RNA–Protein interactions for RNA: ENST00000617185.4

TP53-222, Transcript of tumor protein p53, human

TSL 1 (best) BASIC

Gene TP53, Length 2,724 nt, Biotype protein coding, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
TP53-222	ENST00000617185	RGS1	Q08116	209 aa		11.37	□□□□□ -0.59
TP53-222	ENST00000617185	ARMCX4	Q5H9R4	360 aa		11.37	□□□□□ -0.59
TP53-222	ENST00000617185	TIGD7	Q6NT04	549 aa	Predicted RBP	11.37	□□□□□ -0.59
TP53-222	ENST00000617185	ANKS3	Q6ZW76	656 aa		11.37	□□□□□ -0.59
TP53-222	ENST00000617185	PROSER1	Q86XN7	944 aa		11.37	□□□□□ -0.59
TP53-222	ENST00000617185	TMEM151B	Q8IW70	566 aa		11.37	□□□□□ -0.59
TP53-222	ENST00000617185	KBTBD8	Q8NFY9	601 aa		11.37	□□□□□ -0.59
TP53-222	ENST00000617185	CNIH3	Q8TBE1	160 aa		11.37	□□□□□ -0.59
TP53-222	ENST00000617185	FANK1	Q8TC84	345 aa		11.37	□□□□□ -0.59
TP53-222	ENST00000617185	FBLIM1	Q8WUP2	373 aa		11.37	□□□□□ -0.59
TP53-222	ENST00000617185	TRNT1	Q96Q11	434 aa	Known RBP	11.37	□□□□□ -0.59
TP53-222	ENST00000617185	UGT2B28	Q9BY64	529 aa		11.37	□□□□□ -0.59
TP53-222	ENST00000617185	TRIM54	Q9BYV2	358 aa		11.37	□□□□□ -0.59
TP53-222	ENST00000617185	TMEM168	Q9H0V1	697 aa		11.37	□□□□□ -0.59
TP53-222	ENST00000617185	COX16	Q9P0S2	106 aa		11.37	□□□□□ -0.59
TP53-222	ENST00000617185	CPNE7	Q9UBL6	633 aa		11.37	□□□□□ -0.59
TP53-222	ENST00000617185	SLC23A1	Q9UHI7	598 aa		11.37	□□□□□ -0.59
TP53-222	ENST00000617185	C3orf18	Q9UK00	162 aa		11.37	□□□□□ -0.59
TP53-222	ENST00000617185	HSPE1-MOB4	S4R3N1	261 aa		11.37	□□□□□ -0.59
TP53-222	ENST00000617185	FAM92A	A1XBS5	289 aa		11.36	□□□□□ -0.59
TP53-222	ENST00000617185	ZNF98	A6NK75	572 aa		11.36	□□□□□ -0.59
TP53-222	ENST00000617185	MRPS14	O60783	128 aa	Known RBP	11.36	□□□□□ -0.59
TP53-222	ENST00000617185	PPM1B	O75688	479 aa		11.36	□□□□□ -0.59
TP53-222	ENST00000617185	SUPT7L	O94864	414 aa		11.36	□□□□□ -0.59
TP53-222	ENST00000617185	MT-ND2	P03891	347 aa		11.36	□□□□□ -0.59
TP53-222	ENST00000617185	ALPP	P05187	535 aa		11.36	□□□□□ -0.59
TP53-222	ENST00000617185	CTSH	P09668	335 aa		11.36	□□□□□ -0.59
TP53-222	ENST00000617185	HOXB3	P14651	431 aa	Predicted RBP	11.36	□□□□□ -0.59
TP53-222	ENST00000617185	PDGFRA	P16234	1089 aa		11.36	□□□□□ -0.59
TP53-222	ENST00000617185	GPX3	P22352	226 aa		11.36	□□□□□ -0.59
TP53-222	ENST00000617185	HTR7	P34969	479 aa		11.36	□□□□□ -0.59
TP53-222	ENST00000617185	TIE1	P35590	1138 aa		11.36	□□□□□ -0.59
TP53-222	ENST00000617185	GLRB	P48167	497 aa		11.36	□□□□□ -0.59
TP53-222	ENST00000617185	AFF1	P51825	1210 aa	Known RBP	11.36	□□□□□ -0.59
TP53-222	ENST00000617185	ARHGDIA	P52565	204 aa		11.36	□□□□□ -0.59
TP53-222	ENST00000617185	IL5RA	Q01344	420 aa		11.36	□□□□□ -0.59
TP53-222	ENST00000617185	SETMAR	Q53H47	684 aa	Predicted RBP	11.36	□□□□□ -0.59
TP53-222	ENST00000617185	C6orf132	Q5T0Z8	1188 aa		11.36	□□□□□ -0.59
TP53-222	ENST00000617185	CNST	Q6PJW8	725 aa		11.36	□□□□□ -0.59
TP53-222	ENST00000617185	TAGAP	Q8N103	731 aa		11.36	□□□□□ -0.59
TP53-222	ENST00000617185	ZBTB44	Q8NCP5	570 aa		11.36	□□□□□ -0.59
TP53-222	ENST00000617185	RXFP2	Q8WXD0	754 aa		11.36	□□□□□ -0.59
TP53-222	ENST00000617185	AKAP1	Q92667	903 aa	Known RBP eCLIP	11.36	□□□□□ -0.59
TP53-222	ENST00000617185	ASIC4	Q96FT7	647 aa		11.36	□□□□□ -0.59
TP53-222	ENST00000617185	RBM4B	Q9BQ04	359 aa	Known RBP	11.36	□□□□□ -0.59
TP53-222	ENST00000617185	RBM4	Q9BWF3	364 aa	Known RBP	11.36	□□□□□ -0.59
TP53-222	ENST00000617185	C1QTNF1	Q9BXJ1	281 aa		11.36	□□□□□ -0.59
TP53-222	ENST00000617185	SLC6A17	Q9H1V8	727 aa		11.36	□□□□□ -0.59
TP53-222	ENST00000617185	FAM83D	Q9H4H8	585 aa		11.36	□□□□□ -0.59
TP53-222	ENST00000617185	CCNB1IP1	Q9NPC3	277 aa		11.36	□□□□□ -0.59
TP53-222	ENST00000617185	NMRK2	Q9NPI5	230 aa		11.36	□□□□□ -0.59
TP53-222	ENST00000617185	EVA1B	Q9NVM1	165 aa		11.36	□□□□□ -0.59
TP53-222	ENST00000617185	ADGRE2	Q9UHX3	823 aa		11.36	□□□□□ -0.59
TP53-222	ENST00000617185	RUVBL2	Q9Y230	463 aa	Known RBP	11.36	□□□□□ -0.59
TP53-222	ENST00000617185	CIT	O14578	2027 aa		11.36	□□□□□ -0.59
TP53-222	ENST00000617185	TARM1	B6A8C7	271 aa		11.36	□□□□□ -0.59
TP53-222	ENST00000617185	BTN3A3	O00478	584 aa		11.36	□□□□□ -0.59
TP53-222	ENST00000617185	MED7	O43513	233 aa		11.36	□□□□□ -0.59
TP53-222	ENST00000617185	RGS10	O43665	173 aa		11.36	□□□□□ -0.59
TP53-222	ENST00000617185	TP53	P04637	393 aa	Predicted RBP	11.36	□□□□□ -0.59
TP53-222	ENST00000617185	PFKM	P08237	780 aa		11.36	□□□□□ -0.59
TP53-222	ENST00000617185	CLEC2L	P0C7M8	214 aa		11.36	□□□□□ -0.59
TP53-222	ENST00000617185	KEL	P23276	732 aa		11.36	□□□□□ -0.59
TP53-222	ENST00000617185	HLA-DMA	P28067	261 aa		11.36	□□□□□ -0.59
TP53-222	ENST00000617185	CPT1A	P50416	773 aa		11.36	□□□□□ -0.59
TP53-222	ENST00000617185	RBP5	P82980	135 aa		11.36	□□□□□ -0.59
TP53-222	ENST00000617185	LIPE	Q05469	1076 aa		11.36	□□□□□ -0.59
TP53-222	ENST00000617185	IKZF1	Q13422	519 aa		11.36	□□□□□ -0.59
TP53-222	ENST00000617185	VPS26B	Q4G0F5	336 aa		11.36	□□□□□ -0.59
TP53-222	ENST00000617185	C16orf62	Q7Z3J2	963 aa		11.36	□□□□□ -0.59
TP53-222	ENST00000617185	SYVN1	Q86TM6	617 aa		11.36	□□□□□ -0.59
TP53-222	ENST00000617185	FSTL5	Q8N475	847 aa	Predicted RBP	11.36	□□□□□ -0.59
TP53-222	ENST00000617185	UBASH3B	Q8TF42	649 aa		11.36	□□□□□ -0.59
TP53-222	ENST00000617185	TMEM125	Q96AQ2	219 aa		11.36	□□□□□ -0.59
TP53-222	ENST00000617185	ZFP42	Q96MM3	310 aa		11.36	□□□□□ -0.59
TP53-222	ENST00000617185	PARK7	Q99497	189 aa	Known RBP	11.36	□□□□□ -0.59
TP53-222	ENST00000617185	SLC30A2	Q9BRI3	323 aa		11.36	□□□□□ -0.59
TP53-222	ENST00000617185	SPATA9	Q9BWV2	254 aa		11.36	□□□□□ -0.59
TP53-222	ENST00000617185	ITPA	Q9BY32	194 aa		11.36	□□□□□ -0.59
TP53-222	ENST00000617185	CYP3A43	Q9HB55	503 aa		11.36	□□□□□ -0.59
TP53-222	ENST00000617185	EXD2	Q9NVH0	621 aa		11.36	□□□□□ -0.59
TP53-222	ENST00000617185	FAM8A1	Q9UBU6	413 aa		11.36	□□□□□ -0.59
TP53-222	ENST00000617185	OR2A25	A4D2G3	310 aa		11.35	□□□□□ -0.59
TP53-222	ENST00000617185	MYADML2	A6NDP7	307 aa		11.35	□□□□□ -0.59
TP53-222	ENST00000617185	NOBOX	O60393	691 aa		11.35	□□□□□ -0.59
TP53-222	ENST00000617185	ZNF623	O75123	536 aa		11.35	□□□□□ -0.59
TP53-222	ENST00000617185	TRIM3	O75382	744 aa	Predicted RBP	11.35	□□□□□ -0.59
TP53-222	ENST00000617185	GPR32	O75388	356 aa		11.35	□□□□□ -0.59
TP53-222	ENST00000617185	RAP2A	P10114	183 aa		11.35	□□□□□ -0.59
TP53-222	ENST00000617185	LCP1	P13796	627 aa		11.35	□□□□□ -0.59
TP53-222	ENST00000617185	MYL9	P24844	172 aa		11.35	□□□□□ -0.59
TP53-222	ENST00000617185	MTHFR	P42898	656 aa		11.35	□□□□□ -0.59
TP53-222	ENST00000617185	CXCR4	P61073	352 aa		11.35	□□□□□ -0.59
TP53-222	ENST00000617185	SOX4	Q06945	474 aa	Predicted RBP	11.35	□□□□□ -0.59
TP53-222	ENST00000617185	ZMYND11	Q15326	602 aa		11.35	□□□□□ -0.59
TP53-222	ENST00000617185	TAF1C	Q15572	869 aa	Predicted RBP	11.35	□□□□□ -0.59
TP53-222	ENST00000617185	KIF19	Q2TAC6	998 aa		11.35	□□□□□ -0.59
TP53-222	ENST00000617185	TMEM81	Q6P7N7	255 aa		11.35	□□□□□ -0.59
TP53-222	ENST00000617185	CES3	Q6UWW8	571 aa		11.35	□□□□□ -0.59
TP53-222	ENST00000617185	CTU1	Q7Z7A3	348 aa	Known RBP	11.35	□□□□□ -0.59

Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms