RNA–Protein interactions for RNA: ENST00000627238.1

TRIM29-221, Transcript of tripartite motif containing 29, humanhuman

TSL 5 BASIC

Gene TRIM29, Length 510 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM29-221ENST00000627238 ATP1A4Q13733 1029 aa15.96■□□□□ 0.15
TRIM29-221ENST00000627238 SSPNQ14714 243 aa15.96■□□□□ 0.15
TRIM29-221ENST00000627238 PTCHD3Q3KNS1 767 aa15.96■□□□□ 0.15
TRIM29-221ENST00000627238 FAM69BQ5VUD6 431 aa15.96■□□□□ 0.15
TRIM29-221ENST00000627238 RHBDD2Q6NTF9 364 aa15.96■□□□□ 0.15
TRIM29-221ENST00000627238 MRGPREQ86SM8 312 aa15.96■□□□□ 0.15
TRIM29-221ENST00000627238 CNGA4Q8IV77 575 aa15.96■□□□□ 0.15
TRIM29-221ENST00000627238 TBRG4Q969Z0 631 aaKnown RBP eCLIP15.96■□□□□ 0.15
TRIM29-221ENST00000627238 SGSM3Q96HU1 749 aa15.96■□□□□ 0.15
TRIM29-221ENST00000627238 FERD3LQ96RJ6 166 aa15.96■□□□□ 0.15
TRIM29-221ENST00000627238 BARD1Q99728 777 aaKnown RBP15.96■□□□□ 0.15
TRIM29-221ENST00000627238 FERMT1Q9BQL6 677 aa15.96■□□□□ 0.15
TRIM29-221ENST00000627238 FAM8A1Q9UBU6 413 aa15.96■□□□□ 0.15
TRIM29-221ENST00000627238 SBDSQ9Y3A5 250 aaKnown RBP eCLIP15.96■□□□□ 0.15
TRIM29-221ENST00000627238 PIKFYVEQ9Y2I7 2098 aa15.96■□□□□ 0.15
TRIM29-221ENST00000627238 LDB2O43679 373 aa15.95■□□□□ 0.14
TRIM29-221ENST00000627238 ZNF189O75820 626 aaPredicted RBP15.95■□□□□ 0.14
TRIM29-221ENST00000627238 CBX6O95503 412 aa15.95■□□□□ 0.14
TRIM29-221ENST00000627238 ACRV1P26436 265 aa15.95■□□□□ 0.14
TRIM29-221ENST00000627238 PSMB4P28070 264 aa15.95■□□□□ 0.14
TRIM29-221ENST00000627238 PTPN7P35236 360 aa15.95■□□□□ 0.14
TRIM29-221ENST00000627238 MRPL49Q13405 166 aaKnown RBP15.95■□□□□ 0.14
TRIM29-221ENST00000627238 OLIG2Q13516 323 aa15.95■□□□□ 0.14
TRIM29-221ENST00000627238 MYBPC3Q14896 1274 aa15.95■□□□□ 0.14
TRIM29-221ENST00000627238 EIF2S3LQ2VIR3 472 aaKnown RBP15.95■□□□□ 0.14
TRIM29-221ENST00000627238 CRB2Q5IJ48 1285 aa15.95■□□□□ 0.14
TRIM29-221ENST00000627238 ANKRD20A2Q5SQ80 823 aa15.95■□□□□ 0.14
TRIM29-221ENST00000627238 ANKRD20A1Q5TYW2 823 aa15.95■□□□□ 0.14
TRIM29-221ENST00000627238 ANKRD20A3Q5VUR7 823 aa15.95■□□□□ 0.14
TRIM29-221ENST00000627238 SPESP1Q6UW49 350 aa15.95■□□□□ 0.14
TRIM29-221ENST00000627238 IQCKQ8N0W5 287 aa15.95■□□□□ 0.14
TRIM29-221ENST00000627238 PROKR1Q8TCW9 393 aa15.95■□□□□ 0.14
TRIM29-221ENST00000627238 NACC2Q96BF6 587 aa15.95■□□□□ 0.14
TRIM29-221ENST00000627238 TCTN2Q96GX1 697 aa15.95■□□□□ 0.14
TRIM29-221ENST00000627238 FER1L6-AS2Q96M78 137 aa15.95■□□□□ 0.14
TRIM29-221ENST00000627238 GOLPH3Q9H4A6 298 aa15.95■□□□□ 0.14
TRIM29-221ENST00000627238 ACTR10Q9NZ32 417 aa15.95■□□□□ 0.14
TRIM29-221ENST00000627238 B3GNT3Q9Y2A9 372 aa15.95■□□□□ 0.14
TRIM29-221ENST00000627238 CSMD1Q96PZ7 3565 aa15.95■□□□□ 0.14
TRIM29-221ENST00000627238 H7C0C1 242 aa15.94■□□□□ 0.14
TRIM29-221ENST00000627238 AP2A2O94973 939 aa15.94■□□□□ 0.14
TRIM29-221ENST00000627238 LDLRP01130 860 aa15.94■□□□□ 0.14
TRIM29-221ENST00000627238 PSMA3P25788 255 aa15.94■□□□□ 0.14
TRIM29-221ENST00000627238 PDHA2P29803 388 aa15.94■□□□□ 0.14
TRIM29-221ENST00000627238 ATP5OP48047 213 aa15.94■□□□□ 0.14
TRIM29-221ENST00000627238 PRPSAP1Q14558 356 aa15.94■□□□□ 0.14
TRIM29-221ENST00000627238 ZNF449Q6P9G9 518 aa15.94■□□□□ 0.14
TRIM29-221ENST00000627238 MAMDC2Q7Z304 686 aaPredicted RBP15.94■□□□□ 0.14
TRIM29-221ENST00000627238 CCDC50Q8IVM0 306 aa15.94■□□□□ 0.14
TRIM29-221ENST00000627238 CDKL3Q8IVW4 592 aaPredicted RBP15.94■□□□□ 0.14
TRIM29-221ENST00000627238 GPR135Q8IZ08 494 aa15.94■□□□□ 0.14
TRIM29-221ENST00000627238 C19orf47Q8N9M1 422 aaKnown RBP15.94■□□□□ 0.14
TRIM29-221ENST00000627238 FLVCR1-AS1Q8TAF5 88 aa15.94■□□□□ 0.14
TRIM29-221ENST00000627238 ACTL9Q8TC94 416 aa15.94■□□□□ 0.14
TRIM29-221ENST00000627238 TFGQ92734 400 aaPredicted RBP15.94■□□□□ 0.14
TRIM29-221ENST00000627238 KRT35Q92764 455 aa15.94■□□□□ 0.14
TRIM29-221ENST00000627238 SNRNP40Q96DI7 357 aaKnown RBP15.94■□□□□ 0.14
TRIM29-221ENST00000627238 GBP5Q96PP8 586 aa15.94■□□□□ 0.14
TRIM29-221ENST00000627238 APOL2Q9BQE5 337 aa15.94■□□□□ 0.14
TRIM29-221ENST00000627238 MFRPQ9BY79 579 aa15.94■□□□□ 0.14
TRIM29-221ENST00000627238 SLC7A5P2Q9GIP4 190 aa15.94■□□□□ 0.14
TRIM29-221ENST00000627238 NUP210LQ5VU65 1888 aa15.94■□□□□ 0.14
TRIM29-221ENST00000627238 POLEQ07864 2286 aa15.93■□□□□ 0.14
TRIM29-221ENST00000627238 ANKRD12Q6UB98 2062 aa15.93■□□□□ 0.14
TRIM29-221ENST00000627238 CREBBPQ92793 2442 aa15.93■□□□□ 0.14
TRIM29-221ENST00000627238 LIN7AO14910 233 aaPredicted RBP15.93■□□□□ 0.14
TRIM29-221ENST00000627238 DDX3YO15523 660 aaKnown RBP15.93■□□□□ 0.14
TRIM29-221ENST00000627238 PJA2O43164 708 aa15.93■□□□□ 0.14
TRIM29-221ENST00000627238 IPO13O94829 963 aaKnown RBP15.93■□□□□ 0.14
TRIM29-221ENST00000627238 PVRP15151 417 aa15.93■□□□□ 0.14
TRIM29-221ENST00000627238 MC4RP32245 332 aa15.93■□□□□ 0.14
TRIM29-221ENST00000627238 SHMT2P34897 504 aa15.93■□□□□ 0.14
TRIM29-221ENST00000627238 CTNNA1P35221 906 aaKnown RBP15.93■□□□□ 0.14
TRIM29-221ENST00000627238 MAGEA1P43355 309 aa15.93■□□□□ 0.14
TRIM29-221ENST00000627238 OTUD4Q01804 1114 aaKnown RBP15.93■□□□□ 0.14
TRIM29-221ENST00000627238 TBX2Q13207 712 aaPredicted RBP15.93■□□□□ 0.14
TRIM29-221ENST00000627238 PLEKHN1Q494U1 663 aaPredicted RBP15.93■□□□□ 0.14
TRIM29-221ENST00000627238 DCAF10Q5QP82 559 aa15.93■□□□□ 0.14
TRIM29-221ENST00000627238 MRPL14Q6P1L8 145 aaKnown RBP15.93■□□□□ 0.14
TRIM29-221ENST00000627238 SERPINA9Q86WD7 417 aa15.93■□□□□ 0.14
TRIM29-221ENST00000627238 PHC3Q8NDX5 983 aa15.93■□□□□ 0.14
TRIM29-221ENST00000627238 OR2Y1Q8NGV0 311 aa15.93■□□□□ 0.14
TRIM29-221ENST00000627238 SPATA13Q96N96 652 aa15.93■□□□□ 0.14
TRIM29-221ENST00000627238 NRTNQ99748 197 aa15.93■□□□□ 0.14
TRIM29-221ENST00000627238 TBL1YQ9BQ87 522 aa15.93■□□□□ 0.14
TRIM29-221ENST00000627238 HEMGNQ9BXL5 484 aa15.93■□□□□ 0.14
TRIM29-221ENST00000627238 ZNF552Q9H707 407 aaPredicted RBP15.93■□□□□ 0.14
TRIM29-221ENST00000627238 C10orf88Q9H8K7 445 aa15.93■□□□□ 0.14
TRIM29-221ENST00000627238 FAM60AQ9NP50 221 aa15.93■□□□□ 0.14
TRIM29-221ENST00000627238 CASS4Q9NQ75 786 aa15.93■□□□□ 0.14
TRIM29-221ENST00000627238 NLE1Q9NVX2 485 aaPredicted RBP15.93■□□□□ 0.14
TRIM29-221ENST00000627238 OR6C2Q9NZP2 312 aa15.93■□□□□ 0.14
TRIM29-221ENST00000627238 LUZP4Q9P127 313 aa15.93■□□□□ 0.14
TRIM29-221ENST00000627238 SRPK3Q9UPE1 567 aa15.93■□□□□ 0.14
TRIM29-221ENST00000627238 ICKQ9UPZ9 632 aa15.93■□□□□ 0.14
TRIM29-221ENST00000627238 A6NL46 340 aa15.92■□□□□ 0.14
TRIM29-221ENST00000627238 QSOX1O00391 747 aa15.92■□□□□ 0.14
TRIM29-221ENST00000627238 OR2B3O76000 313 aa15.92■□□□□ 0.14
TRIM29-221ENST00000627238 STK10O94804 968 aaKnown RBP15.92■□□□□ 0.14
TRIM29-221ENST00000627238 ALPPP05187 535 aa15.92■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms