RNA–Protein interactions for RNA: ENST00000625245.2

SMN1-211, Transcript of survival of motor neuron 1, telomeric, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene SMN1, Length 885 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMN1-211ENST00000625245 RAB43Q86YS6 212 aa18.38■□□□□ 0.53
SMN1-211ENST00000625245 CDKL3Q8IVW4 592 aaPredicted RBP18.38■□□□□ 0.53
SMN1-211ENST00000625245 Q8NA96 180 aa18.38■□□□□ 0.53
SMN1-211ENST00000625245 GLIS1Q8NBF1 620 aa18.38■□□□□ 0.53
SMN1-211ENST00000625245 PRR7Q8TB68 274 aa18.38■□□□□ 0.53
SMN1-211ENST00000625245 CCDC110Q8TBZ0 833 aa18.38■□□□□ 0.53
SMN1-211ENST00000625245 PITPNM3Q9BZ71 974 aa18.38■□□□□ 0.53
SMN1-211ENST00000625245 SLC29A3Q9BZD2 475 aa18.38■□□□□ 0.53
SMN1-211ENST00000625245 TFB2MQ9H5Q4 396 aaKnown RBP18.38■□□□□ 0.53
SMN1-211ENST00000625245 MVB12BQ9H7P6 319 aa18.38■□□□□ 0.53
SMN1-211ENST00000625245 VPS37BQ9H9H4 285 aa18.38■□□□□ 0.53
SMN1-211ENST00000625245 ZDHHC3Q9NYG2 299 aa18.38■□□□□ 0.53
SMN1-211ENST00000625245 ACTR10Q9NZ32 417 aa18.38■□□□□ 0.53
SMN1-211ENST00000625245 PADI2Q9Y2J8 665 aa18.38■□□□□ 0.53
SMN1-211ENST00000625245 PRRC2CQ9Y520 2896 aaKnown RBP18.38■□□□□ 0.53
SMN1-211ENST00000625245 FER1L5A0AVI2 2057 aa18.37■□□□□ 0.53
SMN1-211ENST00000625245 HIVEP3Q5T1R4 2406 aa18.37■□□□□ 0.53
SMN1-211ENST00000625245 HBQ1P09105 142 aa18.37■□□□□ 0.53
SMN1-211ENST00000625245 RNF224P0DH78 156 aa18.37■□□□□ 0.53
SMN1-211ENST00000625245 EIF3EP60228 445 aaKnown RBP18.37■□□□□ 0.53
SMN1-211ENST00000625245 MSLNQ13421 630 aaPredicted RBP18.37■□□□□ 0.53
SMN1-211ENST00000625245 CDHR3Q6ZTQ4 885 aa18.37■□□□□ 0.53
SMN1-211ENST00000625245 MICALCLQ6ZW33 695 aa18.37■□□□□ 0.53
SMN1-211ENST00000625245 SERPINA9Q86WD7 417 aa18.37■□□□□ 0.53
SMN1-211ENST00000625245 HPS6Q86YV9 775 aa18.37■□□□□ 0.53
SMN1-211ENST00000625245 GPR135Q8IZ08 494 aa18.37■□□□□ 0.53
SMN1-211ENST00000625245 TFGQ92734 400 aaPredicted RBP18.37■□□□□ 0.53
SMN1-211ENST00000625245 PNPLA2Q96AD5 504 aa18.37■□□□□ 0.53
SMN1-211ENST00000625245 TBL1YQ9BQ87 522 aa18.37■□□□□ 0.53
SMN1-211ENST00000625245 DPH2Q9BQC3 489 aaPredicted RBP18.37■□□□□ 0.53
SMN1-211ENST00000625245 LDB2O43679 373 aa18.36■□□□□ 0.53
SMN1-211ENST00000625245 MSL3P1P0C860 447 aa18.36■□□□□ 0.53
SMN1-211ENST00000625245 PRSS56P0CW18 603 aa18.36■□□□□ 0.53
SMN1-211ENST00000625245 RBP3P10745 1247 aa18.36■□□□□ 0.53
SMN1-211ENST00000625245 CD151P48509 253 aa18.36■□□□□ 0.53
SMN1-211ENST00000625245 MDC1Q14676 2089 aaKnown RBP18.36■□□□□ 0.53
SMN1-211ENST00000625245 GPR33Q49SQ1 333 aa18.36■□□□□ 0.53
SMN1-211ENST00000625245 C1orf189Q5VU69 101 aa18.36■□□□□ 0.53
SMN1-211ENST00000625245 DENND5AQ6IQ26 1287 aa18.36■□□□□ 0.53
SMN1-211ENST00000625245 C11orf63Q6NUN7 778 aa18.36■□□□□ 0.53
SMN1-211ENST00000625245 ADGRF3Q8IZF5 1079 aa18.36■□□□□ 0.53
SMN1-211ENST00000625245 CLDN19Q8N6F1 224 aa18.36■□□□□ 0.53
SMN1-211ENST00000625245 PCSK5Q92824 1860 aa18.36■□□□□ 0.53
SMN1-211ENST00000625245 DNAJC1Q96KC8 554 aaKnown RBP18.36■□□□□ 0.53
SMN1-211ENST00000625245 SPATA13Q96N96 652 aa18.36■□□□□ 0.53
SMN1-211ENST00000625245 CUEDC1Q9NWM3 386 aaPredicted RBP18.36■□□□□ 0.53
SMN1-211ENST00000625245 GPN3Q9UHW5 284 aaPredicted RBP18.36■□□□□ 0.53
SMN1-211ENST00000625245 PCDHA13Q9Y5I0 950 aa18.36■□□□□ 0.53
SMN1-211ENST00000625245 ANKRD12Q6UB98 2062 aa18.35■□□□□ 0.53
SMN1-211ENST00000625245 KRT86O43790 486 aa18.35■□□□□ 0.53
SMN1-211ENST00000625245 CBSLP0DN79 551 aa18.35■□□□□ 0.53
SMN1-211ENST00000625245 ACRV1P26436 265 aa18.35■□□□□ 0.53
SMN1-211ENST00000625245 VARSP26640 1264 aaKnown RBP18.35■□□□□ 0.53
SMN1-211ENST00000625245 CBSP35520 551 aa18.35■□□□□ 0.53
SMN1-211ENST00000625245 COPS2P61201 443 aa18.35■□□□□ 0.53
SMN1-211ENST00000625245 RPA4Q13156 261 aa18.35■□□□□ 0.53
SMN1-211ENST00000625245 BOP1Q14137 746 aaKnown RBP18.35■□□□□ 0.53
SMN1-211ENST00000625245 DEFB110Q30KQ9 67 aa18.35■□□□□ 0.53
SMN1-211ENST00000625245 SPESP1Q6UW49 350 aa18.35■□□□□ 0.53
SMN1-211ENST00000625245 TRIM73Q86UV7 250 aa18.35■□□□□ 0.53
SMN1-211ENST00000625245 LRRC45Q96CN5 670 aa18.35■□□□□ 0.53
SMN1-211ENST00000625245 C19orf60Q96EN9 201 aa18.35■□□□□ 0.53
SMN1-211ENST00000625245 SMAD5Q99717 465 aaKnown RBP18.35■□□□□ 0.53
SMN1-211ENST00000625245 OSBPL8Q9BZF1 889 aa18.35■□□□□ 0.53
SMN1-211ENST00000625245 SPRTNQ9H040 489 aaPredicted RBP18.35■□□□□ 0.53
SMN1-211ENST00000625245 FAM60AQ9NP50 221 aa18.35■□□□□ 0.53
SMN1-211ENST00000625245 PTRH2Q9Y3E5 179 aaKnown RBP18.35■□□□□ 0.53
SMN1-211ENST00000625245 SNRNP200O75643 2136 aaKnown RBP18.34■□□□□ 0.53
SMN1-211ENST00000625245 IGLV3-16A0A075B6K0 115 aa18.34■□□□□ 0.53
SMN1-211ENST00000625245 OR2B3O76000 313 aa18.34■□□□□ 0.53
SMN1-211ENST00000625245 TPH1P17752 444 aa18.34■□□□□ 0.53
SMN1-211ENST00000625245 SSPNQ14714 243 aa18.34■□□□□ 0.53
SMN1-211ENST00000625245 BRD3Q15059 726 aa18.34■□□□□ 0.53
SMN1-211ENST00000625245 SPA17Q15506 151 aa18.34■□□□□ 0.53
SMN1-211ENST00000625245 PLEKHN1Q494U1 663 aaPredicted RBP18.34■□□□□ 0.53
SMN1-211ENST00000625245 VWA5B1Q5TIE3 1220 aa18.34■□□□□ 0.53
SMN1-211ENST00000625245 ZNF385CQ66K41 422 aaPredicted RBP18.34■□□□□ 0.53
SMN1-211ENST00000625245 MRGPREQ86SM8 312 aa18.34■□□□□ 0.53
SMN1-211ENST00000625245 C19orf47Q8N9M1 422 aaKnown RBP18.34■□□□□ 0.53
SMN1-211ENST00000625245 RNF214Q8ND24 703 aa18.34■□□□□ 0.53
SMN1-211ENST00000625245 TBRG4Q969Z0 631 aaKnown RBP eCLIP18.34■□□□□ 0.53
SMN1-211ENST00000625245 PPP1R2P1Q96PQ5 205 aa18.34■□□□□ 0.53
SMN1-211ENST00000625245 C17orf62Q9BQA9 187 aa18.34■□□□□ 0.53
SMN1-211ENST00000625245 DHRS4Q9BTZ2 278 aa18.34■□□□□ 0.53
SMN1-211ENST00000625245 IRAK4Q9NWZ3 460 aa18.34■□□□□ 0.53
SMN1-211ENST00000625245 SMARCAL1Q9NZC9 954 aa18.34■□□□□ 0.53
SMN1-211ENST00000625245 FEZ2Q9UHY8 353 aaPredicted RBP18.34■□□□□ 0.53
SMN1-211ENST00000625245 ICKQ9UPZ9 632 aa18.34■□□□□ 0.53
SMN1-211ENST00000625245 AP1M2Q9Y6Q5 423 aa18.34■□□□□ 0.53
SMN1-211ENST00000625245 PEX12O00623 359 aa18.33■□□□□ 0.52
SMN1-211ENST00000625245 PJA2O43164 708 aa18.33■□□□□ 0.52
SMN1-211ENST00000625245 KLF7O75840 302 aaPredicted RBP18.33■□□□□ 0.52
SMN1-211ENST00000625245 DDAH2O95865 285 aa18.33■□□□□ 0.52
SMN1-211ENST00000625245 UGT2B7P16662 529 aa18.33■□□□□ 0.52
SMN1-211ENST00000625245 FOLR3P41439 243 aa18.33■□□□□ 0.52
SMN1-211ENST00000625245 TBX2Q13207 712 aaPredicted RBP18.33■□□□□ 0.52
SMN1-211ENST00000625245 NR6A1Q15406 480 aa18.33■□□□□ 0.52
SMN1-211ENST00000625245 ZNF658BQ4V348 819 aaPredicted RBP18.33■□□□□ 0.52
SMN1-211ENST00000625245 UNC5AQ6ZN44 842 aa18.33■□□□□ 0.52
SMN1-211ENST00000625245 IQCKQ8N0W5 287 aa18.33■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 42.2 ms