RNA–Protein interactions for RNA: ENST00000623073.3

ERCC6-209, Transcript of ERCC excision repair 6, chromatin remodeling factor, humanhuman

TSL 1 (best)

Gene ERCC6, Length 11,026 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC6-209ENST00000623073 UBXN11Q5T124 520 aa6.31□□□□□ -1.4
ERCC6-209ENST00000623073 PSD4Q8NDX1 1056 aa6.31□□□□□ -1.4
ERCC6-209ENST00000623073 RHOXF1Q8NHV9 184 aa6.31□□□□□ -1.4
ERCC6-209ENST00000623073 PHF21BQ96EK2 531 aa6.31□□□□□ -1.4
ERCC6-209ENST00000623073 S100A16Q96FQ6 103 aaKnown RBP6.31□□□□□ -1.4
ERCC6-209ENST00000623073 ALG9Q9H6U8 611 aa6.31□□□□□ -1.4
ERCC6-209ENST00000623073 RNF121Q9H920 327 aa6.31□□□□□ -1.4
ERCC6-209ENST00000623073 C12orf10Q9HB07 376 aa6.31□□□□□ -1.4
ERCC6-209ENST00000623073 NKX1-2Q9UD57 310 aaPredicted RBP6.31□□□□□ -1.4
ERCC6-209ENST00000623073 FNDC3AQ9Y2H6 1198 aaKnown RBP6.31□□□□□ -1.4
ERCC6-209ENST00000623073 ALKQ9UM73 1620 aa6.31□□□□□ -1.4
ERCC6-209ENST00000623073 FAM159BA6NKW6 160 aa6.31□□□□□ -1.4
ERCC6-209ENST00000623073 POLRMTO00411 1230 aaKnown RBP6.31□□□□□ -1.4
ERCC6-209ENST00000623073 PRAMEF12O95522 483 aa6.31□□□□□ -1.4
ERCC6-209ENST00000623073 SLC2A5P22732 501 aa6.31□□□□□ -1.4
ERCC6-209ENST00000623073 RIC1Q4ADV7 1423 aa6.31□□□□□ -1.4
ERCC6-209ENST00000623073 FKBP1CQ5VVH2 108 aa6.31□□□□□ -1.4
ERCC6-209ENST00000623073 SULF1Q8IWU6 871 aa6.31□□□□□ -1.4
ERCC6-209ENST00000623073 FAM20CQ8IXL6 584 aa6.31□□□□□ -1.4
ERCC6-209ENST00000623073 PSD2Q9BQI7 771 aa6.31□□□□□ -1.4
ERCC6-209ENST00000623073 C2orf49Q9BVC5 232 aaPredicted RBP6.31□□□□□ -1.4
ERCC6-209ENST00000623073 MRIQ9BWK5 157 aa6.31□□□□□ -1.4
ERCC6-209ENST00000623073 CNTNAP4Q9C0A0 1308 aa6.31□□□□□ -1.4
ERCC6-209ENST00000623073 MIOSQ9NXC5 875 aa6.31□□□□□ -1.4
ERCC6-209ENST00000623073 CPSF4O95639 269 aaKnown RBP6.31□□□□□ -1.4
ERCC6-209ENST00000623073 HIST1H2ABP04908 130 aa6.31□□□□□ -1.4
ERCC6-209ENST00000623073 HSD17B2P37059 387 aa6.31□□□□□ -1.4
ERCC6-209ENST00000623073 TSPAN5P62079 268 aa6.31□□□□□ -1.4
ERCC6-209ENST00000623073 HIST3H2AQ7L7L0 130 aa6.31□□□□□ -1.4
ERCC6-209ENST00000623073 CAND1Q86VP6 1230 aaKnown RBP6.31□□□□□ -1.4
ERCC6-209ENST00000623073 WDSUB1Q8N9V3 476 aa6.31□□□□□ -1.4
ERCC6-209ENST00000623073 HIST1H2ACQ93077 130 aa6.31□□□□□ -1.4
ERCC6-209ENST00000623073 AKT1S1Q96B36 256 aa6.31□□□□□ -1.4
ERCC6-209ENST00000623073 VMP1Q96GC9 406 aa6.31□□□□□ -1.4
ERCC6-209ENST00000623073 DNAJC1Q96KC8 554 aaKnown RBP6.31□□□□□ -1.4
ERCC6-209ENST00000623073 APBA2Q99767 749 aa6.31□□□□□ -1.4
ERCC6-209ENST00000623073 POLR2J3Q9H1A7 115 aaKnown RBP6.31□□□□□ -1.4
ERCC6-209ENST00000623073 ZNF214Q9UL59 606 aaPredicted RBP6.31□□□□□ -1.4
ERCC6-209ENST00000623073 CLEC4AQ9UMR7 237 aa6.31□□□□□ -1.4
ERCC6-209ENST00000623073 TFR2Q9UP52 801 aa6.31□□□□□ -1.4
ERCC6-209ENST00000623073 KRBA1A5PL33 1030 aa6.31□□□□□ -1.4
ERCC6-209ENST00000623073 MT-ND5P03915 603 aa6.31□□□□□ -1.4
ERCC6-209ENST00000623073 CKMT1AP12532 417 aa6.31□□□□□ -1.4
ERCC6-209ENST00000623073 RARRES1P49788 294 aa6.31□□□□□ -1.4
ERCC6-209ENST00000623073 HK3P52790 923 aa6.31□□□□□ -1.4
ERCC6-209ENST00000623073 DSTNP60981 165 aa6.31□□□□□ -1.4
ERCC6-209ENST00000623073 SGO1Q5FBB7 561 aa6.31□□□□□ -1.4
ERCC6-209ENST00000623073 BEND7Q8N7W2 519 aaPredicted RBP6.31□□□□□ -1.4
ERCC6-209ENST00000623073 ING5Q8WYH8 240 aa6.31□□□□□ -1.4
ERCC6-209ENST00000623073 C3orf49Q96BT1 292 aa6.31□□□□□ -1.4
ERCC6-209ENST00000623073 SLC39A13Q96H72 371 aa6.31□□□□□ -1.4
ERCC6-209ENST00000623073 TARS2Q9BW92 718 aaKnown RBP6.31□□□□□ -1.4
ERCC6-209ENST00000623073 TPK1Q9H3S4 243 aa6.31□□□□□ -1.4
ERCC6-209ENST00000623073 ENPP5Q9UJA9 477 aa6.31□□□□□ -1.4
ERCC6-209ENST00000623073 CHRNA5P30532 468 aa6.31□□□□□ -1.4
ERCC6-209ENST00000623073 SLC12A3P55017 1021 aa6.31□□□□□ -1.4
ERCC6-209ENST00000623073 CDH11P55287 796 aa6.31□□□□□ -1.4
ERCC6-209ENST00000623073 ZNF169Q14929 603 aaPredicted RBP6.31□□□□□ -1.4
ERCC6-209ENST00000623073 LARS2Q15031 903 aaKnown RBP6.31□□□□□ -1.4
ERCC6-209ENST00000623073 EXOC3L2Q2M3D2 409 aa6.31□□□□□ -1.4
ERCC6-209ENST00000623073 TREML1Q86YW5 311 aa6.31□□□□□ -1.4
ERCC6-209ENST00000623073 ZNF283Q8N7M2 679 aa6.31□□□□□ -1.4
ERCC6-209ENST00000623073 OR51D1Q8NGF3 324 aa6.31□□□□□ -1.4
ERCC6-209ENST00000623073 SCUBE2Q9NQ36 999 aa6.31□□□□□ -1.4
ERCC6-209ENST00000623073 GLTPQ9NZD2 209 aa6.31□□□□□ -1.4
ERCC6-209ENST00000623073 TRPC4Q9UBN4 977 aa6.31□□□□□ -1.4
ERCC6-209ENST00000623073 NUBP2Q9Y5Y2 271 aa6.31□□□□□ -1.4
ERCC6-209ENST00000623073 TCAF2A6NFQ2 919 aa6.31□□□□□ -1.4
ERCC6-209ENST00000623073 DUXAA6NLW8 204 aa6.31□□□□□ -1.4
ERCC6-209ENST00000623073 H3BM21 787 aa6.31□□□□□ -1.4
ERCC6-209ENST00000623073 GTF2F2P13984 249 aa6.31□□□□□ -1.4
ERCC6-209ENST00000623073 OSTNP61366 133 aa6.31□□□□□ -1.4
ERCC6-209ENST00000623073 KEAP1Q14145 624 aa6.31□□□□□ -1.4
ERCC6-209ENST00000623073 RNF130Q86XS8 419 aa6.31□□□□□ -1.4
ERCC6-209ENST00000623073 CEP97Q8IW35 865 aa6.31□□□□□ -1.4
ERCC6-209ENST00000623073 OR1J4Q8NGS1 313 aa6.31□□□□□ -1.4
ERCC6-209ENST00000623073 ABCD2Q9UBJ2 740 aa6.31□□□□□ -1.4
ERCC6-209ENST00000623073 DPP7Q9UHL4 492 aa6.31□□□□□ -1.4
ERCC6-209ENST00000623073 LOC100130705A0A1B0GUX0 176 aa6.31□□□□□ -1.4
ERCC6-209ENST00000623073 SLC37A4O43826 429 aa6.31□□□□□ -1.4
ERCC6-209ENST00000623073 PRAMEF2O60811 474 aa6.31□□□□□ -1.4
ERCC6-209ENST00000623073 POU6F1Q14863 301 aa6.31□□□□□ -1.4
ERCC6-209ENST00000623073 SF3A2Q15428 464 aaKnown RBP6.31□□□□□ -1.4
ERCC6-209ENST00000623073 SEC23BQ15437 767 aa6.31□□□□□ -1.4
ERCC6-209ENST00000623073 RNF212Q495C1 297 aa6.31□□□□□ -1.4
ERCC6-209ENST00000623073 IL31Q6EBC2 164 aa6.31□□□□□ -1.4
ERCC6-209ENST00000623073 LPCAT3Q6P1A2 487 aa6.31□□□□□ -1.4
ERCC6-209ENST00000623073 RTL4Q6ZR62 310 aa6.31□□□□□ -1.4
ERCC6-209ENST00000623073 TWIST2Q8WVJ9 160 aa6.31□□□□□ -1.4
ERCC6-209ENST00000623073 USP7Q93009 1102 aa6.31□□□□□ -1.4
ERCC6-209ENST00000623073 SPATA33Q96N06 139 aa6.31□□□□□ -1.4
ERCC6-209ENST00000623073 TRIB3Q96RU7 358 aa6.31□□□□□ -1.4
ERCC6-209ENST00000623073 TBCDQ9BTW9 1192 aa6.31□□□□□ -1.4
ERCC6-209ENST00000623073 NEUROD4Q9HD90 331 aa6.31□□□□□ -1.4
ERCC6-209ENST00000623073 SLC22A11Q9NSA0 550 aa6.31□□□□□ -1.4
ERCC6-209ENST00000623073 TSPAN16Q9UKR8 245 aa6.31□□□□□ -1.4
ERCC6-209ENST00000623073 MRPS33Q9Y291 106 aaKnown RBP6.31□□□□□ -1.4
ERCC6-209ENST00000623073 ANKRD12Q6UB98 2062 aa6.3□□□□□ -1.4
ERCC6-209ENST00000623073 GIMAP1-GIMAP5A0A087WTJ2 511 aa6.3□□□□□ -1.4
ERCC6-209ENST00000623073 PGLSO95336 258 aa6.3□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms