Q8TCV5	224 aa		15.04	■□□□□ -0
BBS1-225	ENST00000630659	TTC9	Q92623	222 aa		15.04	■□□□□ -0
BBS1-225	ENST00000630659	ALG14	Q96F25	216 aa		15.04	■□□□□ -0
BBS1-225	ENST00000630659	EXOC2	Q96KP1	924 aa		15.04	■□□□□ -0
BBS1-225	ENST00000630659	DACH2	Q96NX9	599 aa		15.04	■□□□□ -0
BBS1-225	ENST00000630659	CAB39L	Q9H9S4	337 aa		15.04	■□□□□ -0
BBS1-225	ENST00000630659	DIABLO	Q9NR28	239 aa		15.04	■□□□□ -0
BBS1-225	ENST00000630659	PCDHGB1	Q9Y5G3	927 aa		15.04	■□□□□ -0
BBS1-225	ENST00000630659	LDB2	O43679	373 aa		15.04	■□□□□ -0
BBS1-225	ENST00000630659	KATNA1	O75449	491 aa		15.04	■□□□□ -0
BBS1-225	ENST00000630659	CRYZL1	O95825	349 aa		15.04	■□□□□ -0
BBS1-225	ENST00000630659	CLIC3	O95833	236 aa		15.04	■□□□□ -0
BBS1-225	ENST00000630659	BMP4	P12644	408 aa		15.04	■□□□□ -0
BBS1-225	ENST00000630659	CDH1	P12830	882 aa		15.04	■□□□□ -0
BBS1-225	ENST00000630659	NR4A1	P22736	598 aa		15.04	■□□□□ -0
BBS1-225	ENST00000630659	DDX6	P26196	483 aa	Known RBP eCLIP	15.04	■□□□□ -0
BBS1-225	ENST00000630659	CASP3	P42574	277 aa		15.04	■□□□□ -0
BBS1-225	ENST00000630659	SLC1A2	P43004	574 aa		15.04	■□□□□ -0
BBS1-225	ENST00000630659	ALDH3A2	P51648	485 aa		15.04	■□□□□ -0
BBS1-225	ENST00000630659	MAPK10	P53779	464 aa		15.04	■□□□□ -0
BBS1-225	ENST00000630659	IRF9	Q00978	393 aa		15.04	■□□□□ -0
BBS1-225	ENST00000630659	VAC14	Q08AM6	782 aa		15.04	■□□□□ -0
BBS1-225	ENST00000630659	C19orf57	Q0VDD7	668 aa		15.04	■□□□□ -0
BBS1-225	ENST00000630659	WDR45B	Q5MNZ6	344 aa		15.04	■□□□□ -0
BBS1-225	ENST00000630659	MPP7	Q5T2T1	576 aa		15.04	■□□□□ -0
BBS1-225	ENST00000630659	ZNF470	Q6ECI4	717 aa		15.04	■□□□□ -0
BBS1-225	ENST00000630659	LINGO4	Q6UY18	593 aa		15.04	■□□□□ -0
BBS1-225	ENST00000630659	ZBTB46	Q86UZ6	589 aa		15.04	■□□□□ -0
BBS1-225	ENST00000630659	OR13J1	Q8NGT2	312 aa		15.04	■□□□□ -0
BBS1-225	ENST00000630659	MAGEE2	Q8TD90	523 aa	Predicted RBP	15.04	■□□□□ -0
BBS1-225	ENST00000630659	BRSK1	Q8TDC3	778 aa		15.04	■□□□□ -0
BBS1-225	ENST00000630659	C1QTNF1	Q9BXJ1	281 aa		15.04	■□□□□ -0
BBS1-225	ENST00000630659	PAK1IP1	Q9NWT1	392 aa	Predicted RBP	15.04	■□□□□ -0
BBS1-225	ENST00000630659	CCDC167	Q9P0B6	97 aa		15.04	■□□□□ -0
BBS1-225	ENST00000630659	ANAPC2	Q9UJX6	822 aa		15.04	■□□□□ -0
BBS1-225	ENST00000630659	FBXO5	Q9UKT4	447 aa		15.04	■□□□□ -0
BBS1-225	ENST00000630659	SLC39A10	Q9ULF5	831 aa		15.04	■□□□□ -0
BBS1-225	ENST00000630659	ARIH1	Q9Y4X5	557 aa	Predicted RBP	15.04	■□□□□ -0
BBS1-225	ENST00000630659	TARM1	B6A8C7	271 aa		15.03	■□□□□ -0
BBS1-225	ENST00000630659	GRM6	O15303	877 aa		15.03	■□□□□ -0
BBS1-225	ENST00000630659	SLC7A4	O43246	635 aa		15.03	■□□□□ -0
BBS1-225	ENST00000630659	IRS1	P35568	1242 aa		15.03	■□□□□ -0
BBS1-225	ENST00000630659	EIF2D	P41214	584 aa	Known RBP	15.03	■□□□□ -0
BBS1-225	ENST00000630659	SPRED2	Q7Z698	418 aa		15.03	■□□□□ -0
BBS1-225	ENST00000630659	RNF135	Q8IUD6	432 aa		15.03	■□□□□ -0
BBS1-225	ENST00000630659	TMEM151A	Q8N4L1	468 aa		15.03	■□□□□ -0
BBS1-225	ENST00000630659	DCAF4L2	Q8NA75	395 aa		15.03	■□□□□ -0
BBS1-225	ENST00000630659	ACVR1C	Q8NER5	493 aa		15.03	■□□□□ -0
BBS1-225	ENST00000630659	HMGCLL1	Q8TB92	370 aa		15.03	■□□□□ -0
BBS1-225	ENST00000630659	BLOC1S5	Q8TDH9	187 aa		15.03	■□□□□ -0
BBS1-225	ENST00000630659	PEX13	Q92968	403 aa		15.03	■□□□□ -0
BBS1-225	ENST00000630659	TCEAL4	Q96EI5	215 aa		15.03	■□□□□ -0
BBS1-225	ENST00000630659	ELMO2	Q96JJ3	720 aa		15.03	■□□□□ -0
BBS1-225	ENST00000630659	SCYL1	Q96KG9	808 aa		15.03	■□□□□ -0
BBS1-225	ENST00000630659	SMG9	Q9H0W8	520 aa	Known RBP	15.03	■□□□□ -0
BBS1-225	ENST00000630659	EPS8L2	Q9H6S3	715 aa		15.03	■□□□□ -0
BBS1-225	ENST00000630659	KL	Q9UEF7	1012 aa		15.03	■□□□□ -0
BBS1-225	ENST00000630659	RIMKLB	Q9ULI2	386 aa		15.03	■□□□□ -0
BBS1-225	ENST00000630659	PDE10A	Q9Y233	779 aa		15.03	■□□□□ -0
BBS1-225	ENST00000630659	DGKB	Q9Y6T7	804 aa		15.03	■□□□□ -0
BBS1-225	ENST00000630659	MKI67	P46013	3256 aa	Known RBP	15.03	■□□□□ -0
BBS1-225	ENST00000630659	E2F8	A0AVK6	867 aa		15.02	■□□□□ -0
BBS1-225	ENST00000630659	TK2	O00142	265 aa		15.02	■□□□□ -0
BBS1-225	ENST00000630659	NDUFS2	O75306	463 aa		15.02	■□□□□ -0
BBS1-225	ENST00000630659	MOSPD3	O75425	235 aa		15.02	■□□□□ -0
BBS1-225	ENST00000630659	ARHGEF15	O94989	841 aa		15.02	■□□□□ -0
BBS1-225	ENST00000630659	SNAP29	O95721	258 aa		15.02	■□□□□ -0
BBS1-225	ENST00000630659	JUN	P05412	331 aa	Known RBP	15.02	■□□□□ -0
BBS1-225	ENST00000630659	MYOG	P15173	224 aa		15.02	■□□□□ -0
BBS1-225	ENST00000630659	HTR1B	P28222	390 aa		15.02	■□□□□ -0
BBS1-225	ENST00000630659	HOXA9	P31269	272 aa		15.02	■□□□□ -0
BBS1-225	ENST00000630659	YAP1	P46937	504 aa	Known RBP	15.02	■□□□□ -0
BBS1-225	ENST00000630659	COPZ1	P61923	177 aa		15.02	■□□□□ -0
BBS1-225	ENST00000630659	CAMK1	Q14012	370 aa		15.02	■□□□□ -0
BBS1-225	ENST00000630659	USP10	Q14694	798 aa	Known RBP	15.02	■□□□□ -0
BBS1-225	ENST00000630659	ARHGAP15	Q53QZ3	475 aa		15.02	■□□□□ -0
BBS1-225	ENST00000630659	PTRH1	Q86Y79	214 aa	Known RBP	15.02	■□□□□ -0
BBS1-225	ENST00000630659	SPPL2C	Q8IUH8	684 aa		15.02	■□□□□ -0
BBS1-225	ENST00000630659	SH3RF2	Q8TEC5	729 aa		15.02	■□□□□ -0
BBS1-225	ENST00000630659	TP53INP1	Q96A56	240 aa		15.02	■□□□□ -0
BBS1-225	ENST00000630659	NACC2	Q96BF6	587 aa		15.02	■□□□□ -0
BBS1-225	ENST00000630659	TRIM54	Q9BYV2	358 aa		15.02	■□□□□ -0
BBS1-225	ENST00000630659	TRIT1	Q9H3H1	467 aa	Known RBP	15.02	■□□□□ -0
BBS1-225	ENST00000630659	MFSD1	Q9H3U5	465 aa		15.02	■□□□□ -0
BBS1-225	ENST00000630659	PCDH12	Q9NPG4	1184 aa		15.02	■□□□□ -0
BBS1-225	ENST00000630659	LHX3	Q9UBR4	397 aa		15.02	■□□□□ -0
BBS1-225	ENST00000630659	ZNF221	Q9UK13	617 aa		15.02	■□□□□ -0
BBS1-225	ENST00000630659	KCTD3	Q9Y597	815 aa		15.02	■□□□□ -0
BBS1-225	ENST00000630659	FAM149A	A5PLN7	773 aa		15.02	□□□□□ -0.01
BBS1-225	ENST00000630659	ZNF99	A8MXY4	864 aa	Predicted RBP	15.02	□□□□□ -0.01
BBS1-225	ENST00000630659	FAM25A	B3EWG3	89 aa		15.02	□□□□□ -0.01
BBS1-225	ENST00000630659	FAM25C	B3EWG5	89 aa		15.02	□□□□□ -0.01
BBS1-225	ENST00000630659	FAM25G	B3EWG6	89 aa		15.02	□□□□□ -0.01
BBS1-225	ENST00000630659	NME4	O00746	187 aa		15.02	□□□□□ -0.01

Retrieved 100 of 20,778 RNA–protein pairs in 54.8 ms