RNA–Protein interactions for RNA: ENST00000612930.1

TSKU-205, Transcript of tsukushi, small leucine rich proteoglycan, humanhuman

APPRIS P1 TSL 4 BASIC

Gene TSKU, Length 2,666 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSKU-205ENST00000612930 GNG2P59768 71 aa16.27■□□□□ 0.2
TSKU-205ENST00000612930 SV2CQ496J9 727 aa16.27■□□□□ 0.2
TSKU-205ENST00000612930 ZFP69Q49AA0 526 aa16.27■□□□□ 0.2
TSKU-205ENST00000612930 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP16.27■□□□□ 0.2
TSKU-205ENST00000612930 GPR149Q86SP6 731 aa16.27■□□□□ 0.2
TSKU-205ENST00000612930 CCDC71Q8IV32 467 aaPredicted RBP16.27■□□□□ 0.2
TSKU-205ENST00000612930 GALNT12Q8IXK2 581 aa16.27■□□□□ 0.2
TSKU-205ENST00000612930 REM2Q8IYK8 340 aaPredicted RBP16.27■□□□□ 0.2
TSKU-205ENST00000612930 HCAR2Q8TDS4 363 aa16.27■□□□□ 0.2
TSKU-205ENST00000612930 FUBP1Q96AE4 644 aaKnown RBP16.27■□□□□ 0.2
TSKU-205ENST00000612930 MED30Q96HR3 178 aa16.27■□□□□ 0.2
TSKU-205ENST00000612930 DEPDC7Q96QD5 511 aa16.27■□□□□ 0.2
TSKU-205ENST00000612930 AARSD1Q9BTE6 412 aaKnown RBP16.27■□□□□ 0.2
TSKU-205ENST00000612930 C1QTNF3Q9BXJ4 246 aa16.27■□□□□ 0.2
TSKU-205ENST00000612930 SPATC1LQ9H0A9 340 aa16.27■□□□□ 0.2
TSKU-205ENST00000612930 MAGIXQ9H6Y5 334 aa16.27■□□□□ 0.2
TSKU-205ENST00000612930 SLC25A37Q9NYZ2 338 aa16.27■□□□□ 0.2
TSKU-205ENST00000612930 EHD3Q9NZN3 535 aa16.27■□□□□ 0.2
TSKU-205ENST00000612930 NIPSNAP3AQ9UFN0 247 aaPredicted RBP16.27■□□□□ 0.2
TSKU-205ENST00000612930 CCRL2O00421 344 aa16.27■□□□□ 0.19
TSKU-205ENST00000612930 CD3EAPO15446 510 aaKnown RBP16.27■□□□□ 0.19
TSKU-205ENST00000612930 SERPINA1P01009 418 aa16.27■□□□□ 0.19
TSKU-205ENST00000612930 DNTTP04053 509 aa16.27■□□□□ 0.19
TSKU-205ENST00000612930 SERPINF2P08697 491 aa16.27■□□□□ 0.19
TSKU-205ENST00000612930 PRSS56P0CW18 603 aa16.27■□□□□ 0.19
TSKU-205ENST00000612930 EFNA1P20827 205 aaPredicted RBP16.27■□□□□ 0.19
TSKU-205ENST00000612930 CCR1P32246 355 aa16.27■□□□□ 0.19
TSKU-205ENST00000612930 S100A5P33763 92 aa16.27■□□□□ 0.19
TSKU-205ENST00000612930 PNPLA4P41247 253 aa16.27■□□□□ 0.19
TSKU-205ENST00000612930 PPP3CCP48454 512 aa16.27■□□□□ 0.19
TSKU-205ENST00000612930 MFSD10Q14728 455 aa16.27■□□□□ 0.19
TSKU-205ENST00000612930 SOWAHCQ53LP3 525 aaPredicted RBP16.27■□□□□ 0.19
TSKU-205ENST00000612930 TIGD7Q6NT04 549 aaPredicted RBP16.27■□□□□ 0.19
TSKU-205ENST00000612930 NETO1Q8TDF5 533 aa16.27■□□□□ 0.19
TSKU-205ENST00000612930 GTF2H4Q92759 462 aa16.27■□□□□ 0.19
TSKU-205ENST00000612930 MYOCQ99972 504 aa16.27■□□□□ 0.19
TSKU-205ENST00000612930 DERL2Q9GZP9 239 aa16.27■□□□□ 0.19
TSKU-205ENST00000612930 NT5MQ9NPB1 228 aa16.27■□□□□ 0.19
TSKU-205ENST00000612930 RASSF1Q9NS23 344 aa16.27■□□□□ 0.19
TSKU-205ENST00000612930 OSER1Q9NX31 292 aa16.27■□□□□ 0.19
TSKU-205ENST00000612930 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP16.27■□□□□ 0.19
TSKU-205ENST00000612930 ERVW-1Q9UQF0 538 aa16.27■□□□□ 0.19
TSKU-205ENST00000612930 MED16Q9Y2X0 877 aa16.27■□□□□ 0.19
TSKU-205ENST00000612930 CENPXA8MT69 81 aa16.26■□□□□ 0.19
TSKU-205ENST00000612930 HHLA1C9JL84 531 aa16.26■□□□□ 0.19
TSKU-205ENST00000612930 MRPS14O60783 128 aaKnown RBP16.26■□□□□ 0.19
TSKU-205ENST00000612930 WBP4O75554 376 aaKnown RBP16.26■□□□□ 0.19
TSKU-205ENST00000612930 MLYCDO95822 493 aa16.26■□□□□ 0.19
TSKU-205ENST00000612930 GLP2RO95838 553 aa16.26■□□□□ 0.19
TSKU-205ENST00000612930 PEX11BO96011 259 aa16.26■□□□□ 0.19
TSKU-205ENST00000612930 MMP2P08253 660 aa16.26■□□□□ 0.19
TSKU-205ENST00000612930 DEFA1P59665 94 aa16.26■□□□□ 0.19
TSKU-205ENST00000612930 DEFA3P59666 94 aa16.26■□□□□ 0.19
TSKU-205ENST00000612930 ERVPABLB-1P60509 514 aa16.26■□□□□ 0.19
TSKU-205ENST00000612930 SIRPB2Q5JXA9 342 aa16.26■□□□□ 0.19
TSKU-205ENST00000612930 GPRIN3Q6ZVF9 776 aa16.26■□□□□ 0.19
TSKU-205ENST00000612930 SAMD7Q7Z3H4 446 aa16.26■□□□□ 0.19
TSKU-205ENST00000612930 AMER2Q8N7J2 671 aa16.26■□□□□ 0.19
TSKU-205ENST00000612930 OR52B6Q8NGF0 335 aa16.26■□□□□ 0.19
TSKU-205ENST00000612930 NCLNQ969V3 563 aa16.26■□□□□ 0.19
TSKU-205ENST00000612930 GDF15Q99988 308 aa16.26■□□□□ 0.19
TSKU-205ENST00000612930 NDRG4Q9ULP0 352 aaKnown RBP16.26■□□□□ 0.19
TSKU-205ENST00000612930 POLR3HQ9Y535 204 aaPredicted RBP16.26■□□□□ 0.19
TSKU-205ENST00000612930 NPEPPSL1A6NEC2 478 aa16.26■□□□□ 0.19
TSKU-205ENST00000612930 STX16O14662 325 aa16.26■□□□□ 0.19
TSKU-205ENST00000612930 APOA1P02647 267 aa16.26■□□□□ 0.19
TSKU-205ENST00000612930 RETP07949 1114 aa16.26■□□□□ 0.19
TSKU-205ENST00000612930 HOXA9P31269 272 aa16.26■□□□□ 0.19
TSKU-205ENST00000612930 CTSKP43235 329 aa16.26■□□□□ 0.19
TSKU-205ENST00000612930 NRIP1P48552 1158 aa16.26■□□□□ 0.19
TSKU-205ENST00000612930 DSC2Q02487 901 aa16.26■□□□□ 0.19
TSKU-205ENST00000612930 ITKQ08881 620 aa16.26■□□□□ 0.19
TSKU-205ENST00000612930 GTDC1Q4AE62 458 aa16.26■□□□□ 0.19
TSKU-205ENST00000612930 BCL7AQ4VC05 210 aa16.26■□□□□ 0.19
TSKU-205ENST00000612930 KDM4DQ6B0I6 523 aa16.26■□□□□ 0.19
TSKU-205ENST00000612930 PHACTR4Q8IZ21 702 aa16.26■□□□□ 0.19
TSKU-205ENST00000612930 TOP6BLQ8N6T0 577 aa16.26■□□□□ 0.19
TSKU-205ENST00000612930 OR56A4Q8NGH8 313 aa16.26■□□□□ 0.19
TSKU-205ENST00000612930 EGLN2Q96KS0 407 aa16.26■□□□□ 0.19
TSKU-205ENST00000612930 NUAK2Q9H093 628 aa16.26■□□□□ 0.19
TSKU-205ENST00000612930 GABARAPL1Q9H0R8 117 aa16.26■□□□□ 0.19
TSKU-205ENST00000612930 RNF39Q9H2S5 420 aa16.26■□□□□ 0.19
TSKU-205ENST00000612930 TRMT13Q9NUP7 481 aaKnown RBP16.26■□□□□ 0.19
TSKU-205ENST00000612930 CRNNQ9UBG3 495 aaPredicted RBP16.26■□□□□ 0.19
TSKU-205ENST00000612930 FAM50BQ9Y247 325 aa16.26■□□□□ 0.19
TSKU-205ENST00000612930 WBP11Q9Y2W2 641 aaKnown RBP16.26■□□□□ 0.19
TSKU-205ENST00000612930 ANKRD36A6QL64 1941 aa16.26■□□□□ 0.19
TSKU-205ENST00000612930 LOC105371267A0A1B0GV96 52 aa16.25■□□□□ 0.19
TSKU-205ENST00000612930 IFRD1O00458 451 aaPredicted RBP16.25■□□□□ 0.19
TSKU-205ENST00000612930 SNX4O95219 450 aa16.25■□□□□ 0.19
TSKU-205ENST00000612930 MED26O95402 600 aa16.25■□□□□ 0.19
TSKU-205ENST00000612930 ZNF286BP0CG31 522 aa16.25■□□□□ 0.19
TSKU-205ENST00000612930 P2RX3P56373 397 aa16.25■□□□□ 0.19
TSKU-205ENST00000612930 RFTN2Q52LD8 501 aaPredicted RBP16.25■□□□□ 0.19
TSKU-205ENST00000612930 Q5BKY6 102 aa16.25■□□□□ 0.19
TSKU-205ENST00000612930 C10orf111Q8N326 155 aa16.25■□□□□ 0.19
TSKU-205ENST00000612930 TTC29Q8NA56 475 aaPredicted RBP16.25■□□□□ 0.19
TSKU-205ENST00000612930 SLC13A3Q8WWT9 602 aa16.25■□□□□ 0.19
TSKU-205ENST00000612930 APOL4Q9BPW4 351 aa16.25■□□□□ 0.19
TSKU-205ENST00000612930 C14orf119Q9NWQ9 140 aa16.25■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms