RNA–Protein interactions for RNA: ENST00000613744.4

POLR2J3-220, Transcript of RNA polymerase II subunit J3, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene POLR2J3, Length 2,096 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2J3-220ENST00000613744 GLMNQ92990 594 aa21.54■■□□□ 1.04
POLR2J3-220ENST00000613744 ZNF300Q96RE9 604 aaPredicted RBP21.54■■□□□ 1.04
POLR2J3-220ENST00000613744 SNX18Q96RF0 628 aa21.54■■□□□ 1.04
POLR2J3-220ENST00000613744 APOL2Q9BQE5 337 aa21.54■■□□□ 1.04
POLR2J3-220ENST00000613744 OSBPL10Q9BXB5 764 aa21.54■■□□□ 1.04
POLR2J3-220ENST00000613744 PRKD2Q9BZL6 878 aa21.54■■□□□ 1.04
POLR2J3-220ENST00000613744 IL37Q9NZH6 218 aa21.54■■□□□ 1.04
POLR2J3-220ENST00000613744 FOSL2P15408 326 aa21.54■■□□□ 1.04
POLR2J3-220ENST00000613744 ERCC2P18074 760 aa21.54■■□□□ 1.04
POLR2J3-220ENST00000613744 HRH2P25021 359 aa21.54■■□□□ 1.04
POLR2J3-220ENST00000613744 ZNF135P52742 658 aaPredicted RBP21.54■■□□□ 1.04
POLR2J3-220ENST00000613744 EMX2Q04743 252 aa21.54■■□□□ 1.04
POLR2J3-220ENST00000613744 CD47Q08722 323 aa21.54■■□□□ 1.04
POLR2J3-220ENST00000613744 RCAN2Q14206 197 aa21.54■■□□□ 1.04
POLR2J3-220ENST00000613744 SYCE2Q6PIF2 218 aa21.54■■□□□ 1.04
POLR2J3-220ENST00000613744 KIAA1958Q8N8K9 716 aa21.54■■□□□ 1.04
POLR2J3-220ENST00000613744 NETO2Q8NC67 525 aa21.54■■□□□ 1.04
POLR2J3-220ENST00000613744 NDNFQ8TB73 568 aa21.54■■□□□ 1.04
POLR2J3-220ENST00000613744 RASSF5Q8WWW0 418 aa21.54■■□□□ 1.04
POLR2J3-220ENST00000613744 SMG7Q92540 1137 aaKnown RBP21.54■■□□□ 1.04
POLR2J3-220ENST00000613744 SGCDQ92629 289 aa21.54■■□□□ 1.04
POLR2J3-220ENST00000613744 NTAN1Q96AB6 310 aa21.54■■□□□ 1.04
POLR2J3-220ENST00000613744 MBOAT4Q96T53 435 aa21.54■■□□□ 1.04
POLR2J3-220ENST00000613744 SEPHS2Q99611 448 aa21.54■■□□□ 1.04
POLR2J3-220ENST00000613744 IL12RB2Q99665 862 aa21.54■■□□□ 1.04
POLR2J3-220ENST00000613744 EPS8L2Q9H6S3 715 aa21.54■■□□□ 1.04
POLR2J3-220ENST00000613744 CLEC1BQ9P126 229 aa21.54■■□□□ 1.04
POLR2J3-220ENST00000613744 FBXO5Q9UKT4 447 aa21.54■■□□□ 1.04
POLR2J3-220ENST00000613744 M0QYT0 321 aa21.53■■□□□ 1.04
POLR2J3-220ENST00000613744 C1RP00736 705 aa21.53■■□□□ 1.04
POLR2J3-220ENST00000613744 NCK1P16333 377 aa21.53■■□□□ 1.04
POLR2J3-220ENST00000613744 ARNTP27540 789 aa21.53■■□□□ 1.04
POLR2J3-220ENST00000613744 HERVK_113P63132 956 aa21.53■■□□□ 1.04
POLR2J3-220ENST00000613744 CHRNEQ04844 493 aa21.53■■□□□ 1.04
POLR2J3-220ENST00000613744 MEP1AQ16819 746 aa21.53■■□□□ 1.04
POLR2J3-220ENST00000613744 PYCR3Q53H96 274 aa21.53■■□□□ 1.04
POLR2J3-220ENST00000613744 UNC50Q53HI1 259 aa21.53■■□□□ 1.04
POLR2J3-220ENST00000613744 ANKRD54Q6NXT1 300 aa21.53■■□□□ 1.04
POLR2J3-220ENST00000613744 USP43Q70EL4 1123 aa21.53■■□□□ 1.04
POLR2J3-220ENST00000613744 GALNT7Q86SF2 657 aa21.53■■□□□ 1.04
POLR2J3-220ENST00000613744 TSGA13Q96PP4 275 aa21.53■■□□□ 1.04
POLR2J3-220ENST00000613744 PPP1R2P1Q96PQ5 205 aa21.53■■□□□ 1.04
POLR2J3-220ENST00000613744 NPY6RQ99463 290 aa21.53■■□□□ 1.04
POLR2J3-220ENST00000613744 RBM4BQ9BQ04 359 aaKnown RBP21.53■■□□□ 1.04
POLR2J3-220ENST00000613744 RBM4Q9BWF3 364 aaKnown RBP21.53■■□□□ 1.04
POLR2J3-220ENST00000613744 TTLL2Q9BWV7 592 aa21.53■■□□□ 1.04
POLR2J3-220ENST00000613744 ERVK-6Q9BXR3 956 aa21.53■■□□□ 1.04
POLR2J3-220ENST00000613744 NOL6Q9H6R4 1146 aaKnown RBP21.53■■□□□ 1.04
POLR2J3-220ENST00000613744 SFXN1Q9H9B4 322 aa21.53■■□□□ 1.04
POLR2J3-220ENST00000613744 SPO11Q9Y5K1 396 aa21.53■■□□□ 1.04
POLR2J3-220ENST00000613744 DNAJC15Q9Y5T4 150 aa21.53■■□□□ 1.04
POLR2J3-220ENST00000613744 A3GALT2U3KPV4 340 aa21.53■■□□□ 1.04
POLR2J3-220ENST00000613744 UNC80Q8N2C7 3258 aa21.53■■□□□ 1.04
POLR2J3-220ENST00000613744 EVPLLA8MZ36 301 aa21.52■■□□□ 1.04
POLR2J3-220ENST00000613744 HNRNPA1P09651 372 aaKnown RBP eCLIP21.52■■□□□ 1.04
POLR2J3-220ENST00000613744 GABRR2P28476 465 aa21.52■■□□□ 1.04
POLR2J3-220ENST00000613744 CCR2P41597 374 aa21.52■■□□□ 1.04
POLR2J3-220ENST00000613744 CTU2Q2VPK5 515 aaKnown RBP21.52■■□□□ 1.04
POLR2J3-220ENST00000613744 SYT6Q5T7P8 510 aaPredicted RBP21.52■■□□□ 1.04
POLR2J3-220ENST00000613744 OTUD1Q5VV17 481 aaPredicted RBP21.52■■□□□ 1.04
POLR2J3-220ENST00000613744 KANK2Q63ZY3 851 aa21.52■■□□□ 1.04
POLR2J3-220ENST00000613744 GAREM2Q75VX8 874 aa21.52■■□□□ 1.04
POLR2J3-220ENST00000613744 TAS2R42Q7RTR8 314 aa21.52■■□□□ 1.04
POLR2J3-220ENST00000613744 TMEM150AQ86TG1 271 aa21.52■■□□□ 1.04
POLR2J3-220ENST00000613744 IFNEQ86WN2 208 aa21.52■■□□□ 1.04
POLR2J3-220ENST00000613744 TMC8Q8IU68 726 aa21.52■■□□□ 1.04
POLR2J3-220ENST00000613744 TP53INP1Q96A56 240 aa21.52■■□□□ 1.04
POLR2J3-220ENST00000613744 TCEAL4Q96EI5 215 aa21.52■■□□□ 1.04
POLR2J3-220ENST00000613744 LRRC3Q9BY71 257 aa21.52■■□□□ 1.04
POLR2J3-220ENST00000613744 CEP44Q9C0F1 390 aa21.52■■□□□ 1.04
POLR2J3-220ENST00000613744 SLIRPQ9GZT3 109 aaKnown RBP21.52■■□□□ 1.04
POLR2J3-220ENST00000613744 ASAH2Q9NR71 780 aa21.52■■□□□ 1.04
POLR2J3-220ENST00000613744 TIMM22Q9Y584 194 aa21.52■■□□□ 1.04
POLR2J3-220ENST00000613744 GPR45Q9Y5Y3 372 aa21.52■■□□□ 1.04
POLR2J3-220ENST00000613744 A0A1W2PRU2 124 aa21.52■■□□□ 1.04
POLR2J3-220ENST00000613744 G3V2T6 193 aa21.52■■□□□ 1.04
POLR2J3-220ENST00000613744 IDH3BO43837 385 aa21.52■■□□□ 1.04
POLR2J3-220ENST00000613744 RHOP08100 348 aa21.52■■□□□ 1.04
POLR2J3-220ENST00000613744 HOXA9P31269 272 aa21.52■■□□□ 1.04
POLR2J3-220ENST00000613744 ISL1P61371 349 aa21.52■■□□□ 1.04
POLR2J3-220ENST00000613744 CYP4F8P98187 520 aa21.52■■□□□ 1.04
POLR2J3-220ENST00000613744 MVKQ03426 396 aa21.52■■□□□ 1.04
POLR2J3-220ENST00000613744 EMX1Q04741 257 aaPredicted RBP21.52■■□□□ 1.04
POLR2J3-220ENST00000613744 CHRNB3Q05901 458 aa21.52■■□□□ 1.04
POLR2J3-220ENST00000613744 VAC14Q08AM6 782 aa21.52■■□□□ 1.04
POLR2J3-220ENST00000613744 SCAPQ12770 1279 aa21.52■■□□□ 1.04
POLR2J3-220ENST00000613744 FADDQ13158 208 aa21.52■■□□□ 1.04
POLR2J3-220ENST00000613744 SEMA3BQ13214 749 aa21.52■■□□□ 1.04
POLR2J3-220ENST00000613744 RFX4Q33E94 735 aa21.52■■□□□ 1.04
POLR2J3-220ENST00000613744 RABL3Q5HYI8 236 aa21.52■■□□□ 1.04
POLR2J3-220ENST00000613744 GPR153Q6NV75 609 aa21.52■■□□□ 1.04
POLR2J3-220ENST00000613744 MON1AQ86VX9 555 aa21.52■■□□□ 1.04
POLR2J3-220ENST00000613744 TP53INP2Q8IXH6 220 aa21.52■■□□□ 1.04
POLR2J3-220ENST00000613744 DNAJB14Q8TBM8 379 aa21.52■■□□□ 1.04
POLR2J3-220ENST00000613744 TWIST2Q8WVJ9 160 aa21.52■■□□□ 1.04
POLR2J3-220ENST00000613744 TBL1YQ9BQ87 522 aa21.52■■□□□ 1.04
POLR2J3-220ENST00000613744 MMP27Q9H306 513 aa21.52■■□□□ 1.04
POLR2J3-220ENST00000613744 TRIT1Q9H3H1 467 aaKnown RBP21.52■■□□□ 1.04
POLR2J3-220ENST00000613744 IL21Q9HBE4 155 aa21.52■■□□□ 1.04
POLR2J3-220ENST00000613744 DNAJB9Q9UBS3 223 aa21.52■■□□□ 1.04
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms