RNA–Protein interactions for RNA: ENST00000613073.4

CNOT3-208, Transcript of CCR4-NOT transcription complex subunit 3, humanhuman

TSL 2

Gene CNOT3, Length 2,778 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT3-208ENST00000613073 HMGCLP35914 325 aa16.18■□□□□ 0.18
CNOT3-208ENST00000613073 AP1S1P61966 158 aa16.18■□□□□ 0.18
CNOT3-208ENST00000613073 YBX1P67809 324 aaKnown RBP16.18■□□□□ 0.18
CNOT3-208ENST00000613073 SLC7A9P82251 487 aa16.18■□□□□ 0.18
CNOT3-208ENST00000613073 OCA2Q04671 838 aa16.18■□□□□ 0.18
CNOT3-208ENST00000613073 GALNT1Q10472 559 aaPredicted RBP16.18■□□□□ 0.18
CNOT3-208ENST00000613073 STX5Q13190 355 aa16.18■□□□□ 0.18
CNOT3-208ENST00000613073 MPPE1Q53F39 396 aa16.18■□□□□ 0.18
CNOT3-208ENST00000613073 OTUD3Q5T2D3 398 aaPredicted RBP16.18■□□□□ 0.18
CNOT3-208ENST00000613073 PLPP4Q5VZY2 271 aa16.18■□□□□ 0.18
CNOT3-208ENST00000613073 ELMOD1Q8N336 334 aa16.18■□□□□ 0.18
CNOT3-208ENST00000613073 PARP8Q8N3A8 854 aa16.18■□□□□ 0.18
CNOT3-208ENST00000613073 CD200R1Q8TD46 325 aa16.18■□□□□ 0.18
CNOT3-208ENST00000613073 ZFP90Q8TF47 636 aa16.18■□□□□ 0.18
CNOT3-208ENST00000613073 ASAH2Q9NR71 780 aa16.18■□□□□ 0.18
CNOT3-208ENST00000613073 HACD3Q9P035 362 aa16.18■□□□□ 0.18
CNOT3-208ENST00000613073 B3GNT3Q9Y2A9 372 aa16.18■□□□□ 0.18
CNOT3-208ENST00000613073 PTPRSQ13332 1948 aa16.18■□□□□ 0.18
CNOT3-208ENST00000613073 CHD9Q3L8U1 2897 aa16.18■□□□□ 0.18
CNOT3-208ENST00000613073 EIF3FO00303 357 aaPredicted RBP16.18■□□□□ 0.18
CNOT3-208ENST00000613073 ADH1AP07327 375 aa16.18■□□□□ 0.18
CNOT3-208ENST00000613073 PSMA3P25788 255 aa16.18■□□□□ 0.18
CNOT3-208ENST00000613073 ALDH4A1P30038 563 aa16.18■□□□□ 0.18
CNOT3-208ENST00000613073 ECT2LQ008S8 904 aa16.18■□□□□ 0.18
CNOT3-208ENST00000613073 PLEKHG6Q3KR16 790 aa16.18■□□□□ 0.18
CNOT3-208ENST00000613073 DDIASQ8IXT1 998 aa16.18■□□□□ 0.18
CNOT3-208ENST00000613073 C19orf60Q96EN9 201 aa16.18■□□□□ 0.18
CNOT3-208ENST00000613073 ZNF347Q96SE7 839 aa16.18■□□□□ 0.18
CNOT3-208ENST00000613073 BOCQ9BWV1 1114 aa16.18■□□□□ 0.18
CNOT3-208ENST00000613073 EPS8L2Q9H6S3 715 aa16.18■□□□□ 0.18
CNOT3-208ENST00000613073 ZFYVE1Q9HBF4 777 aa16.18■□□□□ 0.18
CNOT3-208ENST00000613073 MAGEE1Q9HCI5 957 aa16.18■□□□□ 0.18
CNOT3-208ENST00000613073 KLHL3Q9UH77 587 aa16.18■□□□□ 0.18
CNOT3-208ENST00000613073 ZNF229Q9UJW7 825 aa16.18■□□□□ 0.18
CNOT3-208ENST00000613073 PCDHGA3Q9Y5H0 932 aa16.18■□□□□ 0.18
CNOT3-208ENST00000613073 ANKRD34BA5PLL1 514 aa16.17■□□□□ 0.18
CNOT3-208ENST00000613073 SLC22A2O15244 555 aa16.17■□□□□ 0.18
CNOT3-208ENST00000613073 EFCAB14O75071 495 aa16.17■□□□□ 0.18
CNOT3-208ENST00000613073 ZNF821O75541 412 aaPredicted RBP16.17■□□□□ 0.18
CNOT3-208ENST00000613073 PRAMEF1O95521 474 aa16.17■□□□□ 0.18
CNOT3-208ENST00000613073 TSPAN12O95859 305 aa16.17■□□□□ 0.18
CNOT3-208ENST00000613073 FASP25445 335 aa16.17■□□□□ 0.18
CNOT3-208ENST00000613073 HNF1BP35680 557 aa16.17■□□□□ 0.18
CNOT3-208ENST00000613073 NEK2P51955 445 aa16.17■□□□□ 0.18
CNOT3-208ENST00000613073 LSM3P62310 102 aaKnown RBP16.17■□□□□ 0.18
CNOT3-208ENST00000613073 CAPRIN1Q14444 709 aaKnown RBP16.17■□□□□ 0.18
CNOT3-208ENST00000613073 UGT3A2Q3SY77 523 aa16.17■□□□□ 0.18
CNOT3-208ENST00000613073 SAMD4BQ5PRF9 694 aaKnown RBP16.17■□□□□ 0.18
CNOT3-208ENST00000613073 ZSWIM9Q86XI8 627 aa16.17■□□□□ 0.18
CNOT3-208ENST00000613073 CLYBLQ8N0X4 340 aa16.17■□□□□ 0.18
CNOT3-208ENST00000613073 CD300AQ9UGN4 299 aa16.17■□□□□ 0.18
CNOT3-208ENST00000613073 BTRCQ9Y297 605 aa16.17■□□□□ 0.18
CNOT3-208ENST00000613073 VPS9D1Q9Y2B5 631 aa16.17■□□□□ 0.18
CNOT3-208ENST00000613073 GBF1Q92538 1859 aa16.17■□□□□ 0.18
CNOT3-208ENST00000613073 KIAA0355O15063 1070 aa16.17■□□□□ 0.18
CNOT3-208ENST00000613073 HSPA8P11142 646 aaKnown RBP16.17■□□□□ 0.18
CNOT3-208ENST00000613073 IL2P60568 153 aa16.17■□□□□ 0.18
CNOT3-208ENST00000613073 TRAP1Q12931 704 aaKnown RBP16.17■□□□□ 0.18
CNOT3-208ENST00000613073 CCDC149Q6ZUS6 474 aa16.17■□□□□ 0.18
CNOT3-208ENST00000613073 NKAPQ8N5F7 415 aaKnown RBP16.17■□□□□ 0.18
CNOT3-208ENST00000613073 CLDN19Q8N6F1 224 aa16.17■□□□□ 0.18
CNOT3-208ENST00000613073 DCBLD1Q8N8Z6 715 aa16.17■□□□□ 0.18
CNOT3-208ENST00000613073 MYLIPQ8WY64 445 aa16.17■□□□□ 0.18
CNOT3-208ENST00000613073 TMEM9Q9P0T7 183 aa16.17■□□□□ 0.18
CNOT3-208ENST00000613073 DENND4CQ5VZ89 1909 aa16.17■□□□□ 0.18
CNOT3-208ENST00000613073 TRIM64A6NGJ6 449 aa16.16■□□□□ 0.18
CNOT3-208ENST00000613073 H7C0S8 307 aa16.16■□□□□ 0.18
CNOT3-208ENST00000613073 PIP5K1BO14986 540 aa16.16■□□□□ 0.18
CNOT3-208ENST00000613073 MTHFD1P11586 935 aaKnown RBP16.16■□□□□ 0.18
CNOT3-208ENST00000613073 HLA-FP30511 346 aa16.16■□□□□ 0.18
CNOT3-208ENST00000613073 ADSLP30566 484 aaPredicted RBP16.16■□□□□ 0.18
CNOT3-208ENST00000613073 CAPGP40121 348 aa16.16■□□□□ 0.18
CNOT3-208ENST00000613073 ATP6V0D1P61421 351 aa16.16■□□□□ 0.18
CNOT3-208ENST00000613073 CREMQ03060 361 aa16.16■□□□□ 0.18
CNOT3-208ENST00000613073 CACNG1Q06432 222 aa16.16■□□□□ 0.18
CNOT3-208ENST00000613073 ILF2Q12905 390 aaKnown RBP16.16■□□□□ 0.18
CNOT3-208ENST00000613073 ZNF846Q147U1 533 aa16.16■□□□□ 0.18
CNOT3-208ENST00000613073 CYBRD1Q53TN4 286 aa16.16■□□□□ 0.18
CNOT3-208ENST00000613073 TMEM25Q86YD3 366 aa16.16■□□□□ 0.18
CNOT3-208ENST00000613073 FIBINQ8TAL6 211 aa16.16■□□□□ 0.18
CNOT3-208ENST00000613073 HTRA1Q92743 480 aa16.16■□□□□ 0.18
CNOT3-208ENST00000613073 SLC45A3Q96JT2 553 aa16.16■□□□□ 0.18
CNOT3-208ENST00000613073 ING2Q9H160 280 aa16.16■□□□□ 0.18
CNOT3-208ENST00000613073 ASB8Q9H765 288 aa16.16■□□□□ 0.18
CNOT3-208ENST00000613073 AKTIPQ9H8T0 292 aa16.16■□□□□ 0.18
CNOT3-208ENST00000613073 MRPL40Q9NQ50 206 aaKnown RBP16.16■□□□□ 0.18
CNOT3-208ENST00000613073 MAFFQ9ULX9 164 aa16.16■□□□□ 0.18
CNOT3-208ENST00000613073 TIMM22Q9Y584 194 aa16.16■□□□□ 0.18
CNOT3-208ENST00000613073 A0A0J9YYE9 177 aa16.16■□□□□ 0.18
CNOT3-208ENST00000613073 TRIM64BA6NI03 449 aa16.16■□□□□ 0.18
CNOT3-208ENST00000613073 AZIN1O14977 448 aa16.16■□□□□ 0.18
CNOT3-208ENST00000613073 CHEK2O96017 543 aa16.16■□□□□ 0.18
CNOT3-208ENST00000613073 TRBC1P01850 177 aa16.16■□□□□ 0.18
CNOT3-208ENST00000613073 PRDX3P30048 256 aaKnown RBP16.16■□□□□ 0.18
CNOT3-208ENST00000613073 PTGER3P43115 390 aa16.16■□□□□ 0.18
CNOT3-208ENST00000613073 HK3P52790 923 aa16.16■□□□□ 0.18
CNOT3-208ENST00000613073 PLA2G16P53816 162 aa16.16■□□□□ 0.18
CNOT3-208ENST00000613073 TMBIM6P55061 237 aa16.16■□□□□ 0.18
CNOT3-208ENST00000613073 ARPC4P59998 168 aa16.16■□□□□ 0.18
CNOT3-208ENST00000613073 FPGSQ05932 587 aa16.16■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 52.9 ms