RNA–Protein interactions for RNA: ENST00000616395.4

TRAPPC3-209, Transcript of trafficking protein particle complex 3, humanhuman

TSL 3 BASIC

Gene TRAPPC3, Length 1,336 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC3-209ENST00000616395 ANKRD20A3Q5VUR7 823 aa17.19■□□□□ 0.34
TRAPPC3-209ENST00000616395 LRRC66Q68CR7 880 aa17.19■□□□□ 0.34
TRAPPC3-209ENST00000616395 USP45Q70EL2 814 aa17.19■□□□□ 0.34
TRAPPC3-209ENST00000616395 PID1Q7Z2X4 250 aa17.19■□□□□ 0.34
TRAPPC3-209ENST00000616395 BBS5Q8N3I7 341 aa17.19■□□□□ 0.34
TRAPPC3-209ENST00000616395 ADAMTS17Q8TE56 1095 aa17.19■□□□□ 0.34
TRAPPC3-209ENST00000616395 CPT1BQ92523 772 aa17.19■□□□□ 0.34
TRAPPC3-209ENST00000616395 RSC1A1Q92681 617 aa17.19■□□□□ 0.34
TRAPPC3-209ENST00000616395 LRRC39Q96DD0 335 aa17.19■□□□□ 0.34
TRAPPC3-209ENST00000616395 ZIM3Q96PE6 472 aa17.19■□□□□ 0.34
TRAPPC3-209ENST00000616395 SMIM14Q96QK8 99 aa17.19■□□□□ 0.34
TRAPPC3-209ENST00000616395 SMAD5Q99717 465 aaKnown RBP17.19■□□□□ 0.34
TRAPPC3-209ENST00000616395 MGME1Q9BQP7 344 aa17.19■□□□□ 0.34
TRAPPC3-209ENST00000616395 RIOK2Q9BVS4 552 aaKnown RBP17.19■□□□□ 0.34
TRAPPC3-209ENST00000616395 ROPN1BQ9BZX4 212 aaPredicted RBP17.19■□□□□ 0.34
TRAPPC3-209ENST00000616395 ROPN1Q9HAT0 212 aaPredicted RBP17.19■□□□□ 0.34
TRAPPC3-209ENST00000616395 SAYSD1Q9NPB0 183 aa17.19■□□□□ 0.34
TRAPPC3-209ENST00000616395 SCHIP1Q9P0W5 487 aaPredicted RBP17.19■□□□□ 0.34
TRAPPC3-209ENST00000616395 RARRES3Q9UL19 164 aa17.19■□□□□ 0.34
TRAPPC3-209ENST00000616395 TTC4O95801 387 aa17.18■□□□□ 0.34
TRAPPC3-209ENST00000616395 FOLR1P15328 257 aa17.18■□□□□ 0.34
TRAPPC3-209ENST00000616395 MAGEA4P43358 317 aa17.18■□□□□ 0.34
TRAPPC3-209ENST00000616395 RAPSNQ13702 412 aa17.18■□□□□ 0.34
TRAPPC3-209ENST00000616395 KCNAB1Q14722 419 aa17.18■□□□□ 0.34
TRAPPC3-209ENST00000616395 ZRSR2Q15696 482 aaKnown RBP17.18■□□□□ 0.34
TRAPPC3-209ENST00000616395 CEP85LQ5SZL2 805 aa17.18■□□□□ 0.34
TRAPPC3-209ENST00000616395 MARC1Q5VT66 337 aa17.18■□□□□ 0.34
TRAPPC3-209ENST00000616395 CYB5D1Q6P9G0 228 aa17.18■□□□□ 0.34
TRAPPC3-209ENST00000616395 ZNF765Q7L2R6 523 aa17.18■□□□□ 0.34
TRAPPC3-209ENST00000616395 NLRP8Q86W28 1048 aa17.18■□□□□ 0.34
TRAPPC3-209ENST00000616395 NAT8LQ8N9F0 302 aa17.18■□□□□ 0.34
TRAPPC3-209ENST00000616395 MCUQ8NE86 351 aa17.18■□□□□ 0.34
TRAPPC3-209ENST00000616395 NUDCD1Q96RS6 583 aa17.18■□□□□ 0.34
TRAPPC3-209ENST00000616395 CEP41Q9BYV8 373 aa17.18■□□□□ 0.34
TRAPPC3-209ENST00000616395 TXLNGYQ9BZA5 131 aa17.18■□□□□ 0.34
TRAPPC3-209ENST00000616395 EIF2B3Q9NR50 452 aaKnown RBP17.18■□□□□ 0.34
TRAPPC3-209ENST00000616395 B3GNT3Q9Y2A9 372 aa17.18■□□□□ 0.34
TRAPPC3-209ENST00000616395 A0A087WUV0 522 aaPredicted RBP17.17■□□□□ 0.34
TRAPPC3-209ENST00000616395 HMGB1P1B2RPK0 211 aaPredicted RBP17.17■□□□□ 0.34
TRAPPC3-209ENST00000616395 KCNK1O00180 336 aa17.17■□□□□ 0.34
TRAPPC3-209ENST00000616395 LRRTM2O43300 516 aa17.17■□□□□ 0.34
TRAPPC3-209ENST00000616395 RIPK2O43353 540 aa17.17■□□□□ 0.34
TRAPPC3-209ENST00000616395 PGLSO95336 258 aa17.17■□□□□ 0.34
TRAPPC3-209ENST00000616395 VIPP01282 170 aa17.17■□□□□ 0.34
TRAPPC3-209ENST00000616395 HLA-DQB2P05538 268 aa17.17■□□□□ 0.34
TRAPPC3-209ENST00000616395 PYGLP06737 847 aa17.17■□□□□ 0.34
TRAPPC3-209ENST00000616395 APRTP07741 180 aa17.17■□□□□ 0.34
TRAPPC3-209ENST00000616395 MAGEA6P43360 314 aa17.17■□□□□ 0.34
TRAPPC3-209ENST00000616395 PDE1BQ01064 536 aa17.17■□□□□ 0.34
TRAPPC3-209ENST00000616395 DSC2Q02487 901 aa17.17■□□□□ 0.34
TRAPPC3-209ENST00000616395 PTSQ03393 145 aa17.17■□□□□ 0.34
TRAPPC3-209ENST00000616395 ITKQ08881 620 aa17.17■□□□□ 0.34
TRAPPC3-209ENST00000616395 PDIA2Q13087 525 aaKnown RBP17.17■□□□□ 0.34
TRAPPC3-209ENST00000616395 IHHQ14623 411 aa17.17■□□□□ 0.34
TRAPPC3-209ENST00000616395 PHYKPLQ8IUZ5 450 aa17.17■□□□□ 0.34
TRAPPC3-209ENST00000616395 PALM2Q8IXS6 379 aa17.17■□□□□ 0.34
TRAPPC3-209ENST00000616395 GLIS1Q8NBF1 620 aa17.17■□□□□ 0.34
TRAPPC3-209ENST00000616395 CCDC110Q8TBZ0 833 aa17.17■□□□□ 0.34
TRAPPC3-209ENST00000616395 PYROXD1Q8WU10 500 aa17.17■□□□□ 0.34
TRAPPC3-209ENST00000616395 MAML1Q92585 1016 aa17.17■□□□□ 0.34
TRAPPC3-209ENST00000616395 MR1Q95460 341 aa17.17■□□□□ 0.34
TRAPPC3-209ENST00000616395 FCRL4Q96PJ5 515 aa17.17■□□□□ 0.34
TRAPPC3-209ENST00000616395 CDC42EP4Q9H3Q1 356 aaKnown RBP17.17■□□□□ 0.34
TRAPPC3-209ENST00000616395 C10orf88Q9H8K7 445 aa17.17■□□□□ 0.34
TRAPPC3-209ENST00000616395 FAM53CQ9NYF3 392 aa17.17■□□□□ 0.34
TRAPPC3-209ENST00000616395 ZNF624Q9P2J8 865 aaPredicted RBP17.17■□□□□ 0.34
TRAPPC3-209ENST00000616395 CNOT6Q9ULM6 557 aaKnown RBP17.17■□□□□ 0.34
TRAPPC3-209ENST00000616395 PPIL1Q9Y3C6 166 aa17.17■□□□□ 0.34
TRAPPC3-209ENST00000616395 COPG1Q9Y678 874 aaKnown RBP17.17■□□□□ 0.34
TRAPPC3-209ENST00000616395 PRSS44E7EML9 344 aa17.16■□□□□ 0.34
TRAPPC3-209ENST00000616395 F5H423 210 aaPredicted RBP17.16■□□□□ 0.34
TRAPPC3-209ENST00000616395 MATN3O15232 486 aa17.16■□□□□ 0.34
TRAPPC3-209ENST00000616395 ZG16O60844 167 aa17.16■□□□□ 0.34
TRAPPC3-209ENST00000616395 ABHD2P08910 425 aa17.16■□□□□ 0.34
TRAPPC3-209ENST00000616395 GSTA2P09210 222 aa17.16■□□□□ 0.34
TRAPPC3-209ENST00000616395 XRCC1P18887 633 aaPredicted RBP17.16■□□□□ 0.34
TRAPPC3-209ENST00000616395 SLC19A1P41440 591 aa17.16■□□□□ 0.34
TRAPPC3-209ENST00000616395 CAPZBP47756 277 aa17.16■□□□□ 0.34
TRAPPC3-209ENST00000616395 PER3P56645 1201 aa17.16■□□□□ 0.34
TRAPPC3-209ENST00000616395 ZBTB17Q13105 803 aa17.16■□□□□ 0.34
TRAPPC3-209ENST00000616395 KRT71Q3SY84 523 aa17.16■□□□□ 0.34
TRAPPC3-209ENST00000616395 CRB2Q5IJ48 1285 aa17.16■□□□□ 0.34
TRAPPC3-209ENST00000616395 ARMC12Q5T9G4 340 aa17.16■□□□□ 0.34
TRAPPC3-209ENST00000616395 FAM69BQ5VUD6 431 aa17.16■□□□□ 0.34
TRAPPC3-209ENST00000616395 IRGCQ6NXR0 463 aa17.16■□□□□ 0.34
TRAPPC3-209ENST00000616395 TRIM48Q8IWZ4 208 aa17.16■□□□□ 0.34
TRAPPC3-209ENST00000616395 TEX26Q8N6G2 289 aa17.16■□□□□ 0.34
TRAPPC3-209ENST00000616395 SIDT2Q8NBJ9 832 aaKnown RBP17.16■□□□□ 0.34
TRAPPC3-209ENST00000616395 PIH1D2Q8WWB5 315 aa17.16■□□□□ 0.34
TRAPPC3-209ENST00000616395 FATE1Q969F0 183 aa17.16■□□□□ 0.34
TRAPPC3-209ENST00000616395 ZDHHC12Q96GR4 267 aa17.16■□□□□ 0.34
TRAPPC3-209ENST00000616395 BARD1Q99728 777 aaKnown RBP17.16■□□□□ 0.34
TRAPPC3-209ENST00000616395 OSGEPL1Q9H4B0 414 aa17.16■□□□□ 0.34
TRAPPC3-209ENST00000616395 RUBCNLQ9H714 662 aa17.16■□□□□ 0.34
TRAPPC3-209ENST00000616395 RMI1Q9H9A7 625 aa17.16■□□□□ 0.34
TRAPPC3-209ENST00000616395 RBM22Q9NW64 420 aaKnown RBP eCLIP17.16■□□□□ 0.34
TRAPPC3-209ENST00000616395 RSPH14Q9UHP6 348 aa17.16■□□□□ 0.34
TRAPPC3-209ENST00000616395 ITGB1BP2Q9UKP3 347 aa17.16■□□□□ 0.34
TRAPPC3-209ENST00000616395 NTNG1Q9Y2I2 539 aa17.16■□□□□ 0.34
TRAPPC3-209ENST00000616395 AAR2Q9Y312 384 aaKnown RBP17.16■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms