RNA–Protein interactions for RNA: ENST00000616288.4

PPP4R3B-205, Transcript of protein phosphatase 4 regulatory subunit 3B, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene PPP4R3B, Length 4,310 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R3B-205ENST00000616288 INTS5Q6P9B9 1019 aaKnown RBP13.33□□□□□ -0.28
PPP4R3B-205ENST00000616288 KCTD20Q7Z5Y7 419 aa13.33□□□□□ -0.28
PPP4R3B-205ENST00000616288 ANKRD46Q86W74 232 aa13.33□□□□□ -0.28
PPP4R3B-205ENST00000616288 PIGKQ92643 395 aa13.33□□□□□ -0.28
PPP4R3B-205ENST00000616288 TTLL2Q9BWV7 592 aa13.33□□□□□ -0.28
PPP4R3B-205ENST00000616288 COL20A1Q9P218 1284 aa13.33□□□□□ -0.28
PPP4R3B-205ENST00000616288 TMCC3Q9ULS5 477 aa13.33□□□□□ -0.28
PPP4R3B-205ENST00000616288 SGCEO43556 437 aa13.32□□□□□ -0.28
PPP4R3B-205ENST00000616288 ZNF780AO75290 641 aaPredicted RBP13.32□□□□□ -0.28
PPP4R3B-205ENST00000616288 HNMTP50135 292 aa13.32□□□□□ -0.28
PPP4R3B-205ENST00000616288 MZT2AQ6P582 158 aa13.32□□□□□ -0.28
PPP4R3B-205ENST00000616288 DGLUCYQ7Z3D6 616 aa13.32□□□□□ -0.28
PPP4R3B-205ENST00000616288 OR6F1Q8NGZ6 308 aa13.32□□□□□ -0.28
PPP4R3B-205ENST00000616288 FCRL3Q96P31 734 aaPredicted RBP13.32□□□□□ -0.28
PPP4R3B-205ENST00000616288 IFT46Q9NQC8 304 aa13.32□□□□□ -0.28
PPP4R3B-205ENST00000616288 STMND1H3BQB6 276 aa13.32□□□□□ -0.28
PPP4R3B-205ENST00000616288 SCO2O43819 266 aa13.32□□□□□ -0.28
PPP4R3B-205ENST00000616288 PEX14O75381 377 aa13.32□□□□□ -0.28
PPP4R3B-205ENST00000616288 STSP08842 583 aa13.32□□□□□ -0.28
PPP4R3B-205ENST00000616288 CFL1P23528 166 aaKnown RBP13.32□□□□□ -0.28
PPP4R3B-205ENST00000616288 AP2S1P53680 142 aaPredicted RBP13.32□□□□□ -0.28
PPP4R3B-205ENST00000616288 GP2P55259 537 aaKnown RBP13.32□□□□□ -0.28
PPP4R3B-205ENST00000616288 BAATQ14032 418 aaPredicted RBP13.32□□□□□ -0.28
PPP4R3B-205ENST00000616288 GNASQ5JWF2 1037 aa13.32□□□□□ -0.28
PPP4R3B-205ENST00000616288 LRRC66Q68CR7 880 aa13.32□□□□□ -0.28
PPP4R3B-205ENST00000616288 B3GALNT2Q8NCR0 500 aa13.32□□□□□ -0.28
PPP4R3B-205ENST00000616288 ZNF416Q9BWM5 594 aa13.32□□□□□ -0.28
PPP4R3B-205ENST00000616288 HMX2A2RU54 273 aa13.32□□□□□ -0.28
PPP4R3B-205ENST00000616288 FAM155AB1AL88 458 aaPredicted RBP13.32□□□□□ -0.28
PPP4R3B-205ENST00000616288 DLGAP1O14490 977 aa13.32□□□□□ -0.28
PPP4R3B-205ENST00000616288 PLSCR1O15162 318 aa13.32□□□□□ -0.28
PPP4R3B-205ENST00000616288 GLP2RO95838 553 aa13.32□□□□□ -0.28
PPP4R3B-205ENST00000616288 VIPP01282 170 aa13.32□□□□□ -0.28
PPP4R3B-205ENST00000616288 HSD17B1P14061 328 aa13.32□□□□□ -0.28
PPP4R3B-205ENST00000616288 GLULP15104 373 aa13.32□□□□□ -0.28
PPP4R3B-205ENST00000616288 DNASE1P24855 282 aa13.32□□□□□ -0.28
PPP4R3B-205ENST00000616288 STOMP27105 288 aa13.32□□□□□ -0.28
PPP4R3B-205ENST00000616288 TNFSF8P32971 234 aa13.32□□□□□ -0.28
PPP4R3B-205ENST00000616288 NUDT1P36639 197 aa13.32□□□□□ -0.28
PPP4R3B-205ENST00000616288 TPMTP51580 245 aa13.32□□□□□ -0.28
PPP4R3B-205ENST00000616288 GALNT3Q14435 633 aa13.32□□□□□ -0.28
PPP4R3B-205ENST00000616288 CCDC157Q569K6 752 aa13.32□□□□□ -0.28
PPP4R3B-205ENST00000616288 ENPP6Q6UWR7 440 aa13.32□□□□□ -0.28
PPP4R3B-205ENST00000616288 TRPV1Q8NER1 839 aa13.32□□□□□ -0.28
PPP4R3B-205ENST00000616288 RDH12Q96NR8 316 aa13.32□□□□□ -0.28
PPP4R3B-205ENST00000616288 DOK1Q99704 481 aa13.32□□□□□ -0.28
PPP4R3B-205ENST00000616288 SORBS1Q9BX66 1292 aaKnown RBP13.32□□□□□ -0.28
PPP4R3B-205ENST00000616288 PAK6Q9NQU5 681 aaPredicted RBP13.32□□□□□ -0.28
PPP4R3B-205ENST00000616288 REV1Q9UBZ9 1251 aa13.32□□□□□ -0.28
PPP4R3B-205ENST00000616288 USP22Q9UPT9 525 aa13.32□□□□□ -0.28
PPP4R3B-205ENST00000616288 MAN2B2Q9Y2E5 1009 aa13.32□□□□□ -0.28
PPP4R3B-205ENST00000616288 CMAHPQ9Y471 501 aa13.32□□□□□ -0.28
PPP4R3B-205ENST00000616288 DIP2BQ9P265 1576 aa13.32□□□□□ -0.28
PPP4R3B-205ENST00000616288 MID1O15344 667 aa13.32□□□□□ -0.28
PPP4R3B-205ENST00000616288 LRATO95237 230 aa13.32□□□□□ -0.28
PPP4R3B-205ENST00000616288 CACNB2Q08289 660 aaPredicted RBP13.32□□□□□ -0.28
PPP4R3B-205ENST00000616288 RAB6CQ53S08 254 aa13.32□□□□□ -0.28
PPP4R3B-205ENST00000616288 BRMS1LQ5PSV4 323 aa13.32□□□□□ -0.28
PPP4R3B-205ENST00000616288 MSANTD2Q6P1R3 559 aa13.32□□□□□ -0.28
PPP4R3B-205ENST00000616288 IKBIPQ70UQ0 350 aa13.32□□□□□ -0.28
PPP4R3B-205ENST00000616288 MEIOBQ8N635 442 aa13.32□□□□□ -0.28
PPP4R3B-205ENST00000616288 ANKRD53Q8N9V6 530 aa13.32□□□□□ -0.28
PPP4R3B-205ENST00000616288 CEP76Q8TAP6 659 aa13.32□□□□□ -0.28
PPP4R3B-205ENST00000616288 EXOC2Q96KP1 924 aa13.32□□□□□ -0.28
PPP4R3B-205ENST00000616288 MND1Q9BWT6 205 aa13.32□□□□□ -0.28
PPP4R3B-205ENST00000616288 RAB6CQ9H0N0 254 aa13.32□□□□□ -0.28
PPP4R3B-205ENST00000616288 FBXO8Q9NRD0 319 aa13.32□□□□□ -0.28
PPP4R3B-205ENST00000616288 CIB4A0PJX0 185 aa13.31□□□□□ -0.28
PPP4R3B-205ENST00000616288 NCAM2O15394 837 aa13.31□□□□□ -0.28
PPP4R3B-205ENST00000616288 ELOAQ14241 798 aaKnown RBP13.31□□□□□ -0.28
PPP4R3B-205ENST00000616288 FGD2Q7Z6J4 655 aa13.31□□□□□ -0.28
PPP4R3B-205ENST00000616288 IFT22Q9H7X7 185 aa13.31□□□□□ -0.28
PPP4R3B-205ENST00000616288 RNF146Q9NTX7 359 aa13.31□□□□□ -0.28
PPP4R3B-205ENST00000616288 WWOXQ9NZC7 414 aa13.31□□□□□ -0.28
PPP4R3B-205ENST00000616288 RFPL3O75679 317 aa13.31□□□□□ -0.28
PPP4R3B-205ENST00000616288 C1RP00736 705 aa13.31□□□□□ -0.28
PPP4R3B-205ENST00000616288 GSTM1P09488 218 aa13.31□□□□□ -0.28
PPP4R3B-205ENST00000616288 TSPAN5P62079 268 aa13.31□□□□□ -0.28
PPP4R3B-205ENST00000616288 SPIBQ01892 262 aa13.31□□□□□ -0.28
PPP4R3B-205ENST00000616288 CSTF1Q05048 431 aaKnown RBP13.31□□□□□ -0.28
PPP4R3B-205ENST00000616288 HNRNPA0Q13151 305 aaKnown RBP13.31□□□□□ -0.28
PPP4R3B-205ENST00000616288 VEPH1Q14D04 833 aa13.31□□□□□ -0.28
PPP4R3B-205ENST00000616288 FAM187BQ17R55 369 aa13.31□□□□□ -0.28
PPP4R3B-205ENST00000616288 AP5B1Q2VPB7 878 aa13.31□□□□□ -0.28
PPP4R3B-205ENST00000616288 HAGHLQ6PII5 290 aaPredicted RBP13.31□□□□□ -0.28
PPP4R3B-205ENST00000616288 SPATA19Q7Z5L4 167 aa13.31□□□□□ -0.28
PPP4R3B-205ENST00000616288 SPRED1Q7Z699 444 aa13.31□□□□□ -0.28
PPP4R3B-205ENST00000616288 ZNF598Q86UK7 904 aaKnown RBP13.31□□□□□ -0.28
PPP4R3B-205ENST00000616288 MICALL2Q8IY33 904 aa13.31□□□□□ -0.28
PPP4R3B-205ENST00000616288 MINDY1Q8N5J2 469 aa13.31□□□□□ -0.28
PPP4R3B-205ENST00000616288 PCDHB14Q9Y5E9 798 aa13.31□□□□□ -0.28
PPP4R3B-205ENST00000616288 SLIT3O75094 1523 aa13.31□□□□□ -0.28
PPP4R3B-205ENST00000616288 A0A096LPI6 279 aa13.31□□□□□ -0.28
PPP4R3B-205ENST00000616288 ARVCFO00192 962 aa13.31□□□□□ -0.28
PPP4R3B-205ENST00000616288 PITPNM1O00562 1244 aa13.31□□□□□ -0.28
PPP4R3B-205ENST00000616288 KPNA5O15131 536 aa13.31□□□□□ -0.28
PPP4R3B-205ENST00000616288 AP2A1O95782 977 aa13.31□□□□□ -0.28
PPP4R3B-205ENST00000616288 C21orf33P30042 268 aaPredicted RBP13.31□□□□□ -0.28
PPP4R3B-205ENST00000616288 SLC16A1P53985 500 aa13.31□□□□□ -0.28
PPP4R3B-205ENST00000616288 CSNK2BP67870 215 aa13.31□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 41.9 ms