RNA–Protein interactions for RNA: ENST00000617172.4

TARDBP-218, Transcript of TAR DNA binding protein, humanhuman

TSL 5

Gene TARDBP, Length 980 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TARDBP-218ENST00000617172 PITPNM3Q9BZ71 974 aa9.39□□□□□ -0.91
TARDBP-218ENST00000617172 ACTL8Q9H568 366 aa9.39□□□□□ -0.91
TARDBP-218ENST00000617172 CASS4Q9NQ75 786 aa9.39□□□□□ -0.91
TARDBP-218ENST00000617172 HOMER3Q9NSC5 361 aa9.39□□□□□ -0.91
TARDBP-218ENST00000617172 PIH1D1Q9NWS0 290 aaKnown RBP9.39□□□□□ -0.91
TARDBP-218ENST00000617172 OR6C2Q9NZP2 312 aa9.39□□□□□ -0.91
TARDBP-218ENST00000617172 FARSAQ9Y285 508 aaKnown RBP9.39□□□□□ -0.91
TARDBP-218ENST00000617172 ASF1AQ9Y294 204 aa9.39□□□□□ -0.91
TARDBP-218ENST00000617172 DRG1Q9Y295 367 aaKnown RBP9.39□□□□□ -0.91
TARDBP-218ENST00000617172 SLC5A10A0PJK1 596 aa9.38□□□□□ -0.91
TARDBP-218ENST00000617172 CCDC78A2IDD5 438 aa9.38□□□□□ -0.91
TARDBP-218ENST00000617172 CCDC162PA2VCL2 907 aa9.38□□□□□ -0.91
TARDBP-218ENST00000617172 CDC14CA4D256 554 aa9.38□□□□□ -0.91
TARDBP-218ENST00000617172 MEN1O00255 615 aa9.38□□□□□ -0.91
TARDBP-218ENST00000617172 BTN3A3O00478 584 aa9.38□□□□□ -0.91
TARDBP-218ENST00000617172 RFPL1O75677 317 aa9.38□□□□□ -0.91
TARDBP-218ENST00000617172 ZIC2O95409 532 aaPredicted RBP9.38□□□□□ -0.91
TARDBP-218ENST00000617172 RPN2P04844 631 aa9.38□□□□□ -0.91
TARDBP-218ENST00000617172 RAB40ALP0C0E4 278 aa9.38□□□□□ -0.91
TARDBP-218ENST00000617172 CCDC175P0C221 793 aa9.38□□□□□ -0.91
TARDBP-218ENST00000617172 PRSS56P0CW18 603 aa9.38□□□□□ -0.91
TARDBP-218ENST00000617172 ACADLP28330 430 aa9.38□□□□□ -0.91
TARDBP-218ENST00000617172 CASRP41180 1078 aa9.38□□□□□ -0.91
TARDBP-218ENST00000617172 PMS2P54278 862 aa9.38□□□□□ -0.91
TARDBP-218ENST00000617172 PRAMEP78395 509 aa9.38□□□□□ -0.91
TARDBP-218ENST00000617172 NFKB2Q00653 900 aa9.38□□□□□ -0.91
TARDBP-218ENST00000617172 PRKG2Q13237 762 aa9.38□□□□□ -0.91
TARDBP-218ENST00000617172 SNX1Q13596 522 aa9.38□□□□□ -0.91
TARDBP-218ENST00000617172 GPR19Q15760 415 aa9.38□□□□□ -0.91
TARDBP-218ENST00000617172 UGT8Q16880 541 aa9.38□□□□□ -0.91
TARDBP-218ENST00000617172 SYTL3Q4VX76 610 aa9.38□□□□□ -0.91
TARDBP-218ENST00000617172 CCDC38Q502W7 563 aa9.38□□□□□ -0.91
TARDBP-218ENST00000617172 PCID2Q5JVF3 399 aa9.38□□□□□ -0.91
TARDBP-218ENST00000617172 PTRH1Q86Y79 214 aaKnown RBP9.38□□□□□ -0.91
TARDBP-218ENST00000617172 GPR135Q8IZ08 494 aa9.38□□□□□ -0.91
TARDBP-218ENST00000617172 ADGRF3Q8IZF5 1079 aa9.38□□□□□ -0.91
TARDBP-218ENST00000617172 TAB3Q8N5C8 712 aaPredicted RBP9.38□□□□□ -0.91
TARDBP-218ENST00000617172 OR13J1Q8NGT2 312 aa9.38□□□□□ -0.91
TARDBP-218ENST00000617172 OR6P1Q8NGX9 317 aa9.38□□□□□ -0.91
TARDBP-218ENST00000617172 OR5K2Q8NHB8 316 aa9.38□□□□□ -0.91
TARDBP-218ENST00000617172 ASZ1Q8WWH4 475 aa9.38□□□□□ -0.91
TARDBP-218ENST00000617172 N4BP2L2Q92802 583 aaPredicted RBP9.38□□□□□ -0.91
TARDBP-218ENST00000617172 MR1Q95460 341 aa9.38□□□□□ -0.91
TARDBP-218ENST00000617172 CLIP3Q96DZ5 547 aa9.38□□□□□ -0.91
TARDBP-218ENST00000617172 TCTN2Q96GX1 697 aa9.38□□□□□ -0.91
TARDBP-218ENST00000617172 TRAPPC9Q96Q05 1148 aa9.38□□□□□ -0.91
TARDBP-218ENST00000617172 C17orf62Q9BQA9 187 aa9.38□□□□□ -0.91
TARDBP-218ENST00000617172 TLR10Q9BXR5 811 aa9.38□□□□□ -0.91
TARDBP-218ENST00000617172 NLNQ9BYT8 704 aa9.38□□□□□ -0.91
TARDBP-218ENST00000617172 SLC7A5P2Q9GIP4 190 aa9.38□□□□□ -0.91
TARDBP-218ENST00000617172 CHRNA10Q9GZZ6 450 aa9.38□□□□□ -0.91
TARDBP-218ENST00000617172 ZNF71Q9NQZ8 489 aaPredicted RBP9.38□□□□□ -0.91
TARDBP-218ENST00000617172 ACTR10Q9NZ32 417 aa9.38□□□□□ -0.91
TARDBP-218ENST00000617172 MAN2B2Q9Y2E5 1009 aa9.38□□□□□ -0.91
TARDBP-218ENST00000617172 PRSS21Q9Y6M0 314 aa9.38□□□□□ -0.91
TARDBP-218ENST00000617172 OR51F1A6NGY5 319 aa9.37□□□□□ -0.91
TARDBP-218ENST00000617172 TMEM150CB9EJG8 249 aa9.37□□□□□ -0.91
TARDBP-218ENST00000617172 BHMG1C9JSJ3 638 aaPredicted RBP9.37□□□□□ -0.91
TARDBP-218ENST00000617172 E7EQ34 232 aa9.37□□□□□ -0.91
TARDBP-218ENST00000617172 BTN3A1O00481 513 aa9.37□□□□□ -0.91
TARDBP-218ENST00000617172 KPNA5O15131 536 aa9.37□□□□□ -0.91
TARDBP-218ENST00000617172 NRDCO43847 1150 aa9.37□□□□□ -0.91
TARDBP-218ENST00000617172 GOT2P00505 430 aaKnown RBP9.37□□□□□ -0.91
TARDBP-218ENST00000617172 CD63P08962 238 aa9.37□□□□□ -0.91
TARDBP-218ENST00000617172 FURINP09958 794 aa9.37□□□□□ -0.91
TARDBP-218ENST00000617172 ST6GAL1P15907 406 aa9.37□□□□□ -0.91
TARDBP-218ENST00000617172 CYP2A7P20853 494 aa9.37□□□□□ -0.91
TARDBP-218ENST00000617172 AGXTP21549 392 aa9.37□□□□□ -0.91
TARDBP-218ENST00000617172 GRIA1P42261 906 aa9.37□□□□□ -0.91
TARDBP-218ENST00000617172 NPY2RP49146 381 aa9.37□□□□□ -0.91
TARDBP-218ENST00000617172 TTPAP49638 278 aa9.37□□□□□ -0.91
TARDBP-218ENST00000617172 ITGA1P56199 1179 aa9.37□□□□□ -0.91
TARDBP-218ENST00000617172 CDK16Q00536 496 aa9.37□□□□□ -0.91
TARDBP-218ENST00000617172 TLE1Q04724 770 aa9.37□□□□□ -0.91
TARDBP-218ENST00000617172 KLRB1Q12918 225 aa9.37□□□□□ -0.91
TARDBP-218ENST00000617172 GPS2Q13227 327 aa9.37□□□□□ -0.91
TARDBP-218ENST00000617172 DNAJC21Q5F1R6 531 aaKnown RBP9.37□□□□□ -0.91
TARDBP-218ENST00000617172 PLEKHS1Q5SXH7 462 aa9.37□□□□□ -0.91
TARDBP-218ENST00000617172 ATP1A1-AS1Q5TC04 95 aa9.37□□□□□ -0.91
TARDBP-218ENST00000617172 FAM199XQ6PEV8 388 aaPredicted RBP9.37□□□□□ -0.91
TARDBP-218ENST00000617172 FBXO38Q6PIJ6 1188 aa9.37□□□□□ -0.91
TARDBP-218ENST00000617172 SPESP1Q6UW49 350 aa9.37□□□□□ -0.91
TARDBP-218ENST00000617172 UNC5AQ6ZN44 842 aa9.37□□□□□ -0.91
TARDBP-218ENST00000617172 GSTA5Q7RTV2 222 aa9.37□□□□□ -0.91
TARDBP-218ENST00000617172 DSELQ8IZU8 1212 aa9.37□□□□□ -0.91
TARDBP-218ENST00000617172 SLC38A9Q8NBW4 561 aa9.37□□□□□ -0.91
TARDBP-218ENST00000617172 PPHLN1Q8NEY8 458 aaKnown RBP9.37□□□□□ -0.91
TARDBP-218ENST00000617172 TRIM58Q8NG06 486 aa9.37□□□□□ -0.91
TARDBP-218ENST00000617172 OR5AR1Q8NGP9 310 aa9.37□□□□□ -0.91
TARDBP-218ENST00000617172 SLC22A18Q96BI1 424 aa9.37□□□□□ -0.91
TARDBP-218ENST00000617172 PPM1MQ96MI6 270 aa9.37□□□□□ -0.91
TARDBP-218ENST00000617172 HGH1Q9BTY7 390 aa9.37□□□□□ -0.91
TARDBP-218ENST00000617172 CARD6Q9BX69 1037 aa9.37□□□□□ -0.91
TARDBP-218ENST00000617172 IL22Q9GZX6 179 aa9.37□□□□□ -0.91
TARDBP-218ENST00000617172 CHST8Q9H2A9 424 aa9.37□□□□□ -0.91
TARDBP-218ENST00000617172 ACTR5Q9H9F9 607 aaPredicted RBP9.37□□□□□ -0.91
TARDBP-218ENST00000617172 AKIRIN1Q9H9L7 192 aaPredicted RBP9.37□□□□□ -0.91
TARDBP-218ENST00000617172 EIF2B3Q9NR50 452 aaKnown RBP9.37□□□□□ -0.91
TARDBP-218ENST00000617172 BFARQ9NZS9 450 aa9.37□□□□□ -0.91
TARDBP-218ENST00000617172 TCAF1Q9Y4C2 921 aa9.37□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 67.1 ms