RNA–Protein interactions for RNA: ENST00000613394.4

HPS1-215, Transcript of HPS1, biogenesis of lysosomal organelles complex 3 subunit 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene HPS1, Length 3,714 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS1-215ENST00000613394 NUDT4Q9NZJ9 180 aa13.55□□□□□ -0.24
HPS1-215ENST00000613394 ABT1Q9ULW3 272 aaKnown RBP13.55□□□□□ -0.24
HPS1-215ENST00000613394 TPRKBQ9Y3C4 175 aa13.55□□□□□ -0.24
HPS1-215ENST00000613394 ARIH1Q9Y4X5 557 aaPredicted RBP13.55□□□□□ -0.24
HPS1-215ENST00000613394 KNL1Q8NG31 2342 aa13.55□□□□□ -0.24
HPS1-215ENST00000613394 MTX2O75431 263 aa13.54□□□□□ -0.24
HPS1-215ENST00000613394 WDR47O94967 919 aa13.54□□□□□ -0.24
HPS1-215ENST00000613394 ESR1P03372 595 aa13.54□□□□□ -0.24
HPS1-215ENST00000613394 FUT4P22083 530 aa13.54□□□□□ -0.24
HPS1-215ENST00000613394 SLC6A4P31645 630 aa13.54□□□□□ -0.24
HPS1-215ENST00000613394 OPRL1P41146 370 aa13.54□□□□□ -0.24
HPS1-215ENST00000613394 TRPC1P48995 793 aa13.54□□□□□ -0.24
HPS1-215ENST00000613394 PDCD4Q53EL6 469 aaKnown RBP13.54□□□□□ -0.24
HPS1-215ENST00000613394 SERINC5Q86VE9 423 aa13.54□□□□□ -0.24
HPS1-215ENST00000613394 STK40Q8N2I9 435 aa13.54□□□□□ -0.24
HPS1-215ENST00000613394 ACDQ96AP0 544 aa13.54□□□□□ -0.24
HPS1-215ENST00000613394 CEP19Q96LK0 163 aa13.54□□□□□ -0.24
HPS1-215ENST00000613394 PRDM8Q9NQV8 689 aa13.54□□□□□ -0.24
HPS1-215ENST00000613394 GMEB1Q9Y692 573 aa13.54□□□□□ -0.24
HPS1-215ENST00000613394 RGPD3A6NKT7 1758 aaPredicted RBP13.54□□□□□ -0.24
HPS1-215ENST00000613394 RGPD4Q7Z3J3 1758 aa13.54□□□□□ -0.24
HPS1-215ENST00000613394 LCTP09848 1927 aa13.54□□□□□ -0.24
HPS1-215ENST00000613394 H0Y858 1186 aa13.54□□□□□ -0.24
HPS1-215ENST00000613394 M0QZQ0 153 aa13.54□□□□□ -0.24
HPS1-215ENST00000613394 ACOX3O15254 700 aa13.54□□□□□ -0.24
HPS1-215ENST00000613394 CREG1O75629 220 aa13.54□□□□□ -0.24
HPS1-215ENST00000613394 STK16O75716 305 aa13.54□□□□□ -0.24
HPS1-215ENST00000613394 PBLDP30039 288 aaPredicted RBP13.54□□□□□ -0.24
HPS1-215ENST00000613394 PTGER3P43115 390 aa13.54□□□□□ -0.24
HPS1-215ENST00000613394 NFKB2Q00653 900 aa13.54□□□□□ -0.24
HPS1-215ENST00000613394 PHKG1Q16816 387 aa13.54□□□□□ -0.24
HPS1-215ENST00000613394 DGUOKQ16854 277 aa13.54□□□□□ -0.24
HPS1-215ENST00000613394 NECAB2Q7Z6G3 386 aa13.54□□□□□ -0.24
HPS1-215ENST00000613394 STON2Q8WXE9 905 aa13.54□□□□□ -0.24
HPS1-215ENST00000613394 SLC39A13Q96H72 371 aa13.54□□□□□ -0.24
HPS1-215ENST00000613394 PSKH2Q96QS6 385 aa13.54□□□□□ -0.24
HPS1-215ENST00000613394 ERVK-18Q9QC07 812 aa13.54□□□□□ -0.24
HPS1-215ENST00000613394 CD84Q9UIB8 345 aa13.54□□□□□ -0.24
HPS1-215ENST00000613394 GNG14A0A1W2PPG7 69 aa13.54□□□□□ -0.24
HPS1-215ENST00000613394 KRT87PA6NCN2 255 aa13.54□□□□□ -0.24
HPS1-215ENST00000613394 PER2O15055 1255 aa13.54□□□□□ -0.24
HPS1-215ENST00000613394 CLDN11O75508 207 aa13.54□□□□□ -0.24
HPS1-215ENST00000613394 CLDN7O95471 211 aa13.54□□□□□ -0.24
HPS1-215ENST00000613394 B3GALT4O96024 378 aa13.54□□□□□ -0.24
HPS1-215ENST00000613394 ANXA5P08758 320 aa13.54□□□□□ -0.24
HPS1-215ENST00000613394 COX7A2P14406 83 aa13.54□□□□□ -0.24
HPS1-215ENST00000613394 XPAP23025 273 aaPredicted RBP13.54□□□□□ -0.24
HPS1-215ENST00000613394 MZF1P28698 734 aaPredicted RBP13.54□□□□□ -0.24
HPS1-215ENST00000613394 PIGAP37287 484 aa13.54□□□□□ -0.24
HPS1-215ENST00000613394 MAD2L1Q13257 205 aaPredicted RBP13.54□□□□□ -0.24
HPS1-215ENST00000613394 MADCAM1Q13477 382 aa13.54□□□□□ -0.24
HPS1-215ENST00000613394 NPTX1Q15818 432 aa13.54□□□□□ -0.24
HPS1-215ENST00000613394 NADSYN1Q6IA69 706 aa13.54□□□□□ -0.24
HPS1-215ENST00000613394 OR4F3Q6IEY1 312 aa13.54□□□□□ -0.24
HPS1-215ENST00000613394 GPR153Q6NV75 609 aa13.54□□□□□ -0.24
HPS1-215ENST00000613394 SPRED1Q7Z699 444 aa13.54□□□□□ -0.24
HPS1-215ENST00000613394 RGL4Q8IZJ4 473 aa13.54□□□□□ -0.24
HPS1-215ENST00000613394 ZNF420Q8TAQ5 688 aaPredicted RBP13.54□□□□□ -0.24
HPS1-215ENST00000613394 ZHX1-C8orf76Q96EF9 292 aa13.54□□□□□ -0.24
HPS1-215ENST00000613394 UHRF1Q96T88 793 aaPredicted RBP13.54□□□□□ -0.24
HPS1-215ENST00000613394 TDRD1Q9BXT4 1180 aaKnown RBP13.54□□□□□ -0.24
HPS1-215ENST00000613394 RRAGCQ9HB90 399 aa13.54□□□□□ -0.24
HPS1-215ENST00000613394 NEU3Q9UQ49 428 aa13.54□□□□□ -0.24
HPS1-215ENST00000613394 ZNF451Q9Y4E5 1061 aa13.54□□□□□ -0.24
HPS1-215ENST00000613394 ASPDHA6ND91 283 aa13.53□□□□□ -0.24
HPS1-215ENST00000613394 STX16O14662 325 aa13.53□□□□□ -0.24
HPS1-215ENST00000613394 EPOP01588 193 aa13.53□□□□□ -0.24
HPS1-215ENST00000613394 CYP11A1P05108 521 aa13.53□□□□□ -0.24
HPS1-215ENST00000613394 ZNF12P17014 697 aa13.53□□□□□ -0.24
HPS1-215ENST00000613394 HOXC13P31276 330 aa13.53□□□□□ -0.24
HPS1-215ENST00000613394 PSMD8P48556 350 aa13.53□□□□□ -0.24
HPS1-215ENST00000613394 PRR23BQ6ZRT6 265 aa13.53□□□□□ -0.24
HPS1-215ENST00000613394 ANKS3Q6ZW76 656 aa13.53□□□□□ -0.24
HPS1-215ENST00000613394 C11orf74Q86VG3 221 aa13.53□□□□□ -0.24
HPS1-215ENST00000613394 HEATR4Q86WZ0 1026 aa13.53□□□□□ -0.24
HPS1-215ENST00000613394 ZNF382Q96SR6 550 aa13.53□□□□□ -0.24
HPS1-215ENST00000613394 KRT84Q9NSB2 600 aa13.53□□□□□ -0.24
HPS1-215ENST00000613394 ATAD3AQ9NVI7 634 aa13.53□□□□□ -0.24
HPS1-215ENST00000613394 MTRRQ9UBK8 725 aa13.53□□□□□ -0.24
HPS1-215ENST00000613394 ZNF225Q9UK10 706 aa13.53□□□□□ -0.24
HPS1-215ENST00000613394 CORINQ9Y5Q5 1042 aa13.53□□□□□ -0.24
HPS1-215ENST00000613394 FUOMA2VDF0 154 aa13.53□□□□□ -0.24
HPS1-215ENST00000613394 ALOX12P18054 663 aa13.53□□□□□ -0.24
HPS1-215ENST00000613394 RPIAP49247 311 aa13.53□□□□□ -0.24
HPS1-215ENST00000613394 ALDH7A1P49419 539 aaKnown RBP13.53□□□□□ -0.24
HPS1-215ENST00000613394 VEPH1Q14D04 833 aa13.53□□□□□ -0.24
HPS1-215ENST00000613394 SPCS2Q15005 226 aa13.53□□□□□ -0.24
HPS1-215ENST00000613394 SKIV2LQ15477 1246 aaKnown RBP13.53□□□□□ -0.24
HPS1-215ENST00000613394 FUBP3Q96I24 572 aaKnown RBP eCLIP13.53□□□□□ -0.24
HPS1-215ENST00000613394 MTERF1Q99551 399 aaKnown RBP13.53□□□□□ -0.24
HPS1-215ENST00000613394 ARHGAP39Q9C0H5 1083 aa13.53□□□□□ -0.24
HPS1-215ENST00000613394 REEP1Q9H902 201 aa13.53□□□□□ -0.24
HPS1-215ENST00000613394 ITM2CQ9NQX7 267 aa13.53□□□□□ -0.24
HPS1-215ENST00000613394 SNX8Q9Y5X2 465 aa13.53□□□□□ -0.24
HPS1-215ENST00000613394 MTMR11A4FU01 709 aa13.53□□□□□ -0.24
HPS1-215ENST00000613394 TRIM43BA6NCK2 446 aa13.53□□□□□ -0.24
HPS1-215ENST00000613394 DLGAP1O14490 977 aa13.53□□□□□ -0.24
HPS1-215ENST00000613394 RGS5O15539 181 aa13.53□□□□□ -0.24
HPS1-215ENST00000613394 BCAS1O75363 584 aaPredicted RBP13.53□□□□□ -0.24
HPS1-215ENST00000613394 FSHRP23945 695 aa13.53□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 47.9 ms