RNA–Protein interactions for RNA: ENST00000624403.1

ATRX-216, Transcript of ATRX, chromatin remodeler, humanhuman

TSL 3

Gene ATRX, Length 583 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATRX-216ENST00000624403 SIPA1Q96FS4 1042 aa10.1□□□□□ -0.79
ATRX-216ENST00000624403 MRGPRX1Q96LB2 322 aa10.1□□□□□ -0.79
ATRX-216ENST00000624403 KCNA7Q96RP8 456 aa10.1□□□□□ -0.79
ATRX-216ENST00000624403 ZNF382Q96SR6 550 aa10.1□□□□□ -0.79
ATRX-216ENST00000624403 CD244Q9BZW8 370 aa10.1□□□□□ -0.79
ATRX-216ENST00000624403 LRMDAQ9H2I8 198 aa10.1□□□□□ -0.79
ATRX-216ENST00000624403 ZNF385DQ9H6B1 395 aa10.1□□□□□ -0.79
ATRX-216ENST00000624403 NOL11Q9H8H0 719 aaKnown RBP10.1□□□□□ -0.79
ATRX-216ENST00000624403 LNPEPQ9UIQ6 1025 aa10.1□□□□□ -0.79
ATRX-216ENST00000624403 MMP17Q9ULZ9 603 aa10.1□□□□□ -0.79
ATRX-216ENST00000624403 SCML1Q9UN30 329 aa10.1□□□□□ -0.79
ATRX-216ENST00000624403 NDRG2Q9UN36 371 aaKnown RBP10.1□□□□□ -0.79
ATRX-216ENST00000624403 G3BP2Q9UN86 482 aaKnown RBP10.1□□□□□ -0.79
ATRX-216ENST00000624403 CAPN7Q9Y6W3 813 aa10.1□□□□□ -0.79
ATRX-216ENST00000624403 LRRK1Q38SD2 2015 aa10.1□□□□□ -0.79
ATRX-216ENST00000624403 CFAP73A6NFT4 308 aa10.09□□□□□ -0.79
ATRX-216ENST00000624403 MYO1CO00159 1063 aa10.09□□□□□ -0.79
ATRX-216ENST00000624403 OR7A17O14581 309 aa10.09□□□□□ -0.79
ATRX-216ENST00000624403 DCXO43602 365 aa10.09□□□□□ -0.79
ATRX-216ENST00000624403 CCNT2O60583 730 aaKnown RBP10.09□□□□□ -0.79
ATRX-216ENST00000624403 HNRNPCL1O60812 293 aaKnown RBP10.09□□□□□ -0.79
ATRX-216ENST00000624403 CRCPO75575 148 aa10.09□□□□□ -0.79
ATRX-216ENST00000624403 POP7O75817 140 aaKnown RBP10.09□□□□□ -0.79
ATRX-216ENST00000624403 MATN4O95460 622 aa10.09□□□□□ -0.79
ATRX-216ENST00000624403 ESRRBO95718 433 aa10.09□□□□□ -0.79
ATRX-216ENST00000624403 PAK4O96013 591 aaPredicted RBP10.09□□□□□ -0.79
ATRX-216ENST00000624403 ENO1P06733 434 aaKnown RBP10.09□□□□□ -0.79
ATRX-216ENST00000624403 ANXA5P08758 320 aa10.09□□□□□ -0.79
ATRX-216ENST00000624403 GSTM1P09488 218 aa10.09□□□□□ -0.79
ATRX-216ENST00000624403 ESRRAP11474 423 aaPredicted RBP10.09□□□□□ -0.79
ATRX-216ENST00000624403 CYP2A7P20853 494 aa10.09□□□□□ -0.79
ATRX-216ENST00000624403 CALB2P22676 271 aa10.09□□□□□ -0.79
ATRX-216ENST00000624403 TEAD1P28347 426 aa10.09□□□□□ -0.79
ATRX-216ENST00000624403 PRDX3P30048 256 aaKnown RBP10.09□□□□□ -0.79
ATRX-216ENST00000624403 GDF5P43026 501 aa10.09□□□□□ -0.79
ATRX-216ENST00000624403 PKNOX1P55347 436 aa10.09□□□□□ -0.79
ATRX-216ENST00000624403 ERVPABLB-1P60509 514 aa10.09□□□□□ -0.79
ATRX-216ENST00000624403 KCNJ2P63252 427 aa10.09□□□□□ -0.79
ATRX-216ENST00000624403 GSTM4Q03013 218 aa10.09□□□□□ -0.79
ATRX-216ENST00000624403 SGCGQ13326 291 aa10.09□□□□□ -0.79
ATRX-216ENST00000624403 INPP5AQ14642 412 aa10.09□□□□□ -0.79
ATRX-216ENST00000624403 TTC31Q49AM3 519 aaPredicted RBP10.09□□□□□ -0.79
ATRX-216ENST00000624403 TMEM198Q66K66 360 aa10.09□□□□□ -0.79
ATRX-216ENST00000624403 XKR5Q6UX68 686 aa10.09□□□□□ -0.79
ATRX-216ENST00000624403 KIAA1324Q6UXG2 1013 aaKnown RBP10.09□□□□□ -0.79
ATRX-216ENST00000624403 USP30Q70CQ3 517 aa10.09□□□□□ -0.79
ATRX-216ENST00000624403 FAM124AQ86V42 546 aa10.09□□□□□ -0.79
ATRX-216ENST00000624403 HORMAD1Q86X24 394 aa10.09□□□□□ -0.79
ATRX-216ENST00000624403 ZNF547Q8IVP9 402 aa10.09□□□□□ -0.79
ATRX-216ENST00000624403 CCDC116Q8IYX3 515 aa10.09□□□□□ -0.79
ATRX-216ENST00000624403 SLC22A15Q8IZD6 547 aa10.09□□□□□ -0.79
ATRX-216ENST00000624403 TCAIMQ8N3R3 496 aa10.09□□□□□ -0.79
ATRX-216ENST00000624403 CPSF7Q8N684 471 aaKnown RBP10.09□□□□□ -0.79
ATRX-216ENST00000624403 TWIST2Q8WVJ9 160 aa10.09□□□□□ -0.79
ATRX-216ENST00000624403 C19orf60Q96EN9 201 aa10.09□□□□□ -0.79
ATRX-216ENST00000624403 ZNF514Q96K75 400 aaPredicted RBP10.09□□□□□ -0.79
ATRX-216ENST00000624403 LINC00615Q96LM1 132 aaPredicted RBP10.09□□□□□ -0.79
ATRX-216ENST00000624403 GUCD1Q96NT3 240 aa10.09□□□□□ -0.79
ATRX-216ENST00000624403 CATSPER2Q96P56 530 aa10.09□□□□□ -0.79
ATRX-216ENST00000624403 LGR4Q9BXB1 951 aa10.09□□□□□ -0.79
ATRX-216ENST00000624403 NUSAP1Q9BXS6 441 aaKnown RBP10.09□□□□□ -0.79
ATRX-216ENST00000624403 TEX101Q9BY14 249 aa10.09□□□□□ -0.79
ATRX-216ENST00000624403 SLC17A9Q9BYT1 436 aa10.09□□□□□ -0.79
ATRX-216ENST00000624403 TRIM54Q9BYV2 358 aa10.09□□□□□ -0.79
ATRX-216ENST00000624403 TUBB1Q9H4B7 451 aa10.09□□□□□ -0.79
ATRX-216ENST00000624403 PREBQ9HCU5 417 aa10.09□□□□□ -0.79
ATRX-216ENST00000624403 ARL15Q9NXU5 204 aa10.09□□□□□ -0.79
ATRX-216ENST00000624403 GULP1Q9UBP9 304 aa10.09□□□□□ -0.79
ATRX-216ENST00000624403 TAGLN3Q9UI15 199 aa10.09□□□□□ -0.79
ATRX-216ENST00000624403 ZNF225Q9UK10 706 aa10.09□□□□□ -0.79
ATRX-216ENST00000624403 FZD4Q9ULV1 537 aa10.09□□□□□ -0.79
ATRX-216ENST00000624403 NCKAP1Q9Y2A7 1128 aa10.09□□□□□ -0.79
ATRX-216ENST00000624403 PCYT1BQ9Y5K3 369 aaPredicted RBP10.09□□□□□ -0.79
ATRX-216ENST00000624403 DNAJC15Q9Y5T4 150 aa10.09□□□□□ -0.79
ATRX-216ENST00000624403 PTGDR2Q9Y5Y4 395 aa10.09□□□□□ -0.79
ATRX-216ENST00000624403 TBC1D3DA0A087WVF3 549 aa10.08□□□□□ -0.8
ATRX-216ENST00000624403 TBC1D3IA0A087WXS9 549 aa10.08□□□□□ -0.8
ATRX-216ENST00000624403 TBC1D3EA0A087X179 549 aa10.08□□□□□ -0.8
ATRX-216ENST00000624403 TBC1D3KA0A087X1G2 549 aa10.08□□□□□ -0.8
ATRX-216ENST00000624403 TCRBV21S2A2A0A5A6 115 aa10.08□□□□□ -0.8
ATRX-216ENST00000624403 KRT87PA6NCN2 255 aa10.08□□□□□ -0.8
ATRX-216ENST00000624403 PABPN1LA6NDY0 278 aaKnown RBP10.08□□□□□ -0.8
ATRX-216ENST00000624403 TBC1D3FA6NER0 549 aaPredicted RBP10.08□□□□□ -0.8
ATRX-216ENST00000624403 ARHGEF33A8MVX0 844 aa10.08□□□□□ -0.8
ATRX-216ENST00000624403 LOC730098B7Z3J9 87 aa10.08□□□□□ -0.8
ATRX-216ENST00000624403 TBC1D3LB9A6J9 549 aa10.08□□□□□ -0.8
ATRX-216ENST00000624403 K7EPI3 171 aa10.08□□□□□ -0.8
ATRX-216ENST00000624403 MAN2B1O00754 1011 aa10.08□□□□□ -0.8
ATRX-216ENST00000624403 LIN7AO14910 233 aaPredicted RBP10.08□□□□□ -0.8
ATRX-216ENST00000624403 PIP5K1BO14986 540 aa10.08□□□□□ -0.8
ATRX-216ENST00000624403 CHUKO15111 745 aa10.08□□□□□ -0.8
ATRX-216ENST00000624403 TNRC18O15417 2968 aaPredicted RBP10.08□□□□□ -0.8
ATRX-216ENST00000624403 PSIP1O75475 530 aaKnown RBP10.08□□□□□ -0.8
ATRX-216ENST00000624403 OR4F21O95013 312 aa10.08□□□□□ -0.8
ATRX-216ENST00000624403 HIST1H2AGP0C0S8 130 aaPredicted RBP10.08□□□□□ -0.8
ATRX-216ENST00000624403 TBC1D3HP0C7X1 549 aa10.08□□□□□ -0.8
ATRX-216ENST00000624403 UROSP10746 265 aa10.08□□□□□ -0.8
ATRX-216ENST00000624403 ACADMP11310 421 aa10.08□□□□□ -0.8
ATRX-216ENST00000624403 IL9P15248 144 aa10.08□□□□□ -0.8
ATRX-216ENST00000624403 NQO1P15559 274 aaKnown RBP10.08□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms