RNA–Protein interactions for RNA: ENST00000621897.1

BRCA1-229, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 5

Gene BRCA1, Length 375 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-229ENST00000621897 GTSCR1Q86UQ5 136 aa3.86□□□□□ -1.79
BRCA1-229ENST00000621897 LMNTD2Q8IXW0 634 aa3.86□□□□□ -1.79
BRCA1-229ENST00000621897 CPSF7Q8N684 471 aaKnown RBP3.86□□□□□ -1.79
BRCA1-229ENST00000621897 ZNF611Q8N823 705 aa3.86□□□□□ -1.79
BRCA1-229ENST00000621897 KBTBD8Q8NFY9 601 aa3.86□□□□□ -1.79
BRCA1-229ENST00000621897 OR1J1Q8NGS3 322 aa3.86□□□□□ -1.79
BRCA1-229ENST00000621897 OR2T11Q8NH01 316 aa3.86□□□□□ -1.79
BRCA1-229ENST00000621897 C16orf70Q9BSU1 422 aa3.86□□□□□ -1.79
BRCA1-229ENST00000621897 SH3GLB2Q9NR46 395 aa3.86□□□□□ -1.79
BRCA1-229ENST00000621897 INTS9Q9NV88 658 aaKnown RBP3.86□□□□□ -1.79
BRCA1-229ENST00000621897 AMACRQ9UHK6 382 aa3.86□□□□□ -1.79
BRCA1-229ENST00000621897 ISY1Q9ULR0 285 aaKnown RBP3.86□□□□□ -1.79
BRCA1-229ENST00000621897 EXO1Q9UQ84 846 aaKnown RBP3.86□□□□□ -1.79
BRCA1-229ENST00000621897 A0A087WW49 117 aa3.85□□□□□ -1.79
BRCA1-229ENST00000621897 A0A1W2PRB8 838 aa3.85□□□□□ -1.79
BRCA1-229ENST00000621897 MED19A0JLT2 244 aaPredicted RBP3.85□□□□□ -1.79
BRCA1-229ENST00000621897 CDRT15L2A8MXV6 281 aa3.85□□□□□ -1.79
BRCA1-229ENST00000621897 H7C423 109 aa3.85□□□□□ -1.79
BRCA1-229ENST00000621897 ATP6V0E1O15342 81 aa3.85□□□□□ -1.79
BRCA1-229ENST00000621897 HMMRO75330 724 aa3.85□□□□□ -1.79
BRCA1-229ENST00000621897 EDN1P05305 212 aa3.85□□□□□ -1.79
BRCA1-229ENST00000621897 DPEP1P16444 411 aa3.85□□□□□ -1.79
BRCA1-229ENST00000621897 WASHC5Q12768 1159 aa3.85□□□□□ -1.79
BRCA1-229ENST00000621897 PRKG2Q13237 762 aa3.85□□□□□ -1.79
BRCA1-229ENST00000621897 CCDC30Q5VVM6 783 aa3.85□□□□□ -1.79
BRCA1-229ENST00000621897 AACSQ86V21 672 aa3.85□□□□□ -1.79
BRCA1-229ENST00000621897 OTUD6BQ8N6M0 293 aa3.85□□□□□ -1.79
BRCA1-229ENST00000621897 MRGPRDQ8TDS7 321 aa3.85□□□□□ -1.79
BRCA1-229ENST00000621897 ZFAND2BQ8WV99 257 aa3.85□□□□□ -1.79
BRCA1-229ENST00000621897 MOCOSQ96EN8 888 aa3.85□□□□□ -1.79
BRCA1-229ENST00000621897 SGK494Q96LW2 274 aa3.85□□□□□ -1.79
BRCA1-229ENST00000621897 CEP295NLQ96MC4 621 aa3.85□□□□□ -1.79
BRCA1-229ENST00000621897 VGLL1Q99990 258 aa3.85□□□□□ -1.79
BRCA1-229ENST00000621897 TRIM15Q9C019 465 aa3.85□□□□□ -1.79
BRCA1-229ENST00000621897 A4GALTQ9NPC4 353 aa3.85□□□□□ -1.79
BRCA1-229ENST00000621897 OSER1Q9NX31 292 aa3.85□□□□□ -1.79
BRCA1-229ENST00000621897 ASIC3Q9UHC3 531 aa3.85□□□□□ -1.79
BRCA1-229ENST00000621897 EXOGQ9Y2C4 368 aaKnown RBP3.85□□□□□ -1.79
BRCA1-229ENST00000621897 RIPK3Q9Y572 518 aa3.85□□□□□ -1.79
BRCA1-229ENST00000621897 ASTN2O75129 1339 aaPredicted RBP3.85□□□□□ -1.79
BRCA1-229ENST00000621897 MITFO75030 526 aaPredicted RBP3.84□□□□□ -1.79
BRCA1-229ENST00000621897 PTP4A3O75365 173 aa3.84□□□□□ -1.79
BRCA1-229ENST00000621897 CREG1O75629 220 aa3.84□□□□□ -1.79
BRCA1-229ENST00000621897 CDC123O75794 336 aaPredicted RBP3.84□□□□□ -1.79
BRCA1-229ENST00000621897 BAIAP3O94812 1187 aa3.84□□□□□ -1.79
BRCA1-229ENST00000621897 CEBPBP17676 345 aa3.84□□□□□ -1.79
BRCA1-229ENST00000621897 SLC6A12P48065 614 aa3.84□□□□□ -1.79
BRCA1-229ENST00000621897 B3GALT5-AS1P59052 145 aa3.84□□□□□ -1.79
BRCA1-229ENST00000621897 LMO4P61968 165 aa3.84□□□□□ -1.79
BRCA1-229ENST00000621897 MRPS5P82675 430 aaKnown RBP3.84□□□□□ -1.79
BRCA1-229ENST00000621897 ROR1Q01973 937 aa3.84□□□□□ -1.79
BRCA1-229ENST00000621897 RRS1Q15050 365 aaKnown RBP3.84□□□□□ -1.79
BRCA1-229ENST00000621897 SLC1A5Q15758 541 aa3.84□□□□□ -1.79
BRCA1-229ENST00000621897 XKR6Q5GH73 641 aa3.84□□□□□ -1.79
BRCA1-229ENST00000621897 FAM180BQ6P0A1 224 aa3.84□□□□□ -1.79
BRCA1-229ENST00000621897 LINGO4Q6UY18 593 aa3.84□□□□□ -1.79
BRCA1-229ENST00000621897 INTS8Q75QN2 995 aaKnown RBP3.84□□□□□ -1.79
BRCA1-229ENST00000621897 FAM114A1Q8IWE2 563 aa3.84□□□□□ -1.79
BRCA1-229ENST00000621897 MCEMP1Q8IX19 187 aa3.84□□□□□ -1.79
BRCA1-229ENST00000621897 ZNF440Q8IYI8 595 aa3.84□□□□□ -1.79
BRCA1-229ENST00000621897 ADGRF2Q8IZF7 708 aa3.84□□□□□ -1.79
BRCA1-229ENST00000621897 TTC39CQ8N584 583 aa3.84□□□□□ -1.79
BRCA1-229ENST00000621897 TMEM178AQ8NBL3 297 aa3.84□□□□□ -1.79
BRCA1-229ENST00000621897 HPSE2Q8WWQ2 592 aa3.84□□□□□ -1.79
BRCA1-229ENST00000621897 MTERF3Q96E29 417 aa3.84□□□□□ -1.79
BRCA1-229ENST00000621897 C18orf12Q96KH6 178 aa3.84□□□□□ -1.79
BRCA1-229ENST00000621897 MYH15Q9Y2K3 1946 aa3.83□□□□□ -1.8
BRCA1-229ENST00000621897 LNP1A1A4G5 178 aa3.83□□□□□ -1.8
BRCA1-229ENST00000621897 F5H0A9 414 aaPredicted RBP3.83□□□□□ -1.8
BRCA1-229ENST00000621897 TYMPP19971 482 aa3.83□□□□□ -1.8
BRCA1-229ENST00000621897 CAPN3P20807 821 aa3.83□□□□□ -1.8
BRCA1-229ENST00000621897 OAS2P29728 719 aaKnown RBP3.83□□□□□ -1.8
BRCA1-229ENST00000621897 HOXC13P31276 330 aa3.83□□□□□ -1.8
BRCA1-229ENST00000621897 PEX19P40855 299 aa3.83□□□□□ -1.8
BRCA1-229ENST00000621897 KRT83P78385 493 aa3.83□□□□□ -1.8
BRCA1-229ENST00000621897 CDR2Q01850 454 aa3.83□□□□□ -1.8
BRCA1-229ENST00000621897 DMPKQ09013 629 aa3.83□□□□□ -1.8
BRCA1-229ENST00000621897 FAAH2Q6GMR7 532 aa3.83□□□□□ -1.8
BRCA1-229ENST00000621897 TBC1D1Q86TI0 1168 aaPredicted RBP3.83□□□□□ -1.8
BRCA1-229ENST00000621897 RPAINQ86UA6 219 aa3.83□□□□□ -1.8
BRCA1-229ENST00000621897 SPEM1Q8N4L4 309 aa3.83□□□□□ -1.8
BRCA1-229ENST00000621897 MAPKAPK5-AS1Q8N8E1 139 aa3.83□□□□□ -1.8
BRCA1-229ENST00000621897 HDAC2Q92769 488 aaKnown RBP3.83□□□□□ -1.8
BRCA1-229ENST00000621897 LRRC59Q96AG4 307 aaKnown RBP3.83□□□□□ -1.8
BRCA1-229ENST00000621897 OR6C1Q96RD1 312 aa3.83□□□□□ -1.8
BRCA1-229ENST00000621897 PYGO2Q9BRQ0 406 aa3.83□□□□□ -1.8
BRCA1-229ENST00000621897 SYT11Q9BT88 431 aa3.83□□□□□ -1.8
BRCA1-229ENST00000621897 CABLES2Q9BTV7 478 aa3.83□□□□□ -1.8
BRCA1-229ENST00000621897 VN1R1Q9GZP7 353 aa3.83□□□□□ -1.8
BRCA1-229ENST00000621897 LAT2Q9GZY6 243 aa3.83□□□□□ -1.8
BRCA1-229ENST00000621897 ARRDC1-AS1Q9H2J1 176 aa3.83□□□□□ -1.8
BRCA1-229ENST00000621897 HRH4Q9H3N8 390 aa3.83□□□□□ -1.8
BRCA1-229ENST00000621897 EIF2B3Q9NR50 452 aaKnown RBP3.83□□□□□ -1.8
BRCA1-229ENST00000621897 TBC1D22BQ9NU19 505 aa3.83□□□□□ -1.8
BRCA1-229ENST00000621897 TAB2Q9NYJ8 693 aa3.83□□□□□ -1.8
BRCA1-229ENST00000621897 FLRT3Q9NZU0 649 aa3.83□□□□□ -1.8
BRCA1-229ENST00000621897 OSGIN1Q9UJX0 560 aa3.83□□□□□ -1.8
BRCA1-229ENST00000621897 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP3.83□□□□□ -1.8
BRCA1-229ENST00000621897 SYNRGQ9UMZ2 1314 aa3.83□□□□□ -1.8
BRCA1-229ENST00000621897 PCNX3Q9H6A9 2034 aa3.82□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 52.9 ms