RNA–Protein interactions for RNA: ENST00000609104.5

USP6NL-205, Transcript of USP6 N-terminal like, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene USP6NL, Length 11,377 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP6NL-205ENST00000609104 ZNF12P17014 697 aa12.88□□□□□ -0.35
USP6NL-205ENST00000609104 PDX1P52945 283 aa12.88□□□□□ -0.35
USP6NL-205ENST00000609104 LIMK2P53671 638 aa12.88□□□□□ -0.35
USP6NL-205ENST00000609104 DCDC1P59894 354 aa12.88□□□□□ -0.35
USP6NL-205ENST00000609104 CHIT1Q13231 466 aa12.88□□□□□ -0.35
USP6NL-205ENST00000609104 IFI44LQ53G44 452 aa12.88□□□□□ -0.35
USP6NL-205ENST00000609104 CHRDL2Q6WN34 429 aa12.88□□□□□ -0.35
USP6NL-205ENST00000609104 PYROXD2Q8N2H3 581 aa12.88□□□□□ -0.35
USP6NL-205ENST00000609104 NSMCE3Q96MG7 304 aa12.88□□□□□ -0.35
USP6NL-205ENST00000609104 ZNF350Q9GZX5 532 aa12.88□□□□□ -0.35
USP6NL-205ENST00000609104 PAK6Q9NQU5 681 aaPredicted RBP12.88□□□□□ -0.35
USP6NL-205ENST00000609104 COPS7AQ9UBW8 275 aa12.88□□□□□ -0.35
USP6NL-205ENST00000609104 KERAO60938 352 aa12.88□□□□□ -0.35
USP6NL-205ENST00000609104 CPNE3O75131 537 aaKnown RBP12.88□□□□□ -0.35
USP6NL-205ENST00000609104 ABCA11PQ4W5N1 156 aa12.88□□□□□ -0.35
USP6NL-205ENST00000609104 EEF1DP3Q658K8 133 aa12.88□□□□□ -0.35
USP6NL-205ENST00000609104 KAT8Q9H7Z6 458 aaKnown RBP12.88□□□□□ -0.35
USP6NL-205ENST00000609104 RLN2P04090 185 aa12.87□□□□□ -0.35
USP6NL-205ENST00000609104 PRKCHP24723 683 aa12.87□□□□□ -0.35
USP6NL-205ENST00000609104 KANTRA0A1W2PQU2 76 aa12.87□□□□□ -0.35
USP6NL-205ENST00000609104 APODP05090 189 aa12.87□□□□□ -0.35
USP6NL-205ENST00000609104 CLCN4P51793 760 aa12.87□□□□□ -0.35
USP6NL-205ENST00000609104 SLC13A2Q13183 592 aa12.87□□□□□ -0.35
USP6NL-205ENST00000609104 TEAD4Q15561 434 aa12.87□□□□□ -0.35
USP6NL-205ENST00000609104 CAND1Q86VP6 1230 aaKnown RBP12.87□□□□□ -0.35
USP6NL-205ENST00000609104 PLCZ1Q86YW0 608 aa12.87□□□□□ -0.35
USP6NL-205ENST00000609104 UNC5BQ8IZJ1 945 aa12.87□□□□□ -0.35
USP6NL-205ENST00000609104 ANKRA2Q9H9E1 313 aa12.87□□□□□ -0.35
USP6NL-205ENST00000609104 RGS17Q9UGC6 210 aaPredicted RBP12.87□□□□□ -0.35
USP6NL-205ENST00000609104 LRCH4O75427 683 aa12.87□□□□□ -0.35
USP6NL-205ENST00000609104 RPL19P84098 196 aaKnown RBP12.87□□□□□ -0.35
USP6NL-205ENST00000609104 GALNT13Q8IUC8 556 aa12.87□□□□□ -0.35
USP6NL-205ENST00000609104 NRSN1Q8IZ57 195 aa12.87□□□□□ -0.35
USP6NL-205ENST00000609104 SMPDL3BQ92485 455 aa12.87□□□□□ -0.35
USP6NL-205ENST00000609104 HIST1H2AAQ96QV6 131 aa12.87□□□□□ -0.35
USP6NL-205ENST00000609104 PCDHGC4Q9Y5F7 938 aa12.87□□□□□ -0.35
USP6NL-205ENST00000609104 CLPXO76031 633 aa12.87□□□□□ -0.35
USP6NL-205ENST00000609104 OR3A3P47888 321 aa12.87□□□□□ -0.35
USP6NL-205ENST00000609104 OR3A2P47893 321 aa12.87□□□□□ -0.35
USP6NL-205ENST00000609104 PHC1P78364 1004 aa12.87□□□□□ -0.35
USP6NL-205ENST00000609104 ALG1LQ6GMV1 187 aa12.87□□□□□ -0.35
USP6NL-205ENST00000609104 SLC8B1Q6J4K2 584 aa12.87□□□□□ -0.35
USP6NL-205ENST00000609104 ASB18Q6ZVZ8 466 aa12.87□□□□□ -0.35
USP6NL-205ENST00000609104 CHST9Q7L1S5 443 aa12.87□□□□□ -0.35
USP6NL-205ENST00000609104 CPNE9Q8IYJ1 553 aa12.87□□□□□ -0.35
USP6NL-205ENST00000609104 COX18Q8N8Q8 333 aa12.87□□□□□ -0.35
USP6NL-205ENST00000609104 TRIM43Q96BQ3 446 aaPredicted RBP12.87□□□□□ -0.35
USP6NL-205ENST00000609104 RBM18Q96H35 190 aaKnown RBP12.87□□□□□ -0.35
USP6NL-205ENST00000609104 TTPALQ9BTX7 342 aa12.87□□□□□ -0.35
USP6NL-205ENST00000609104 CADM1Q9BY67 442 aaKnown RBP12.87□□□□□ -0.35
USP6NL-205ENST00000609104 POMPQ9Y244 141 aa12.87□□□□□ -0.35
USP6NL-205ENST00000609104 INSIG1O15503 277 aa12.87□□□□□ -0.35
USP6NL-205ENST00000609104 LCP2Q13094 533 aa12.87□□□□□ -0.35
USP6NL-205ENST00000609104 CLEC12AQ5QGZ9 265 aa12.87□□□□□ -0.35
USP6NL-205ENST00000609104 METTL21CQ5VZV1 264 aa12.87□□□□□ -0.35
USP6NL-205ENST00000609104 ARL5AQ9Y689 179 aa12.87□□□□□ -0.35
USP6NL-205ENST00000609104 GRIK5Q16478 980 aa12.87□□□□□ -0.35
USP6NL-205ENST00000609104 SLC22A15Q8IZD6 547 aa12.87□□□□□ -0.35
USP6NL-205ENST00000609104 NXPE1Q8N323 547 aa12.87□□□□□ -0.35
USP6NL-205ENST00000609104 ZSCAN5AQ9BUG6 496 aa12.87□□□□□ -0.35
USP6NL-205ENST00000609104 WASF2Q9Y6W5 498 aa12.87□□□□□ -0.35
USP6NL-205ENST00000609104 SLC9B1Q4ZJI4 515 aa12.87□□□□□ -0.35
USP6NL-205ENST00000609104 RAB2BQ8WUD1 216 aa12.87□□□□□ -0.35
USP6NL-205ENST00000609104 SGCDQ92629 289 aa12.87□□□□□ -0.35
USP6NL-205ENST00000609104 SLC35G5Q96KT7 338 aa12.87□□□□□ -0.35
USP6NL-205ENST00000609104 TAPBPLQ9BX59 468 aa12.87□□□□□ -0.35
USP6NL-205ENST00000609104 BRD7Q9NPI1 651 aa12.87□□□□□ -0.35
USP6NL-205ENST00000609104 DAPL1A0PJW8 107 aa12.87□□□□□ -0.35
USP6NL-205ENST00000609104 MATN2O00339 956 aa12.87□□□□□ -0.35
USP6NL-205ENST00000609104 SLC2A2P11168 524 aaPredicted RBP12.87□□□□□ -0.35
USP6NL-205ENST00000609104 CLCN7P51798 805 aa12.87□□□□□ -0.35
USP6NL-205ENST00000609104 GBX2P52951 348 aaPredicted RBP12.87□□□□□ -0.35
USP6NL-205ENST00000609104 MTFR1LQ9H019 292 aa12.87□□□□□ -0.35
USP6NL-205ENST00000609104 MAGEE1Q9HCI5 957 aa12.87□□□□□ -0.35
USP6NL-205ENST00000609104 PCDHAC2Q9Y5I4 1007 aa12.87□□□□□ -0.35
USP6NL-205ENST00000609104 L7N2F9 121 aa12.87□□□□□ -0.35
USP6NL-205ENST00000609104 PAX3P23760 479 aa12.87□□□□□ -0.35
USP6NL-205ENST00000609104 VAMP2P63027 116 aa12.87□□□□□ -0.35
USP6NL-205ENST00000609104 SYVN1Q86TM6 617 aa12.87□□□□□ -0.35
USP6NL-205ENST00000609104 CPA6Q8N4T0 437 aa12.87□□□□□ -0.35
USP6NL-205ENST00000609104 C7orf57Q8NEG2 295 aa12.87□□□□□ -0.35
USP6NL-205ENST00000609104 CEP76Q8TAP6 659 aa12.87□□□□□ -0.35
USP6NL-205ENST00000609104 TMED9Q9BVK6 235 aa12.87□□□□□ -0.35
USP6NL-205ENST00000609104 USF2Q15853 346 aaPredicted RBP12.86□□□□□ -0.35
USP6NL-205ENST00000609104 MAPK14Q16539 360 aa12.86□□□□□ -0.35
USP6NL-205ENST00000609104 PLEKHG6Q3KR16 790 aa12.86□□□□□ -0.35
USP6NL-205ENST00000609104 LCLAT1Q6UWP7 414 aa12.86□□□□□ -0.35
USP6NL-205ENST00000609104 ANKFN1Q8N957 763 aa12.86□□□□□ -0.35
USP6NL-205ENST00000609104 SRFBP1Q8NEF9 429 aaKnown RBP12.86□□□□□ -0.35
USP6NL-205ENST00000609104 CDK15Q96Q40 435 aa12.86□□□□□ -0.35
USP6NL-205ENST00000609104 ZNF282Q9UDV7 671 aaPredicted RBP12.86□□□□□ -0.35
USP6NL-205ENST00000609104 SPEF1Q9Y4P9 236 aa12.86□□□□□ -0.35
USP6NL-205ENST00000609104 HNRNPH3P31942 346 aaKnown RBP12.86□□□□□ -0.35
USP6NL-205ENST00000609104 MAP3K8P41279 467 aa12.86□□□□□ -0.35
USP6NL-205ENST00000609104 NUP54Q7Z3B4 507 aa12.86□□□□□ -0.35
USP6NL-205ENST00000609104 SCELO95171 688 aa12.86□□□□□ -0.35
USP6NL-205ENST00000609104 CCNCP24863 283 aa12.86□□□□□ -0.35
USP6NL-205ENST00000609104 TMEM220Q6QAJ8 160 aa12.86□□□□□ -0.35
USP6NL-205ENST00000609104 CERS6Q6ZMG9 384 aa12.86□□□□□ -0.35
USP6NL-205ENST00000609104 HTATIP2Q9BUP3 242 aa12.86□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms