RNA–Protein interactions for RNA: ENST00000608621.5

POLR2J3-219, Transcript of RNA polymerase II subunit J3, humanhuman

TSL 4

Gene POLR2J3, Length 544 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2J3-219ENST00000608621 KLHDC8BQ8IXV7 354 aa12.97□□□□□ -0.33
POLR2J3-219ENST00000608621 SYTL1Q8IYJ3 562 aa12.97□□□□□ -0.33
POLR2J3-219ENST00000608621 ZBTB2Q8N680 514 aa12.97□□□□□ -0.33
POLR2J3-219ENST00000608621 FDCSPQ8NFU4 85 aa12.97□□□□□ -0.33
POLR2J3-219ENST00000608621 LRRC45Q96CN5 670 aa12.97□□□□□ -0.33
POLR2J3-219ENST00000608621 CDKN2AIPNLQ96HQ2 116 aa12.97□□□□□ -0.33
POLR2J3-219ENST00000608621 PPP1R2P1Q96PQ5 205 aa12.97□□□□□ -0.33
POLR2J3-219ENST00000608621 PITPNM3Q9BZ71 974 aa12.97□□□□□ -0.33
POLR2J3-219ENST00000608621 NLE1Q9NVX2 485 aaPredicted RBP12.97□□□□□ -0.33
POLR2J3-219ENST00000608621 FEZ2Q9UHY8 353 aaPredicted RBP12.97□□□□□ -0.33
POLR2J3-219ENST00000608621 MAP4K5Q9Y4K4 846 aa12.97□□□□□ -0.33
POLR2J3-219ENST00000608621 PCDHGB7Q9Y5F8 929 aa12.97□□□□□ -0.33
POLR2J3-219ENST00000608621 E7EQ34 232 aa12.96□□□□□ -0.33
POLR2J3-219ENST00000608621 H7C0S8 307 aa12.96□□□□□ -0.33
POLR2J3-219ENST00000608621 DPM1O60762 260 aa12.96□□□□□ -0.33
POLR2J3-219ENST00000608621 SORBS2O94875 1100 aaKnown RBP12.96□□□□□ -0.33
POLR2J3-219ENST00000608621 INPP5JQ15735 1006 aaPredicted RBP12.96□□□□□ -0.33
POLR2J3-219ENST00000608621 PARP6Q2NL67 630 aa12.96□□□□□ -0.33
POLR2J3-219ENST00000608621 FHL5Q5TD97 284 aa12.96□□□□□ -0.33
POLR2J3-219ENST00000608621 KCTD11Q693B1 232 aa12.96□□□□□ -0.33
POLR2J3-219ENST00000608621 FAM198BQ6UWH4 519 aa12.96□□□□□ -0.33
POLR2J3-219ENST00000608621 MED25Q71SY5 747 aa12.96□□□□□ -0.33
POLR2J3-219ENST00000608621 PIANPQ8IYJ0 282 aa12.96□□□□□ -0.33
POLR2J3-219ENST00000608621 TMEM102Q8N9M5 508 aaPredicted RBP12.96□□□□□ -0.33
POLR2J3-219ENST00000608621 ALG3Q92685 438 aa12.96□□□□□ -0.33
POLR2J3-219ENST00000608621 CALR3Q96L12 384 aaKnown RBP12.96□□□□□ -0.33
POLR2J3-219ENST00000608621 HGH1Q9BTY7 390 aa12.96□□□□□ -0.33
POLR2J3-219ENST00000608621 NUDT9Q9BW91 350 aa12.96□□□□□ -0.33
POLR2J3-219ENST00000608621 MFRPQ9BY79 579 aa12.96□□□□□ -0.33
POLR2J3-219ENST00000608621 VPS37BQ9H9H4 285 aa12.96□□□□□ -0.33
POLR2J3-219ENST00000608621 FAM60AQ9NP50 221 aa12.96□□□□□ -0.33
POLR2J3-219ENST00000608621 ACTR10Q9NZ32 417 aa12.96□□□□□ -0.33
POLR2J3-219ENST00000608621 SMARCAL1Q9NZC9 954 aa12.96□□□□□ -0.33
POLR2J3-219ENST00000608621 PIKFYVEQ9Y2I7 2098 aa12.96□□□□□ -0.33
POLR2J3-219ENST00000608621 ESPL1Q14674 2120 aa12.95□□□□□ -0.34
POLR2J3-219ENST00000608621 ICE1Q9Y2F5 2266 aa12.95□□□□□ -0.34
POLR2J3-219ENST00000608621 CCDC88CQ9P219 2028 aa12.95□□□□□ -0.34
POLR2J3-219ENST00000608621 SOWAHDA6NJG2 315 aa12.95□□□□□ -0.34
POLR2J3-219ENST00000608621 AGFG2O95081 481 aa12.95□□□□□ -0.34
POLR2J3-219ENST00000608621 METTL18O95568 372 aa12.95□□□□□ -0.34
POLR2J3-219ENST00000608621 HBQ1P09105 142 aa12.95□□□□□ -0.34
POLR2J3-219ENST00000608621 CBSLP0DN79 551 aa12.95□□□□□ -0.34
POLR2J3-219ENST00000608621 AGXTP21549 392 aa12.95□□□□□ -0.34
POLR2J3-219ENST00000608621 CBSP35520 551 aa12.95□□□□□ -0.34
POLR2J3-219ENST00000608621 CACNG1Q06432 222 aa12.95□□□□□ -0.34
POLR2J3-219ENST00000608621 POU6F1Q14863 301 aa12.95□□□□□ -0.34
POLR2J3-219ENST00000608621 BRD3Q15059 726 aa12.95□□□□□ -0.34
POLR2J3-219ENST00000608621 DBN1Q16643 649 aa12.95□□□□□ -0.34
POLR2J3-219ENST00000608621 C4orf17Q53FE4 359 aa12.95□□□□□ -0.34
POLR2J3-219ENST00000608621 MLIPQ5VWP3 458 aa12.95□□□□□ -0.34
POLR2J3-219ENST00000608621 ZNF385CQ66K41 422 aaPredicted RBP12.95□□□□□ -0.34
POLR2J3-219ENST00000608621 JMJD6Q6NYC1 403 aaPredicted RBP12.95□□□□□ -0.34
POLR2J3-219ENST00000608621 SPESP1Q6UW49 350 aa12.95□□□□□ -0.34
POLR2J3-219ENST00000608621 UNC5AQ6ZN44 842 aa12.95□□□□□ -0.34
POLR2J3-219ENST00000608621 ARHGEF18Q6ZSZ5 1173 aa12.95□□□□□ -0.34
POLR2J3-219ENST00000608621 HOOK3Q86VS8 718 aa12.95□□□□□ -0.34
POLR2J3-219ENST00000608621 GPR135Q8IZ08 494 aa12.95□□□□□ -0.34
POLR2J3-219ENST00000608621 FAM71DQ8N9W8 422 aa12.95□□□□□ -0.34
POLR2J3-219ENST00000608621 GLIS1Q8NBF1 620 aa12.95□□□□□ -0.34
POLR2J3-219ENST00000608621 OR5AR1Q8NGP9 310 aa12.95□□□□□ -0.34
POLR2J3-219ENST00000608621 STYXQ8WUJ0 223 aa12.95□□□□□ -0.34
POLR2J3-219ENST00000608621 N4BP2L2Q92802 583 aaPredicted RBP12.95□□□□□ -0.34
POLR2J3-219ENST00000608621 DPH2Q9BQC3 489 aaPredicted RBP12.95□□□□□ -0.34
POLR2J3-219ENST00000608621 SPRTNQ9H040 489 aaPredicted RBP12.95□□□□□ -0.34
POLR2J3-219ENST00000608621 SLAMF7Q9NQ25 335 aa12.95□□□□□ -0.34
POLR2J3-219ENST00000608621 LUZP4Q9P127 313 aa12.95□□□□□ -0.34
POLR2J3-219ENST00000608621 G3BP2Q9UN86 482 aaKnown RBP12.95□□□□□ -0.34
POLR2J3-219ENST00000608621 ICKQ9UPZ9 632 aa12.95□□□□□ -0.34
POLR2J3-219ENST00000608621 PRSS21Q9Y6M0 314 aa12.95□□□□□ -0.34
POLR2J3-219ENST00000608621 SPTAN1Q13813 2472 aaKnown RBP12.95□□□□□ -0.34
POLR2J3-219ENST00000608621 SHANK1Q9Y566 2161 aa12.94□□□□□ -0.34
POLR2J3-219ENST00000608621 CCDC78A2IDD5 438 aa12.94□□□□□ -0.34
POLR2J3-219ENST00000608621 C9J4A7 227 aa12.94□□□□□ -0.34
POLR2J3-219ENST00000608621 LIN7AO14910 233 aaPredicted RBP12.94□□□□□ -0.34
POLR2J3-219ENST00000608621 HCRTR1O43613 425 aa12.94□□□□□ -0.34
POLR2J3-219ENST00000608621 AP2A2O94973 939 aa12.94□□□□□ -0.34
POLR2J3-219ENST00000608621 GSTM1P09488 218 aa12.94□□□□□ -0.34
POLR2J3-219ENST00000608621 TPBGLP0DKB5 382 aa12.94□□□□□ -0.34
POLR2J3-219ENST00000608621 ATXN8OSP0DMR3 200 aa12.94□□□□□ -0.34
POLR2J3-219ENST00000608621 UGT2B7P16662 529 aa12.94□□□□□ -0.34
POLR2J3-219ENST00000608621 RRADP55042 308 aa12.94□□□□□ -0.34
POLR2J3-219ENST00000608621 GSTM4Q03013 218 aa12.94□□□□□ -0.34
POLR2J3-219ENST00000608621 ATP1A4Q13733 1029 aa12.94□□□□□ -0.34
POLR2J3-219ENST00000608621 NCF4Q15080 339 aa12.94□□□□□ -0.34
POLR2J3-219ENST00000608621 HIST2H2BCQ6DN03 193 aa12.94□□□□□ -0.34
POLR2J3-219ENST00000608621 NAPRTQ6XQN6 538 aa12.94□□□□□ -0.34
POLR2J3-219ENST00000608621 TRIM73Q86UV7 250 aa12.94□□□□□ -0.34
POLR2J3-219ENST00000608621 RBMXL3Q8N7X1 1067 aaKnown RBP12.94□□□□□ -0.34
POLR2J3-219ENST00000608621 Q8NA96 180 aa12.94□□□□□ -0.34
POLR2J3-219ENST00000608621 ELMO1Q92556 727 aa12.94□□□□□ -0.34
POLR2J3-219ENST00000608621 TBRG4Q969Z0 631 aaKnown RBP eCLIP12.94□□□□□ -0.34
POLR2J3-219ENST00000608621 TCTN2Q96GX1 697 aa12.94□□□□□ -0.34
POLR2J3-219ENST00000608621 SGSM3Q96HU1 749 aa12.94□□□□□ -0.34
POLR2J3-219ENST00000608621 ALS2CR12Q96Q35 445 aa12.94□□□□□ -0.34
POLR2J3-219ENST00000608621 OR2A14Q96R47 310 aa12.94□□□□□ -0.34
POLR2J3-219ENST00000608621 LACRTQ9GZZ8 138 aa12.94□□□□□ -0.34
POLR2J3-219ENST00000608621 LRRC40Q9H9A6 602 aa12.94□□□□□ -0.34
POLR2J3-219ENST00000608621 PIH1D1Q9NWS0 290 aaKnown RBP12.94□□□□□ -0.34
POLR2J3-219ENST00000608621 SPHK1Q9NYA1 384 aa12.94□□□□□ -0.34
POLR2J3-219ENST00000608621 GPR83Q9NYM4 423 aa12.94□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 53.5 ms