RNA–Protein interactions for RNA: ENST00000613856.4

SLIRP-212, Transcript of SRA stem-loop interacting RNA binding protein, humanhuman

APPRIS ALT1 TSL 2 BASIC

Gene SLIRP, Length 420 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLIRP-212ENST00000613856 HTR1BP28222 390 aa11.19□□□□□ -0.62
SLIRP-212ENST00000613856 MAPK9P45984 424 aa11.19□□□□□ -0.62
SLIRP-212ENST00000613856 GLRBP48167 497 aa11.19□□□□□ -0.62
SLIRP-212ENST00000613856 CLDN2P57739 230 aa11.19□□□□□ -0.62
SLIRP-212ENST00000613856 NFKB2Q00653 900 aa11.19□□□□□ -0.62
SLIRP-212ENST00000613856 GUCY1A3Q02108 690 aa11.19□□□□□ -0.62
SLIRP-212ENST00000613856 DMPKQ09013 629 aa11.19□□□□□ -0.62
SLIRP-212ENST00000613856 SP140Q13342 867 aa11.19□□□□□ -0.62
SLIRP-212ENST00000613856 BOP1Q14137 746 aaKnown RBP11.19□□□□□ -0.62
SLIRP-212ENST00000613856 PCLAFQ15004 111 aa11.19□□□□□ -0.62
SLIRP-212ENST00000613856 PDK4Q16654 411 aa11.19□□□□□ -0.62
SLIRP-212ENST00000613856 SYTL3Q4VX76 610 aa11.19□□□□□ -0.62
SLIRP-212ENST00000613856 DOK6Q6PKX4 331 aa11.19□□□□□ -0.62
SLIRP-212ENST00000613856 CRTC3Q6UUV7 619 aa11.19□□□□□ -0.62
SLIRP-212ENST00000613856 ZYG11AQ6WRX3 759 aa11.19□□□□□ -0.62
SLIRP-212ENST00000613856 RGS9BPQ6ZS82 235 aa11.19□□□□□ -0.62
SLIRP-212ENST00000613856 GLRX5Q86SX6 157 aa11.19□□□□□ -0.62
SLIRP-212ENST00000613856 RASGRP3Q8IV61 690 aa11.19□□□□□ -0.62
SLIRP-212ENST00000613856 SPATA6LQ8N4H0 392 aa11.19□□□□□ -0.62
SLIRP-212ENST00000613856 CCDC63Q8NA47 563 aa11.19□□□□□ -0.62
SLIRP-212ENST00000613856 OR2L2Q8NH16 312 aa11.19□□□□□ -0.62
SLIRP-212ENST00000613856 RAB3IL1Q8TBN0 382 aa11.19□□□□□ -0.62
SLIRP-212ENST00000613856 STAG3L4Q8TBR4 150 aa11.19□□□□□ -0.62
SLIRP-212ENST00000613856 DYDC1Q8WWB3 177 aa11.19□□□□□ -0.62
SLIRP-212ENST00000613856 WDR92Q96MX6 357 aa11.19□□□□□ -0.62
SLIRP-212ENST00000613856 ATOH8Q96SQ7 321 aa11.19□□□□□ -0.62
SLIRP-212ENST00000613856 TIMM29Q9BSF4 260 aa11.19□□□□□ -0.62
SLIRP-212ENST00000613856 CAPS2Q9BXY5 557 aa11.19□□□□□ -0.62
SLIRP-212ENST00000613856 ALG9Q9H6U8 611 aa11.19□□□□□ -0.62
SLIRP-212ENST00000613856 COG4Q9H9E3 785 aa11.19□□□□□ -0.62
SLIRP-212ENST00000613856 SIRPGQ9P1W8 387 aa11.19□□□□□ -0.62
SLIRP-212ENST00000613856 GULP1Q9UBP9 304 aa11.19□□□□□ -0.62
SLIRP-212ENST00000613856 CABIN1Q9Y6J0 2220 aa11.19□□□□□ -0.62
SLIRP-212ENST00000613856 A0A087WV48 116 aa11.18□□□□□ -0.62
SLIRP-212ENST00000613856 PRSS38A1L453 326 aa11.18□□□□□ -0.62
SLIRP-212ENST00000613856 NPEPPSL1A6NEC2 478 aa11.18□□□□□ -0.62
SLIRP-212ENST00000613856 TMEM202A6NGA9 273 aa11.18□□□□□ -0.62
SLIRP-212ENST00000613856 SYCE1LA8MT33 242 aa11.18□□□□□ -0.62
SLIRP-212ENST00000613856 MEI4A8MW99 385 aa11.18□□□□□ -0.62
SLIRP-212ENST00000613856 H0Y8X5 98 aa11.18□□□□□ -0.62
SLIRP-212ENST00000613856 PYCARD-AS1I3L0S3 204 aa11.18□□□□□ -0.62
SLIRP-212ENST00000613856 BTN3A1O00481 513 aa11.18□□□□□ -0.62
SLIRP-212ENST00000613856 KLF11O14901 512 aa11.18□□□□□ -0.62
SLIRP-212ENST00000613856 POP7O75817 140 aaKnown RBP11.18□□□□□ -0.62
SLIRP-212ENST00000613856 DKK1O94907 266 aa11.18□□□□□ -0.62
SLIRP-212ENST00000613856 MYL2P10916 166 aa11.18□□□□□ -0.62
SLIRP-212ENST00000613856 PLA2G2AP14555 144 aa11.18□□□□□ -0.62
SLIRP-212ENST00000613856 CPA3P15088 417 aa11.18□□□□□ -0.62
SLIRP-212ENST00000613856 TAC1P20366 129 aa11.18□□□□□ -0.62
SLIRP-212ENST00000613856 ATP5F1P24539 256 aaPredicted RBP11.18□□□□□ -0.62
SLIRP-212ENST00000613856 DPP6P42658 865 aa11.18□□□□□ -0.62
SLIRP-212ENST00000613856 PRKAA2P54646 552 aa11.18□□□□□ -0.62
SLIRP-212ENST00000613856 HSPA14Q0VDF9 509 aa11.18□□□□□ -0.62
SLIRP-212ENST00000613856 RPA4Q13156 261 aa11.18□□□□□ -0.62
SLIRP-212ENST00000613856 SLC14A1Q13336 389 aa11.18□□□□□ -0.62
SLIRP-212ENST00000613856 OR4D1Q15615 310 aa11.18□□□□□ -0.62
SLIRP-212ENST00000613856 TSNQ15631 228 aaKnown RBP11.18□□□□□ -0.62
SLIRP-212ENST00000613856 PYCR3Q53H96 274 aa11.18□□□□□ -0.62
SLIRP-212ENST00000613856 CCDC157Q569K6 752 aa11.18□□□□□ -0.62
SLIRP-212ENST00000613856 LAYNQ6UX15 382 aa11.18□□□□□ -0.62
SLIRP-212ENST00000613856 XKR5Q6UX68 686 aa11.18□□□□□ -0.62
SLIRP-212ENST00000613856 CYHR1Q6ZMK1 362 aa11.18□□□□□ -0.62
SLIRP-212ENST00000613856 PIWIL4Q7Z3Z4 852 aaKnown RBP11.18□□□□□ -0.62
SLIRP-212ENST00000613856 IQCHQ86VS3 1027 aa11.18□□□□□ -0.62
SLIRP-212ENST00000613856 AMZ2Q86W34 360 aa11.18□□□□□ -0.62
SLIRP-212ENST00000613856 DCP2Q8IU60 420 aaKnown RBP11.18□□□□□ -0.62
SLIRP-212ENST00000613856 GALNT13Q8IUC8 556 aa11.18□□□□□ -0.62
SLIRP-212ENST00000613856 SPNS2Q8IVW8 549 aa11.18□□□□□ -0.62
SLIRP-212ENST00000613856 TRIM42Q8IWZ5 723 aa11.18□□□□□ -0.62
SLIRP-212ENST00000613856 SLC22A15Q8IZD6 547 aa11.18□□□□□ -0.62
SLIRP-212ENST00000613856 OR56A4Q8NGH8 313 aa11.18□□□□□ -0.62
SLIRP-212ENST00000613856 TMEM159Q96B96 161 aa11.18□□□□□ -0.62
SLIRP-212ENST00000613856 CCDC126Q96EE4 140 aa11.18□□□□□ -0.62
SLIRP-212ENST00000613856 MAGEB18Q96M61 343 aa11.18□□□□□ -0.62
SLIRP-212ENST00000613856 PAIP2Q9BPZ3 127 aaKnown RBP11.18□□□□□ -0.62
SLIRP-212ENST00000613856 DPEP2Q9H4A9 486 aa11.18□□□□□ -0.62
SLIRP-212ENST00000613856 FGF22Q9HCT0 170 aa11.18□□□□□ -0.62
SLIRP-212ENST00000613856 IKZF3Q9UKT9 509 aa11.18□□□□□ -0.62
SLIRP-212ENST00000613856 TMCO1Q9UM00 188 aa11.18□□□□□ -0.62
SLIRP-212ENST00000613856 APOBEC2Q9Y235 224 aaKnown RBP11.18□□□□□ -0.62
SLIRP-212ENST00000613856 CA5BQ9Y2D0 317 aa11.18□□□□□ -0.62
SLIRP-212ENST00000613856 PCYT1BQ9Y5K3 369 aaPredicted RBP11.18□□□□□ -0.62
SLIRP-212ENST00000613856 ATMQ13315 3056 aa11.18□□□□□ -0.62
SLIRP-212ENST00000613856 PTPRQQ9UMZ3 2332 aa11.17□□□□□ -0.62
SLIRP-212ENST00000613856 PRR19A6NJB7 356 aa11.17□□□□□ -0.62
SLIRP-212ENST00000613856 CDC7O00311 574 aa11.17□□□□□ -0.62
SLIRP-212ENST00000613856 SLC16A5O15375 505 aa11.17□□□□□ -0.62
SLIRP-212ENST00000613856 H2AFYO75367 372 aaKnown RBP11.17□□□□□ -0.62
SLIRP-212ENST00000613856 MATN4O95460 622 aa11.17□□□□□ -0.62
SLIRP-212ENST00000613856 C8GP07360 202 aa11.17□□□□□ -0.62
SLIRP-212ENST00000613856 ENO2P09104 434 aaPredicted RBP11.17□□□□□ -0.62
SLIRP-212ENST00000613856 VCLP18206 1134 aa11.17□□□□□ -0.62
SLIRP-212ENST00000613856 ALDH3A1P30838 453 aa11.17□□□□□ -0.62
SLIRP-212ENST00000613856 LSP1P33241 339 aa11.17□□□□□ -0.62
SLIRP-212ENST00000613856 THOP1P52888 689 aa11.17□□□□□ -0.62
SLIRP-212ENST00000613856 GNGT1P63211 74 aa11.17□□□□□ -0.62
SLIRP-212ENST00000613856 RACK1P63244 317 aaKnown RBP11.17□□□□□ -0.62
SLIRP-212ENST00000613856 PPARDQ03181 441 aa11.17□□□□□ -0.62
SLIRP-212ENST00000613856 ASPHQ12797 758 aa11.17□□□□□ -0.62
SLIRP-212ENST00000613856 OVGP1Q12889 678 aa11.17□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms