RNA–Protein interactions for RNA: ENST00000613547.4

MDC1-209, Transcript of mediator of DNA damage checkpoint 1, humanhuman

TSL 5 BASIC

Gene MDC1, Length 830 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MDC1-209ENST00000613547 ABHD2P08910 425 aa12.91□□□□□ -0.34
MDC1-209ENST00000613547 FAM153BP0C7A2 387 aa12.91□□□□□ -0.34
MDC1-209ENST00000613547 MPC1LP0DKB6 136 aa12.91□□□□□ -0.34
MDC1-209ENST00000613547 FDXRP22570 491 aa12.91□□□□□ -0.34
MDC1-209ENST00000613547 SHMT2P34897 504 aa12.91□□□□□ -0.34
MDC1-209ENST00000613547 IL2P60568 153 aa12.91□□□□□ -0.34
MDC1-209ENST00000613547 POU4F1Q01851 419 aa12.91□□□□□ -0.34
MDC1-209ENST00000613547 PRKAA1Q13131 559 aa12.91□□□□□ -0.34
MDC1-209ENST00000613547 PRKG2Q13237 762 aa12.91□□□□□ -0.34
MDC1-209ENST00000613547 UAP1Q16222 522 aaPredicted RBP12.91□□□□□ -0.34
MDC1-209ENST00000613547 FAM153CQ494X1 144 aa12.91□□□□□ -0.34
MDC1-209ENST00000613547 ACSBG2Q5FVE4 666 aa12.91□□□□□ -0.34
MDC1-209ENST00000613547 NKAIN2Q5VXU1 208 aa12.91□□□□□ -0.34
MDC1-209ENST00000613547 WDR93Q6P2C0 686 aa12.91□□□□□ -0.34
MDC1-209ENST00000613547 WDR74Q6RFH5 385 aaPredicted RBP12.91□□□□□ -0.34
MDC1-209ENST00000613547 USP53Q70EK8 1073 aa12.91□□□□□ -0.34
MDC1-209ENST00000613547 TAOK1Q7L7X3 1001 aa12.91□□□□□ -0.34
MDC1-209ENST00000613547 TMPRSS7Q7RTY8 843 aa12.91□□□□□ -0.34
MDC1-209ENST00000613547 OOSP2Q86WS3 158 aa12.91□□□□□ -0.34
MDC1-209ENST00000613547 CPNE9Q8IYJ1 553 aa12.91□□□□□ -0.34
MDC1-209ENST00000613547 MYO1HQ8N1T3 1032 aa12.91□□□□□ -0.34
MDC1-209ENST00000613547 DCBLD1Q8N8Z6 715 aa12.91□□□□□ -0.34
MDC1-209ENST00000613547 OR52E1Q8NGJ3 308 aa12.91□□□□□ -0.34
MDC1-209ENST00000613547 GIMAP7Q8NHV1 300 aa12.91□□□□□ -0.34
MDC1-209ENST00000613547 NCSTNQ92542 709 aa12.91□□□□□ -0.34
MDC1-209ENST00000613547 RAD51AP1Q96B01 352 aa12.91□□□□□ -0.34
MDC1-209ENST00000613547 MRRFQ96E11 262 aaKnown RBP12.91□□□□□ -0.34
MDC1-209ENST00000613547 SLC30A3Q99726 388 aa12.91□□□□□ -0.34
MDC1-209ENST00000613547 STRADBQ9C0K7 418 aa12.91□□□□□ -0.34
MDC1-209ENST00000613547 SRMSQ9H3Y6 488 aa12.91□□□□□ -0.34
MDC1-209ENST00000613547 TFB2MQ9H5Q4 396 aaKnown RBP12.91□□□□□ -0.34
MDC1-209ENST00000613547 RDH14Q9HBH5 336 aa12.91□□□□□ -0.34
MDC1-209ENST00000613547 POPDC3Q9HBV1 291 aa12.91□□□□□ -0.34
MDC1-209ENST00000613547 SYTL2Q9HCH5 934 aa12.91□□□□□ -0.34
MDC1-209ENST00000613547 AKAP7Q9P0M2 348 aaPredicted RBP12.91□□□□□ -0.34
MDC1-209ENST00000613547 NOL12Q9UGY1 213 aaKnown RBP eCLIP12.91□□□□□ -0.34
MDC1-209ENST00000613547 TSR3Q9UJK0 312 aaKnown RBP12.91□□□□□ -0.34
MDC1-209ENST00000613547 V9GYY5 206 aaPredicted RBP12.91□□□□□ -0.34
MDC1-209ENST00000613547 PCNX2A6NKB5 2137 aa12.91□□□□□ -0.34
MDC1-209ENST00000613547 SPTBN2O15020 2390 aa12.9□□□□□ -0.34
MDC1-209ENST00000613547 PABPN1LA6NDY0 278 aaKnown RBP12.9□□□□□ -0.34
MDC1-209ENST00000613547 RIPK2O43353 540 aa12.9□□□□□ -0.34
MDC1-209ENST00000613547 CSO75390 466 aaKnown RBP12.9□□□□□ -0.34
MDC1-209ENST00000613547 MATN4O95460 622 aa12.9□□□□□ -0.34
MDC1-209ENST00000613547 MYBL2P10244 700 aa12.9□□□□□ -0.34
MDC1-209ENST00000613547 STMN1P16949 149 aa12.9□□□□□ -0.34
MDC1-209ENST00000613547 TYRP1P17643 537 aa12.9□□□□□ -0.34
MDC1-209ENST00000613547 MAP4P27816 1152 aaKnown RBP12.9□□□□□ -0.34
MDC1-209ENST00000613547 MSH2P43246 934 aa12.9□□□□□ -0.34
MDC1-209ENST00000613547 CAPZBP47756 277 aa12.9□□□□□ -0.34
MDC1-209ENST00000613547 INHBCP55103 352 aa12.9□□□□□ -0.34
MDC1-209ENST00000613547 VSNL1P62760 191 aa12.9□□□□□ -0.34
MDC1-209ENST00000613547 USP10Q14694 798 aaKnown RBP12.9□□□□□ -0.34
MDC1-209ENST00000613547 ISXQ2M1V0 245 aa12.9□□□□□ -0.34
MDC1-209ENST00000613547 ERCC6LQ2NKX8 1250 aa12.9□□□□□ -0.34
MDC1-209ENST00000613547 CDCP2Q5VXM1 449 aa12.9□□□□□ -0.34
MDC1-209ENST00000613547 TMEM71Q6P5X7 295 aa12.9□□□□□ -0.34
MDC1-209ENST00000613547 PAQR3Q6TCH7 311 aa12.9□□□□□ -0.34
MDC1-209ENST00000613547 CNPY4Q8N129 248 aa12.9□□□□□ -0.34
MDC1-209ENST00000613547 NKAPQ8N5F7 415 aaKnown RBP12.9□□□□□ -0.34
MDC1-209ENST00000613547 OR4E2Q8NGC2 313 aa12.9□□□□□ -0.34
MDC1-209ENST00000613547 OR4D9Q8NGE8 314 aa12.9□□□□□ -0.34
MDC1-209ENST00000613547 JPH3Q8WXH2 748 aaPredicted RBP12.9□□□□□ -0.34
MDC1-209ENST00000613547 LINGO1Q96FE5 620 aa12.9□□□□□ -0.34
MDC1-209ENST00000613547 ZDHHC12Q96GR4 267 aa12.9□□□□□ -0.34
MDC1-209ENST00000613547 GPR22Q99680 433 aa12.9□□□□□ -0.34
MDC1-209ENST00000613547 OLFM1Q99784 485 aa12.9□□□□□ -0.34
MDC1-209ENST00000613547 CCDC77Q9BR77 488 aa12.9□□□□□ -0.34
MDC1-209ENST00000613547 MCMBPQ9BTE3 642 aa12.9□□□□□ -0.34
MDC1-209ENST00000613547 RAB11FIP5Q9BXF6 653 aa12.9□□□□□ -0.34
MDC1-209ENST00000613547 SLC39A10Q9ULF5 831 aa12.9□□□□□ -0.34
MDC1-209ENST00000613547 ATXN7L1Q9ULK2 861 aaPredicted RBP12.9□□□□□ -0.34
MDC1-209ENST00000613547 MTO1Q9Y2Z2 717 aaKnown RBP12.9□□□□□ -0.34
MDC1-209ENST00000613547 EXOC1LA0A1B0GW35 172 aa12.89□□□□□ -0.35
MDC1-209ENST00000613547 OR6C74A6NCV1 312 aa12.89□□□□□ -0.35
MDC1-209ENST00000613547 OR5K3A6NET4 321 aa12.89□□□□□ -0.35
MDC1-209ENST00000613547 ZBTB14O43829 449 aa12.89□□□□□ -0.35
MDC1-209ENST00000613547 KRT38O76015 456 aa12.89□□□□□ -0.35
MDC1-209ENST00000613547 C1orf105O95561 183 aa12.89□□□□□ -0.35
MDC1-209ENST00000613547 ITGA2BP08514 1039 aa12.89□□□□□ -0.35
MDC1-209ENST00000613547 SERPINB9P50453 376 aa12.89□□□□□ -0.35
MDC1-209ENST00000613547 CLDN6P56747 220 aa12.89□□□□□ -0.35
MDC1-209ENST00000613547 TAS2R39P59534 338 aa12.89□□□□□ -0.35
MDC1-209ENST00000613547 TARDBPQ13148 414 aaKnown RBP eCLIP12.89□□□□□ -0.35
MDC1-209ENST00000613547 TRA2AQ13595 282 aaKnown RBP eCLIP12.89□□□□□ -0.35
MDC1-209ENST00000613547 SLC29A2Q14542 456 aa12.89□□□□□ -0.35
MDC1-209ENST00000613547 EFTUD2Q15029 972 aaKnown RBP eCLIP12.89□□□□□ -0.35
MDC1-209ENST00000613547 PHF19Q5T6S3 580 aa12.89□□□□□ -0.35
MDC1-209ENST00000613547 LGSNQ5TDP6 509 aa12.89□□□□□ -0.35
MDC1-209ENST00000613547 EMBQ6PCB8 327 aa12.89□□□□□ -0.35
MDC1-209ENST00000613547 PIWIL4Q7Z3Z4 852 aaKnown RBP12.89□□□□□ -0.35
MDC1-209ENST00000613547 AMIGO1Q86WK6 493 aa12.89□□□□□ -0.35
MDC1-209ENST00000613547 UHMK1Q8TAS1 419 aaKnown RBP12.89□□□□□ -0.35
MDC1-209ENST00000613547 EEF1AKMT1Q8WVE0 214 aa12.89□□□□□ -0.35
MDC1-209ENST00000613547 UBLCP1Q8WVY7 318 aaPredicted RBP12.89□□□□□ -0.35
MDC1-209ENST00000613547 RSC1A1Q92681 617 aa12.89□□□□□ -0.35
MDC1-209ENST00000613547 NUDT22Q9BRQ3 303 aa12.89□□□□□ -0.35
MDC1-209ENST00000613547 RAB33BQ9H082 229 aa12.89□□□□□ -0.35
MDC1-209ENST00000613547 GPAMQ9HCL2 828 aa12.89□□□□□ -0.35
MDC1-209ENST00000613547 HRASLS2Q9NWW9 162 aa12.89□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms