RNA–Protein interactions for RNA: ENST00000610462.1

CSPG5-205, Transcript of chondroitin sulfate proteoglycan 5, humanhuman

TSL 5 BASIC

Gene CSPG5, Length 2,073 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSPG5-205ENST00000610462 HIST1H2AGP0C0S8 130 aaPredicted RBP27.44■■□□□ 1.98
CSPG5-205ENST00000610462 HIST1H2ADP20671 130 aa27.44■■□□□ 1.98
CSPG5-205ENST00000610462 XPAP23025 273 aaPredicted RBP27.44■■□□□ 1.98
CSPG5-205ENST00000610462 JAK1P23458 1154 aa27.44■■□□□ 1.98
CSPG5-205ENST00000610462 GSK3BP49841 420 aa27.44■■□□□ 1.98
CSPG5-205ENST00000610462 EEFSECP57772 596 aaKnown RBP27.44■■□□□ 1.98
CSPG5-205ENST00000610462 RPL38P63173 70 aaKnown RBP27.44■■□□□ 1.98
CSPG5-205ENST00000610462 SP140Q13342 867 aa27.44■■□□□ 1.98
CSPG5-205ENST00000610462 PDK3Q15120 406 aa27.44■■□□□ 1.98
CSPG5-205ENST00000610462 RABL3Q5HYI8 236 aa27.44■■□□□ 1.98
CSPG5-205ENST00000610462 HENMT1Q5T8I9 393 aaKnown RBP27.44■■□□□ 1.98
CSPG5-205ENST00000610462 KIAA2013Q8IYS2 634 aa27.44■■□□□ 1.98
CSPG5-205ENST00000610462 GOLM1Q8NBJ4 401 aa27.44■■□□□ 1.98
CSPG5-205ENST00000610462 SKA2Q8WVK7 121 aaPredicted RBP27.44■■□□□ 1.98
CSPG5-205ENST00000610462 CANT1Q8WVQ1 401 aa27.44■■□□□ 1.98
CSPG5-205ENST00000610462 USP7Q93009 1102 aa27.44■■□□□ 1.98
CSPG5-205ENST00000610462 TIFAQ96CG3 184 aa27.44■■□□□ 1.98
CSPG5-205ENST00000610462 HIST1H2AHQ96KK5 128 aa27.44■■□□□ 1.98
CSPG5-205ENST00000610462 HIST1H2AJQ99878 128 aa27.44■■□□□ 1.98
CSPG5-205ENST00000610462 H2AFJQ9BTM1 129 aa27.44■■□□□ 1.98
CSPG5-205ENST00000610462 TRIM8Q9BZR9 551 aa27.44■■□□□ 1.98
CSPG5-205ENST00000610462 ALG2Q9H553 416 aa27.44■■□□□ 1.98
CSPG5-205ENST00000610462 SLAMF8Q9P0V8 285 aa27.44■■□□□ 1.98
CSPG5-205ENST00000610462 DPP7Q9UHL4 492 aa27.44■■□□□ 1.98
CSPG5-205ENST00000610462 EIF3LQ9Y262 564 aaKnown RBP27.44■■□□□ 1.98
CSPG5-205ENST00000610462 C15orf38-AP3S2A0A0A6YYH1 394 aa27.43■■□□□ 1.98
CSPG5-205ENST00000610462 RB1P06400 928 aa27.43■■□□□ 1.98
CSPG5-205ENST00000610462 ZCCHC18P0CG32 403 aa27.43■■□□□ 1.98
CSPG5-205ENST00000610462 EPORP19235 508 aa27.43■■□□□ 1.98
CSPG5-205ENST00000610462 HSPA13P48723 471 aa27.43■■□□□ 1.98
CSPG5-205ENST00000610462 SLC2A7Q6PXP3 512 aa27.43■■□□□ 1.98
CSPG5-205ENST00000610462 NEK10Q6ZWH5 1172 aa27.43■■□□□ 1.98
CSPG5-205ENST00000610462 ARPINQ7Z6K5 226 aa27.43■■□□□ 1.98
CSPG5-205ENST00000610462 ZSCAN5AQ9BUG6 496 aa27.43■■□□□ 1.98
CSPG5-205ENST00000610462 RIOK2Q9BVS4 552 aaKnown RBP27.43■■□□□ 1.98
CSPG5-205ENST00000610462 GFYI3L273 518 aa27.42■■□□□ 1.98
CSPG5-205ENST00000610462 SGTAO43765 313 aa27.42■■□□□ 1.98
CSPG5-205ENST00000610462 HNMTP50135 292 aa27.42■■□□□ 1.98
CSPG5-205ENST00000610462 LIPEQ05469 1076 aa27.42■■□□□ 1.98
CSPG5-205ENST00000610462 NANOGP8Q6NSW7 305 aa27.42■■□□□ 1.98
CSPG5-205ENST00000610462 PRR23BQ6ZRT6 265 aa27.42■■□□□ 1.98
CSPG5-205ENST00000610462 SPPL2CQ8IUH8 684 aa27.42■■□□□ 1.98
CSPG5-205ENST00000610462 MARVELD2Q8N4S9 558 aa27.42■■□□□ 1.98
CSPG5-205ENST00000610462 DDHD1Q8NEL9 900 aa27.42■■□□□ 1.98
CSPG5-205ENST00000610462 EME1Q96AY2 570 aa27.42■■□□□ 1.98
CSPG5-205ENST00000610462 SEMA6AQ9H2E6 1030 aa27.42■■□□□ 1.98
CSPG5-205ENST00000610462 NANOGQ9H9S0 305 aa27.42■■□□□ 1.98
CSPG5-205ENST00000610462 CCM2LQ9NUG4 571 aaPredicted RBP27.42■■□□□ 1.98
CSPG5-205ENST00000610462 INTS7Q9NVH2 962 aaKnown RBP27.42■■□□□ 1.98
CSPG5-205ENST00000610462 SNX13Q9Y5W8 968 aa27.42■■□□□ 1.98
CSPG5-205ENST00000610462 PRRC2BQ5JSZ5 2229 aaKnown RBP27.42■■□□□ 1.98
CSPG5-205ENST00000610462 C16orf96A6NNT2 1141 aa27.42■■□□□ 1.98
CSPG5-205ENST00000610462 HOXC11O43248 304 aaPredicted RBP27.42■■□□□ 1.98
CSPG5-205ENST00000610462 GNPDA1P46926 289 aa27.42■■□□□ 1.98
CSPG5-205ENST00000610462 INPP5AQ14642 412 aa27.42■■□□□ 1.98
CSPG5-205ENST00000610462 UBE2Q1Q7Z7E8 422 aa27.42■■□□□ 1.98
CSPG5-205ENST00000610462 PTRH1Q86Y79 214 aaKnown RBP27.42■■□□□ 1.98
CSPG5-205ENST00000610462 GALNT13Q8IUC8 556 aa27.42■■□□□ 1.98
CSPG5-205ENST00000610462 OSCP1Q8WVF1 389 aa27.42■■□□□ 1.98
CSPG5-205ENST00000610462 PABPN1LA6NDY0 278 aaKnown RBP27.41■■□□□ 1.98
CSPG5-205ENST00000610462 FADS2P1A8MWK0 482 aa27.41■■□□□ 1.98
CSPG5-205ENST00000610462 ARPC2O15144 300 aa27.41■■□□□ 1.98
CSPG5-205ENST00000610462 RSL1D1O76021 490 aaKnown RBP27.41■■□□□ 1.98
CSPG5-205ENST00000610462 CYP2A7P20853 494 aa27.41■■□□□ 1.98
CSPG5-205ENST00000610462 VARSP26640 1264 aaKnown RBP27.41■■□□□ 1.98
CSPG5-205ENST00000610462 HMGCS1Q01581 520 aa27.41■■□□□ 1.98
CSPG5-205ENST00000610462 IMPG1Q17R60 797 aa27.41■■□□□ 1.98
CSPG5-205ENST00000610462 ZXDCQ2QGD7 858 aaPredicted RBP27.41■■□□□ 1.98
CSPG5-205ENST00000610462 TCEAL5Q5H9L2 206 aa27.41■■□□□ 1.98
CSPG5-205ENST00000610462 HMBOX1Q6NT76 420 aa27.41■■□□□ 1.98
CSPG5-205ENST00000610462 TECPR1Q7Z6L1 1165 aa27.41■■□□□ 1.98
CSPG5-205ENST00000610462 HID1Q8IV36 788 aa27.41■■□□□ 1.98
CSPG5-205ENST00000610462 GALNT4Q8N4A0 578 aa27.41■■□□□ 1.98
CSPG5-205ENST00000610462 PIP4K2CQ8TBX8 421 aa27.41■■□□□ 1.98
CSPG5-205ENST00000610462 ELMO1Q92556 727 aa27.41■■□□□ 1.98
CSPG5-205ENST00000610462 KCTD14Q9BQ13 255 aaPredicted RBP27.41■■□□□ 1.98
CSPG5-205ENST00000610462 ACTR8Q9H981 624 aa27.41■■□□□ 1.98
CSPG5-205ENST00000610462 PIDD1Q9HB75 910 aa27.41■■□□□ 1.98
CSPG5-205ENST00000610462 KRT6AP02538 564 aa27.4■■□□□ 1.98
CSPG5-205ENST00000610462 FTH1P02794 183 aa27.4■■□□□ 1.98
CSPG5-205ENST00000610462 KRT6BP04259 564 aa27.4■■□□□ 1.98
CSPG5-205ENST00000610462 ZNF26P17031 533 aaPredicted RBP27.4■■□□□ 1.98
CSPG5-205ENST00000610462 SLC6A12P48065 614 aa27.4■■□□□ 1.98
CSPG5-205ENST00000610462 KRT6CP48668 564 aa27.4■■□□□ 1.98
CSPG5-205ENST00000610462 SGO1Q5FBB7 561 aa27.4■■□□□ 1.98
CSPG5-205ENST00000610462 C12orf40Q86WS4 652 aa27.4■■□□□ 1.98
CSPG5-205ENST00000610462 RGL4Q8IZJ4 473 aa27.4■■□□□ 1.98
CSPG5-205ENST00000610462 KIAA1958Q8N8K9 716 aa27.4■■□□□ 1.98
CSPG5-205ENST00000610462 RSPRY1Q96DX4 576 aa27.4■■□□□ 1.98
CSPG5-205ENST00000610462 LRTM1Q9HBL6 345 aa27.4■■□□□ 1.98
CSPG5-205ENST00000610462 ASIC5Q9NY37 505 aa27.4■■□□□ 1.98
CSPG5-205ENST00000610462 AP4B1Q9Y6B7 739 aa27.4■■□□□ 1.98
CSPG5-205ENST00000610462 H0YJX3 145 aa27.4■■□□□ 1.98
CSPG5-205ENST00000610462 ADH1CP00326 375 aa27.4■■□□□ 1.98
CSPG5-205ENST00000610462 ST8SIA6P61647 398 aa27.4■■□□□ 1.98
CSPG5-205ENST00000610462 KIAA0040Q15053 153 aa27.4■■□□□ 1.98
CSPG5-205ENST00000610462 ZNF284Q2VY69 593 aa27.4■■□□□ 1.98
CSPG5-205ENST00000610462 DLEU7Q6UYE1 221 aa27.4■■□□□ 1.98
CSPG5-205ENST00000610462 TMEM74Q96NL1 305 aa27.4■■□□□ 1.98
CSPG5-205ENST00000610462 SLC27A6Q9Y2P4 619 aa27.4■■□□□ 1.98
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms