RNA–Protein interactions for RNA: ENST00000616154.1

CDX1-202, Transcript of caudal type homeobox 1, humanhuman

TSL 1 (best) BASIC

Gene CDX1, Length 1,343 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDX1-202ENST00000616154 CRLS1Q9UJA2 301 aa18.42■□□□□ 0.54
CDX1-202ENST00000616154 POMT2Q9UKY4 750 aa18.42■□□□□ 0.54
CDX1-202ENST00000616154 FARSAQ9Y285 508 aaKnown RBP18.42■□□□□ 0.54
CDX1-202ENST00000616154 HEBP2Q9Y5Z4 205 aa18.42■□□□□ 0.54
CDX1-202ENST00000616154 MATN2O00339 956 aa18.41■□□□□ 0.54
CDX1-202ENST00000616154 POLBP06746 335 aa18.41■□□□□ 0.54
CDX1-202ENST00000616154 GP1BBP13224 206 aa18.41■□□□□ 0.54
CDX1-202ENST00000616154 ITGALP20701 1170 aa18.41■□□□□ 0.54
CDX1-202ENST00000616154 CXCR5P32302 372 aa18.41■□□□□ 0.54
CDX1-202ENST00000616154 ARCN1P48444 511 aaKnown RBP18.41■□□□□ 0.54
CDX1-202ENST00000616154 PRKAA1Q13131 559 aa18.41■□□□□ 0.54
CDX1-202ENST00000616154 CPZQ66K79 652 aa18.41■□□□□ 0.54
CDX1-202ENST00000616154 LILRA3Q8N6C8 439 aaPredicted RBP18.41■□□□□ 0.54
CDX1-202ENST00000616154 SLC38A9Q8NBW4 561 aa18.41■□□□□ 0.54
CDX1-202ENST00000616154 ACVR1CQ8NER5 493 aa18.41■□□□□ 0.54
CDX1-202ENST00000616154 STYXQ8WUJ0 223 aa18.41■□□□□ 0.54
CDX1-202ENST00000616154 C1orf54Q8WWF1 131 aa18.41■□□□□ 0.54
CDX1-202ENST00000616154 DNAJC1Q96KC8 554 aaKnown RBP18.41■□□□□ 0.54
CDX1-202ENST00000616154 PPM1MQ96MI6 270 aa18.41■□□□□ 0.54
CDX1-202ENST00000616154 FANCEQ9HB96 536 aa18.41■□□□□ 0.54
CDX1-202ENST00000616154 ETNK1Q9HBU6 452 aa18.41■□□□□ 0.54
CDX1-202ENST00000616154 C1GALT1Q9NS00 363 aa18.41■□□□□ 0.54
CDX1-202ENST00000616154 RIMKLBQ9ULI2 386 aa18.41■□□□□ 0.54
CDX1-202ENST00000616154 ZNF148Q9UQR1 794 aa18.41■□□□□ 0.54
CDX1-202ENST00000616154 DRG1Q9Y295 367 aaKnown RBP18.41■□□□□ 0.54
CDX1-202ENST00000616154 PCDHGA9Q9Y5G4 932 aaKnown RBP18.41■□□□□ 0.54
CDX1-202ENST00000616154 NBPF19A0A087WUL8 3843 aa18.4■□□□□ 0.54
CDX1-202ENST00000616154 C17orf113A0A1B0GUU1 675 aa18.4■□□□□ 0.54
CDX1-202ENST00000616154 CFAP99D6REC4 459 aa18.4■□□□□ 0.54
CDX1-202ENST00000616154 KLK3P07288 261 aaPredicted RBP18.4■□□□□ 0.54
CDX1-202ENST00000616154 POLR2CP19387 275 aaPredicted RBP18.4■□□□□ 0.54
CDX1-202ENST00000616154 CDH17Q12864 832 aa18.4■□□□□ 0.54
CDX1-202ENST00000616154 KRT33BQ14525 404 aa18.4■□□□□ 0.54
CDX1-202ENST00000616154 ZNF658BQ4V348 819 aaPredicted RBP18.4■□□□□ 0.54
CDX1-202ENST00000616154 FBXO38Q6PIJ6 1188 aa18.4■□□□□ 0.54
CDX1-202ENST00000616154 CREG2Q8IUH2 290 aa18.4■□□□□ 0.54
CDX1-202ENST00000616154 OR4E2Q8NGC2 313 aa18.4■□□□□ 0.54
CDX1-202ENST00000616154 ACTRT1Q8TDG2 376 aa18.4■□□□□ 0.54
CDX1-202ENST00000616154 MAIP1Q8WWC4 291 aa18.4■□□□□ 0.54
CDX1-202ENST00000616154 CPT1BQ92523 772 aa18.4■□□□□ 0.54
CDX1-202ENST00000616154 COPS8Q99627 209 aa18.4■□□□□ 0.54
CDX1-202ENST00000616154 CHST8Q9H2A9 424 aa18.4■□□□□ 0.54
CDX1-202ENST00000616154 SYTL2Q9HCH5 934 aa18.4■□□□□ 0.54
CDX1-202ENST00000616154 MLXIPLQ9NP71 852 aa18.4■□□□□ 0.54
CDX1-202ENST00000616154 PAK5Q9P286 719 aa18.4■□□□□ 0.54
CDX1-202ENST00000616154 SHANK1Q9Y566 2161 aa18.39■□□□□ 0.53
CDX1-202ENST00000616154 ARGFXA6NJG6 315 aa18.39■□□□□ 0.53
CDX1-202ENST00000616154 SLC9B1P1A6NJY1 282 aa18.39■□□□□ 0.53
CDX1-202ENST00000616154 MEN1O00255 615 aa18.39■□□□□ 0.53
CDX1-202ENST00000616154 RAB40ALP0C0E4 278 aa18.39■□□□□ 0.53
CDX1-202ENST00000616154 MSL3P1P0C860 447 aa18.39■□□□□ 0.53
CDX1-202ENST00000616154 ATP1B2P14415 290 aaPredicted RBP18.39■□□□□ 0.53
CDX1-202ENST00000616154 CDH3P22223 829 aa18.39■□□□□ 0.53
CDX1-202ENST00000616154 MC4RP32245 332 aa18.39■□□□□ 0.53
CDX1-202ENST00000616154 RORAP35398 523 aa18.39■□□□□ 0.53
CDX1-202ENST00000616154 PGDP52209 483 aa18.39■□□□□ 0.53
CDX1-202ENST00000616154 ABRQ12979 859 aa18.39■□□□□ 0.53
CDX1-202ENST00000616154 CHAF1BQ13112 559 aa18.39■□□□□ 0.53
CDX1-202ENST00000616154 POU6F1Q14863 301 aa18.39■□□□□ 0.53
CDX1-202ENST00000616154 PLEKHS1Q5SXH7 462 aa18.39■□□□□ 0.53
CDX1-202ENST00000616154 DSELQ8IZU8 1212 aa18.39■□□□□ 0.53
CDX1-202ENST00000616154 GLIS1Q8NBF1 620 aa18.39■□□□□ 0.53
CDX1-202ENST00000616154 ADAMTS17Q8TE56 1095 aa18.39■□□□□ 0.53
CDX1-202ENST00000616154 CDKN2AIPNLQ96HQ2 116 aa18.39■□□□□ 0.53
CDX1-202ENST00000616154 RANBP9Q96S59 729 aa18.39■□□□□ 0.53
CDX1-202ENST00000616154 SLC25A23Q9BV35 468 aa18.39■□□□□ 0.53
CDX1-202ENST00000616154 ING2Q9H160 280 aa18.39■□□□□ 0.53
CDX1-202ENST00000616154 COG4Q9H9E3 785 aa18.39■□□□□ 0.53
CDX1-202ENST00000616154 ACSS2Q9NR19 701 aa18.39■□□□□ 0.53
CDX1-202ENST00000616154 RNF14Q9UBS8 474 aa18.39■□□□□ 0.53
CDX1-202ENST00000616154 UTP20O75691 2785 aaKnown RBP18.38■□□□□ 0.53
CDX1-202ENST00000616154 PRRC2CQ9Y520 2896 aaKnown RBP18.38■□□□□ 0.53
CDX1-202ENST00000616154 ZNF185O15231 689 aa18.38■□□□□ 0.53
CDX1-202ENST00000616154 IFNB1P01574 187 aa18.38■□□□□ 0.53
CDX1-202ENST00000616154 TPH1P17752 444 aa18.38■□□□□ 0.53
CDX1-202ENST00000616154 ACRV1P26436 265 aa18.38■□□□□ 0.53
CDX1-202ENST00000616154 TMPRSS15P98073 1019 aa18.38■□□□□ 0.53
CDX1-202ENST00000616154 ACVR1Q04771 509 aa18.38■□□□□ 0.53
CDX1-202ENST00000616154 ZNF789Q5FWF6 425 aa18.38■□□□□ 0.53
CDX1-202ENST00000616154 PRAMEF17Q5VTA0 474 aa18.38■□□□□ 0.53
CDX1-202ENST00000616154 C4orf22Q6V702 233 aa18.38■□□□□ 0.53
CDX1-202ENST00000616154 ENDOVQ8N8Q3 282 aaKnown RBP18.38■□□□□ 0.53
CDX1-202ENST00000616154 OR52K1Q8NGK4 314 aa18.38■□□□□ 0.53
CDX1-202ENST00000616154 LCN9Q8WX39 176 aa18.38■□□□□ 0.53
CDX1-202ENST00000616154 PEX13Q92968 403 aa18.38■□□□□ 0.53
CDX1-202ENST00000616154 PSMG3-AS1Q96PY0 264 aa18.38■□□□□ 0.53
CDX1-202ENST00000616154 PITPNM3Q9BZ71 974 aa18.38■□□□□ 0.53
CDX1-202ENST00000616154 OR52A5Q9H2C5 316 aa18.38■□□□□ 0.53
CDX1-202ENST00000616154 SRMSQ9H3Y6 488 aa18.38■□□□□ 0.53
CDX1-202ENST00000616154 FAM96AQ9H5X1 160 aa18.38■□□□□ 0.53
CDX1-202ENST00000616154 CASS4Q9NQ75 786 aa18.38■□□□□ 0.53
CDX1-202ENST00000616154 EIF2B3Q9NR50 452 aaKnown RBP18.38■□□□□ 0.53
CDX1-202ENST00000616154 ZDHHC3Q9NYG2 299 aa18.38■□□□□ 0.53
CDX1-202ENST00000616154 SNX7Q9UNH6 387 aa18.38■□□□□ 0.53
CDX1-202ENST00000616154 ICE1Q9Y2F5 2266 aa18.37■□□□□ 0.53
CDX1-202ENST00000616154 FER1L5A0AVI2 2057 aa18.37■□□□□ 0.53
CDX1-202ENST00000616154 GSAPA4D1B5 854 aa18.37■□□□□ 0.53
CDX1-202ENST00000616154 CCL22O00626 93 aa18.37■□□□□ 0.53
CDX1-202ENST00000616154 CEP104O60308 925 aa18.37■□□□□ 0.53
CDX1-202ENST00000616154 FGGP02679 453 aa18.37■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms