RNA–Protein interactions for RNA: ENST00000602723.5

CSMD1-217, Transcript of CUB and Sushi multiple domains 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CSMD1, Length 10,938 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD1-217ENST00000602723 MND1Q9BWT6 205 aa9.46□□□□□ -0.9
CSMD1-217ENST00000602723 CALML5Q9NZT1 146 aa9.46□□□□□ -0.9
CSMD1-217ENST00000602723 PSMD8P48556 350 aa9.46□□□□□ -0.9
CSMD1-217ENST00000602723 MTPNP58546 118 aa9.46□□□□□ -0.9
CSMD1-217ENST00000602723 GBE1Q04446 702 aa9.46□□□□□ -0.9
CSMD1-217ENST00000602723 ZNF517Q6ZMY9 492 aaPredicted RBP9.46□□□□□ -0.9
CSMD1-217ENST00000602723 ERI1Q8IV48 349 aaKnown RBP9.46□□□□□ -0.9
CSMD1-217ENST00000602723 C12orf43Q96C57 262 aaKnown RBP9.46□□□□□ -0.9
CSMD1-217ENST00000602723 NSMCE3Q96MG7 304 aa9.46□□□□□ -0.9
CSMD1-217ENST00000602723 MAFFQ9ULX9 164 aa9.46□□□□□ -0.9
CSMD1-217ENST00000602723 GRM6O15303 877 aa9.46□□□□□ -0.9
CSMD1-217ENST00000602723 TCEA1P23193 301 aaKnown RBP9.46□□□□□ -0.9
CSMD1-217ENST00000602723 PRKCDQ05655 676 aa9.46□□□□□ -0.9
CSMD1-217ENST00000602723 GXYLT1Q4G148 440 aa9.46□□□□□ -0.9
CSMD1-217ENST00000602723 LDB1Q86U70 411 aaPredicted RBP9.46□□□□□ -0.9
CSMD1-217ENST00000602723 EMID1Q96A84 441 aaPredicted RBP9.46□□□□□ -0.9
CSMD1-217ENST00000602723 C12orf65Q9H3J6 166 aaKnown RBP9.46□□□□□ -0.9
CSMD1-217ENST00000602723 POMPQ9Y244 141 aa9.46□□□□□ -0.9
CSMD1-217ENST00000602723 CPNE3O75131 537 aaKnown RBP9.46□□□□□ -0.9
CSMD1-217ENST00000602723 PRAMEF12O95522 483 aa9.46□□□□□ -0.9
CSMD1-217ENST00000602723 PKMP14618 531 aaKnown RBP9.46□□□□□ -0.9
CSMD1-217ENST00000602723 HTR7P34969 479 aa9.46□□□□□ -0.9
CSMD1-217ENST00000602723 HSPA7P48741 367 aa9.46□□□□□ -0.9
CSMD1-217ENST00000602723 LIMK2P53671 638 aa9.46□□□□□ -0.9
CSMD1-217ENST00000602723 ADAM15Q13444 863 aa9.46□□□□□ -0.9
CSMD1-217ENST00000602723 FAM124AQ86V42 546 aa9.46□□□□□ -0.9
CSMD1-217ENST00000602723 CPT1BQ92523 772 aa9.46□□□□□ -0.9
CSMD1-217ENST00000602723 COPS7AQ9UBW8 275 aa9.46□□□□□ -0.9
CSMD1-217ENST00000602723 RPL36Q9Y3U8 105 aaKnown RBP9.46□□□□□ -0.9
CSMD1-217ENST00000602723 MANSC4A6NHS7 340 aaPredicted RBP9.45□□□□□ -0.9
CSMD1-217ENST00000602723 WNT10BO00744 389 aa9.45□□□□□ -0.9
CSMD1-217ENST00000602723 SLC7A1P30825 629 aa9.45□□□□□ -0.9
CSMD1-217ENST00000602723 ADRA1BP35368 520 aa9.45□□□□□ -0.9
CSMD1-217ENST00000602723 MAN2A2P49641 1150 aa9.45□□□□□ -0.9
CSMD1-217ENST00000602723 MPP2Q14168 576 aa9.45□□□□□ -0.9
CSMD1-217ENST00000602723 GFOD2Q3B7J2 385 aa9.45□□□□□ -0.9
CSMD1-217ENST00000602723 FBXO43Q4G163 708 aa9.45□□□□□ -0.9
CSMD1-217ENST00000602723 PITRM1Q5JRX3 1037 aa9.45□□□□□ -0.9
CSMD1-217ENST00000602723 RBM48Q5RL73 367 aaKnown RBP9.45□□□□□ -0.9
CSMD1-217ENST00000602723 GHDCQ8N2G8 530 aa9.45□□□□□ -0.9
CSMD1-217ENST00000602723 PIP5K1BO14986 540 aa9.45□□□□□ -0.9
CSMD1-217ENST00000602723 PCCBP05166 539 aa9.45□□□□□ -0.9
CSMD1-217ENST00000602723 NT5EP21589 574 aa9.45□□□□□ -0.9
CSMD1-217ENST00000602723 RPIAP49247 311 aa9.45□□□□□ -0.9
CSMD1-217ENST00000602723 CD83Q01151 205 aa9.45□□□□□ -0.9
CSMD1-217ENST00000602723 APOBEC3HQ6NTF7 200 aaKnown RBP9.45□□□□□ -0.9
CSMD1-217ENST00000602723 ZNF782Q6ZMW2 699 aaPredicted RBP9.45□□□□□ -0.9
CSMD1-217ENST00000602723 DNAJB7Q7Z6W7 309 aaPredicted RBP9.45□□□□□ -0.9
CSMD1-217ENST00000602723 TBATAQ96M53 351 aa9.45□□□□□ -0.9
CSMD1-217ENST00000602723 KREMEN1Q96MU8 473 aa9.45□□□□□ -0.9
CSMD1-217ENST00000602723 TRPV4Q9HBA0 871 aa9.45□□□□□ -0.9
CSMD1-217ENST00000602723 TCRBV7S2A1N4TA0A589 114 aa9.45□□□□□ -0.9
CSMD1-217ENST00000602723 SPATA31C2B4DYI2 1134 aa9.45□□□□□ -0.9
CSMD1-217ENST00000602723 CLPXO76031 633 aa9.45□□□□□ -0.9
CSMD1-217ENST00000602723 PCSK2P16519 638 aa9.45□□□□□ -0.9
CSMD1-217ENST00000602723 CASP9P55211 416 aa9.45□□□□□ -0.9
CSMD1-217ENST00000602723 FAM156AQ8NDB6 213 aa9.45□□□□□ -0.9
CSMD1-217ENST00000602723 GAL3ST1Q99999 423 aa9.45□□□□□ -0.9
CSMD1-217ENST00000602723 HEPACAMQ14CZ8 416 aa9.45□□□□□ -0.9
CSMD1-217ENST00000602723 TMEM44Q2T9K0 475 aa9.45□□□□□ -0.9
CSMD1-217ENST00000602723 IFI44LQ53G44 452 aa9.45□□□□□ -0.9
CSMD1-217ENST00000602723 AGLP35573 1532 aa9.45□□□□□ -0.9
CSMD1-217ENST00000602723 TULP2O00295 520 aa9.45□□□□□ -0.9
CSMD1-217ENST00000602723 CCRL2O00421 344 aa9.45□□□□□ -0.9
CSMD1-217ENST00000602723 KAT7O95251 611 aa9.45□□□□□ -0.9
CSMD1-217ENST00000602723 ZNF20P17024 532 aa9.45□□□□□ -0.9
CSMD1-217ENST00000602723 TUBB3Q13509 450 aa9.45□□□□□ -0.9
CSMD1-217ENST00000602723 FBXO48Q5FWF7 155 aa9.45□□□□□ -0.9
CSMD1-217ENST00000602723 ADGRG6Q86SQ4 1221 aa9.45□□□□□ -0.9
CSMD1-217ENST00000602723 COX18Q8N8Q8 333 aa9.45□□□□□ -0.9
CSMD1-217ENST00000602723 TNFRSF25Q93038 417 aa9.45□□□□□ -0.9
CSMD1-217ENST00000602723 KCNC2Q96PR1 638 aa9.45□□□□□ -0.9
CSMD1-217ENST00000602723 TTPALQ9BTX7 342 aa9.45□□□□□ -0.9
CSMD1-217ENST00000602723 WRAP53Q9BUR4 548 aaKnown RBP9.45□□□□□ -0.9
CSMD1-217ENST00000602723 METTL8Q9H825 291 aaKnown RBP9.45□□□□□ -0.9
CSMD1-217ENST00000602723 GDAP2Q9NXN4 497 aa9.45□□□□□ -0.9
CSMD1-217ENST00000602723 FBXW2Q9UKT8 454 aa9.45□□□□□ -0.9
CSMD1-217ENST00000602723 SPATA31D1Q6ZQQ2 1576 aa9.45□□□□□ -0.9
CSMD1-217ENST00000602723 RLN2P04090 185 aa9.45□□□□□ -0.9
CSMD1-217ENST00000602723 SRCP12931 536 aa9.45□□□□□ -0.9
CSMD1-217ENST00000602723 EFNA1P20827 205 aaPredicted RBP9.45□□□□□ -0.9
CSMD1-217ENST00000602723 CAPSQ13938 189 aa9.45□□□□□ -0.9
CSMD1-217ENST00000602723 CDKL4Q5MAI5 379 aa9.45□□□□□ -0.9
CSMD1-217ENST00000602723 FOXR2Q6PJQ5 311 aa9.45□□□□□ -0.9
CSMD1-217ENST00000602723 CXCL17Q6UXB2 119 aa9.45□□□□□ -0.9
CSMD1-217ENST00000602723 KLHL36Q8N4N3 616 aa9.45□□□□□ -0.9
CSMD1-217ENST00000602723 BANPQ8N9N5 519 aa9.45□□□□□ -0.9
CSMD1-217ENST00000602723 PNLDC1Q8NA58 520 aaKnown RBP9.45□□□□□ -0.9
CSMD1-217ENST00000602723 PHC3Q8NDX5 983 aa9.45□□□□□ -0.9
CSMD1-217ENST00000602723 TMIEQ8NEW7 156 aa9.45□□□□□ -0.9
CSMD1-217ENST00000602723 HBEGFQ99075 208 aa9.45□□□□□ -0.9
CSMD1-217ENST00000602723 MTERF1Q99551 399 aaKnown RBP9.45□□□□□ -0.9
CSMD1-217ENST00000602723 LRRC3Q9BY71 257 aa9.45□□□□□ -0.9
CSMD1-217ENST00000602723 PXDNQ92626 1479 aa9.45□□□□□ -0.9
CSMD1-217ENST00000602723 CTNNB1P35222 781 aa9.45□□□□□ -0.9
CSMD1-217ENST00000602723 OR3A3P47888 321 aa9.45□□□□□ -0.9
CSMD1-217ENST00000602723 OR3A2P47893 321 aa9.45□□□□□ -0.9
CSMD1-217ENST00000602723 UGCGQ16739 394 aa9.45□□□□□ -0.9
CSMD1-217ENST00000602723 FAM76BQ5HYJ3 339 aa9.45□□□□□ -0.9
CSMD1-217ENST00000602723 C6orf183Q5T699 404 aa9.45□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms