RNA–Protein interactions for RNA: ENST00000612856.4

FAM3A-221, Transcript of family with sequence similarity 3 member A, humanhuman

TSL 2

Gene FAM3A, Length 3,995 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FAM3A-221ENST00000612856 SMYD5Q6GMV2 418 aa10.67□□□□□ -0.7
FAM3A-221ENST00000612856 NIPAL1Q6NVV3 410 aa10.67□□□□□ -0.7
FAM3A-221ENST00000612856 MTSS1LQ765P7 747 aa10.67□□□□□ -0.7
FAM3A-221ENST00000612856 ADGRD2Q7Z7M1 963 aa10.67□□□□□ -0.7
FAM3A-221ENST00000612856 ZNF557Q8N988 423 aaPredicted RBP10.67□□□□□ -0.7
FAM3A-221ENST00000612856 SIDT2Q8NBJ9 832 aaKnown RBP10.67□□□□□ -0.7
FAM3A-221ENST00000612856 ACDQ96AP0 544 aa10.67□□□□□ -0.7
FAM3A-221ENST00000612856 CPNE1Q99829 537 aa10.67□□□□□ -0.7
FAM3A-221ENST00000612856 SLC39A3Q9BRY0 314 aa10.67□□□□□ -0.7
FAM3A-221ENST00000612856 FAM126AQ9BYI3 521 aaPredicted RBP10.67□□□□□ -0.7
FAM3A-221ENST00000612856 C1orf21Q9H246 121 aa10.67□□□□□ -0.7
FAM3A-221ENST00000612856 ZNF696Q9H7X3 374 aa10.67□□□□□ -0.7
FAM3A-221ENST00000612856 TMEM216Q9P0N5 145 aa10.67□□□□□ -0.7
FAM3A-221ENST00000612856 RABL2BQ9UNT1 228 aa10.67□□□□□ -0.7
FAM3A-221ENST00000612856 WDR87Q6ZQQ6 2873 aa10.66□□□□□ -0.7
FAM3A-221ENST00000612856 MYO1GB0I1T2 1018 aa10.66□□□□□ -0.7
FAM3A-221ENST00000612856 H3BNX3 289 aa10.66□□□□□ -0.7
FAM3A-221ENST00000612856 GMFGO60234 142 aa10.66□□□□□ -0.7
FAM3A-221ENST00000612856 VIPP01282 170 aa10.66□□□□□ -0.7
FAM3A-221ENST00000612856 HSPA7P48741 367 aa10.66□□□□□ -0.7
FAM3A-221ENST00000612856 ZBED5Q49AG3 693 aa10.66□□□□□ -0.7
FAM3A-221ENST00000612856 LRRC66Q68CR7 880 aa10.66□□□□□ -0.7
FAM3A-221ENST00000612856 DHFR2Q86XF0 187 aa10.66□□□□□ -0.7
FAM3A-221ENST00000612856 PLD3Q8IV08 490 aa10.66□□□□□ -0.7
FAM3A-221ENST00000612856 NRSN1Q8IZ57 195 aa10.66□□□□□ -0.7
FAM3A-221ENST00000612856 NAT8LQ8N9F0 302 aa10.66□□□□□ -0.7
FAM3A-221ENST00000612856 HHIPQ96QV1 700 aa10.66□□□□□ -0.7
FAM3A-221ENST00000612856 SLC29A1Q99808 456 aa10.66□□□□□ -0.7
FAM3A-221ENST00000612856 RTKNQ9BST9 563 aa10.66□□□□□ -0.7
FAM3A-221ENST00000612856 TBCDQ9BTW9 1192 aa10.66□□□□□ -0.7
FAM3A-221ENST00000612856 REXO4Q9GZR2 422 aaKnown RBP10.66□□□□□ -0.7
FAM3A-221ENST00000612856 TOR3AQ9H497 397 aa10.66□□□□□ -0.7
FAM3A-221ENST00000612856 SSU72Q9NP77 194 aaKnown RBP10.66□□□□□ -0.7
FAM3A-221ENST00000612856 TCRBV21S2A2A0A5A6 115 aa10.66□□□□□ -0.7
FAM3A-221ENST00000612856 LRRC72A6NJI9 287 aa10.66□□□□□ -0.7
FAM3A-221ENST00000612856 M0QZQ0 153 aa10.66□□□□□ -0.7
FAM3A-221ENST00000612856 GABRDO14764 452 aa10.66□□□□□ -0.7
FAM3A-221ENST00000612856 LINC01565O15544 149 aa10.66□□□□□ -0.7
FAM3A-221ENST00000612856 PKMP14618 531 aaKnown RBP10.66□□□□□ -0.7
FAM3A-221ENST00000612856 ETV3P41162 512 aa10.66□□□□□ -0.7
FAM3A-221ENST00000612856 ETV4P43268 484 aa10.66□□□□□ -0.7
FAM3A-221ENST00000612856 MAPKAPK2P49137 400 aa10.66□□□□□ -0.7
FAM3A-221ENST00000612856 ZNF135P52742 658 aaPredicted RBP10.66□□□□□ -0.7
FAM3A-221ENST00000612856 NANOGP8Q6NSW7 305 aa10.66□□□□□ -0.7
FAM3A-221ENST00000612856 UBE2R2Q712K3 238 aaPredicted RBP10.66□□□□□ -0.7
FAM3A-221ENST00000612856 RRM2BQ7LG56 351 aa10.66□□□□□ -0.7
FAM3A-221ENST00000612856 FAM129CQ86XR2 697 aa10.66□□□□□ -0.7
FAM3A-221ENST00000612856 SETD7Q8WTS6 366 aaKnown RBP10.66□□□□□ -0.7
FAM3A-221ENST00000612856 SLC35B4Q969S0 331 aa10.66□□□□□ -0.7
FAM3A-221ENST00000612856 FBXL20Q96IG2 436 aa10.66□□□□□ -0.7
FAM3A-221ENST00000612856 DMRTB1Q96MA1 342 aa10.66□□□□□ -0.7
FAM3A-221ENST00000612856 BTBD1Q9H0C5 482 aa10.66□□□□□ -0.7
FAM3A-221ENST00000612856 LAMA3Q16787 3333 aa10.66□□□□□ -0.7
FAM3A-221ENST00000612856 PAPPA2Q9BXP8 1791 aa10.66□□□□□ -0.7
FAM3A-221ENST00000612856 C5orf58C9J3I9 102 aa10.66□□□□□ -0.7
FAM3A-221ENST00000612856 FGF19O95750 216 aa10.66□□□□□ -0.7
FAM3A-221ENST00000612856 GNAO1P09471 354 aa10.66□□□□□ -0.7
FAM3A-221ENST00000612856 CPOXP36551 454 aa10.66□□□□□ -0.7
FAM3A-221ENST00000612856 MTHFRP42898 656 aa10.66□□□□□ -0.7
FAM3A-221ENST00000612856 MAGEA11P43364 429 aa10.66□□□□□ -0.7
FAM3A-221ENST00000612856 CCR10P46092 362 aa10.66□□□□□ -0.7
FAM3A-221ENST00000612856 ILF3Q12906 894 aaKnown RBP eCLIP10.66□□□□□ -0.7
FAM3A-221ENST00000612856 SIRPB2Q5JXA9 342 aa10.66□□□□□ -0.7
FAM3A-221ENST00000612856 GRTP1Q5TC63 336 aa10.66□□□□□ -0.7
FAM3A-221ENST00000612856 C22orf39Q6P5X5 142 aa10.66□□□□□ -0.7
FAM3A-221ENST00000612856 AFTPHQ6ULP2 937 aa10.66□□□□□ -0.7
FAM3A-221ENST00000612856 TMPRSS11BQ86T26 416 aa10.66□□□□□ -0.7
FAM3A-221ENST00000612856 SLCO6A1Q86UG4 719 aa10.66□□□□□ -0.7
FAM3A-221ENST00000612856 TNIP2Q8NFZ5 429 aa10.66□□□□□ -0.7
FAM3A-221ENST00000612856 DEPDC7Q96QD5 511 aa10.66□□□□□ -0.7
FAM3A-221ENST00000612856 CHID1Q9BWS9 393 aa10.66□□□□□ -0.7
FAM3A-221ENST00000612856 VRTNQ9H8Y1 702 aa10.66□□□□□ -0.7
FAM3A-221ENST00000612856 KANSL1LA0AUZ9 987 aa10.65□□□□□ -0.7
FAM3A-221ENST00000612856 ILVBLA1L0T0 632 aa10.65□□□□□ -0.7
FAM3A-221ENST00000612856 CHRNGP07510 517 aa10.65□□□□□ -0.7
FAM3A-221ENST00000612856 ANXA5P08758 320 aa10.65□□□□□ -0.7
FAM3A-221ENST00000612856 PREPP48147 710 aa10.65□□□□□ -0.7
FAM3A-221ENST00000612856 IST1P53990 364 aa10.65□□□□□ -0.7
FAM3A-221ENST00000612856 TFF2Q03403 129 aa10.65□□□□□ -0.7
FAM3A-221ENST00000612856 DSC3Q14574 896 aa10.65□□□□□ -0.7
FAM3A-221ENST00000612856 INPP5AQ14642 412 aa10.65□□□□□ -0.7
FAM3A-221ENST00000612856 TSNQ15631 228 aaKnown RBP10.65□□□□□ -0.7
FAM3A-221ENST00000612856 XKR6Q5GH73 641 aa10.65□□□□□ -0.7
FAM3A-221ENST00000612856 AKAP14Q86UN6 197 aa10.65□□□□□ -0.7
FAM3A-221ENST00000612856 GALNT13Q8IUC8 556 aa10.65□□□□□ -0.7
FAM3A-221ENST00000612856 PHYKPLQ8IUZ5 450 aa10.65□□□□□ -0.7
FAM3A-221ENST00000612856 LILRA2Q8N149 483 aa10.65□□□□□ -0.7
FAM3A-221ENST00000612856 KCT2Q8NC54 265 aa10.65□□□□□ -0.7
FAM3A-221ENST00000612856 C6orf62Q9GZU0 229 aaPredicted RBP10.65□□□□□ -0.7
FAM3A-221ENST00000612856 EPB41L1Q9H4G0 881 aa10.65□□□□□ -0.7
FAM3A-221ENST00000612856 ANKRD66B4E2M5 251 aa10.65□□□□□ -0.7
FAM3A-221ENST00000612856 NADKO95544 446 aaPredicted RBP10.65□□□□□ -0.7
FAM3A-221ENST00000612856 IFNA16P05015 189 aa10.65□□□□□ -0.7
FAM3A-221ENST00000612856 ALOX12P18054 663 aa10.65□□□□□ -0.7
FAM3A-221ENST00000612856 DGKAP23743 735 aa10.65□□□□□ -0.7
FAM3A-221ENST00000612856 IL4RP24394 825 aa10.65□□□□□ -0.7
FAM3A-221ENST00000612856 SPAM1P38567 509 aa10.65□□□□□ -0.7
FAM3A-221ENST00000612856 GDF5P43026 501 aa10.65□□□□□ -0.7
FAM3A-221ENST00000612856 HYAL2Q12891 473 aa10.65□□□□□ -0.7
FAM3A-221ENST00000612856 CEACAM7Q14002 265 aa10.65□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms