RNA–Protein interactions for RNA: ENST00000602113.5

DDX49-213, Transcript of DEAD-box helicase 49, humanhuman

TSL 1 (best)

Gene DDX49, Length 1,691 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX49-213ENST00000602113 CCL4L1Q8NHW4 92 aa17.05■□□□□ 0.32
DDX49-213ENST00000602113 MCOLN3Q8TDD5 553 aa17.05■□□□□ 0.32
DDX49-213ENST00000602113 GAB3Q8WWW8 586 aa17.05■□□□□ 0.32
DDX49-213ENST00000602113 ESAMQ96AP7 390 aa17.05■□□□□ 0.32
DDX49-213ENST00000602113 RHBDF1Q96CC6 855 aa17.05■□□□□ 0.32
DDX49-213ENST00000602113 C7orf26Q96N11 449 aa17.05■□□□□ 0.32
DDX49-213ENST00000602113 FOPNLQ96NB1 174 aa17.05■□□□□ 0.32
DDX49-213ENST00000602113 TCEAL2Q9H3H9 227 aaPredicted RBP17.05■□□□□ 0.32
DDX49-213ENST00000602113 ARL15Q9NXU5 204 aa17.05■□□□□ 0.32
DDX49-213ENST00000602113 A0A0C4DFX4 3053 aa17.04■□□□□ 0.32
DDX49-213ENST00000602113 NPHS1O60500 1241 aa17.04■□□□□ 0.32
DDX49-213ENST00000602113 RASGRP1O95267 797 aa17.04■□□□□ 0.32
DDX49-213ENST00000602113 C1orf105O95561 183 aa17.04■□□□□ 0.32
DDX49-213ENST00000602113 CATP04040 527 aaKnown RBP17.04■□□□□ 0.32
DDX49-213ENST00000602113 MAPK9P45984 424 aa17.04■□□□□ 0.32
DDX49-213ENST00000602113 CDKL1Q00532 357 aa17.04■□□□□ 0.32
DDX49-213ENST00000602113 OVGP1Q12889 678 aa17.04■□□□□ 0.32
DDX49-213ENST00000602113 ZXDCQ2QGD7 858 aaPredicted RBP17.04■□□□□ 0.32
DDX49-213ENST00000602113 ZNF542PQ5EBM4 170 aa17.04■□□□□ 0.32
DDX49-213ENST00000602113 ARL13AQ5H913 290 aaPredicted RBP17.04■□□□□ 0.32
DDX49-213ENST00000602113 CFAP157Q5JU67 520 aa17.04■□□□□ 0.32
DDX49-213ENST00000602113 CDKL4Q5MAI5 379 aa17.04■□□□□ 0.32
DDX49-213ENST00000602113 SULT1C3Q6IMI6 304 aa17.04■□□□□ 0.32
DDX49-213ENST00000602113 CAPRIN2Q6IMN6 1127 aaKnown RBP17.04■□□□□ 0.32
DDX49-213ENST00000602113 FRMD7Q6ZUT3 714 aa17.04■□□□□ 0.32
DDX49-213ENST00000602113 IQCHQ86VS3 1027 aa17.04■□□□□ 0.32
DDX49-213ENST00000602113 SPATS2Q86XZ4 545 aaKnown RBP17.04■□□□□ 0.32
DDX49-213ENST00000602113 DCP2Q8IU60 420 aaKnown RBP17.04■□□□□ 0.32
DDX49-213ENST00000602113 NSUN5Q96P11 429 aaKnown RBP17.04■□□□□ 0.32
DDX49-213ENST00000602113 EGFL8Q99944 293 aa17.04■□□□□ 0.32
DDX49-213ENST00000602113 TMEM79Q9BSE2 394 aa17.04■□□□□ 0.32
DDX49-213ENST00000602113 C1QTNF3Q9BXJ4 246 aa17.04■□□□□ 0.32
DDX49-213ENST00000602113 TRIM54Q9BYV2 358 aa17.04■□□□□ 0.32
DDX49-213ENST00000602113 FBXO4Q9UKT5 387 aa17.04■□□□□ 0.32
DDX49-213ENST00000602113 GON4LQ3T8J9 2241 aa17.04■□□□□ 0.32
DDX49-213ENST00000602113 LRP4O75096 1905 aa17.04■□□□□ 0.32
DDX49-213ENST00000602113 TLR4O00206 839 aa17.04■□□□□ 0.32
DDX49-213ENST00000602113 HRO43593 1189 aa17.04■□□□□ 0.32
DDX49-213ENST00000602113 SUPT7LO94864 414 aa17.04■□□□□ 0.32
DDX49-213ENST00000602113 FAM107AO95990 144 aa17.04■□□□□ 0.32
DDX49-213ENST00000602113 RPS17P08708 135 aaKnown RBP17.04■□□□□ 0.32
DDX49-213ENST00000602113 SLC35G4P0C7Q5 338 aa17.04■□□□□ 0.32
DDX49-213ENST00000602113 IDSP22304 550 aa17.04■□□□□ 0.32
DDX49-213ENST00000602113 AK4P27144 223 aaPredicted RBP17.04■□□□□ 0.32
DDX49-213ENST00000602113 GABPB1Q06547 395 aaPredicted RBP17.04■□□□□ 0.32
DDX49-213ENST00000602113 LRP8Q14114 963 aa17.04■□□□□ 0.32
DDX49-213ENST00000602113 WDR45BQ5MNZ6 344 aa17.04■□□□□ 0.32
DDX49-213ENST00000602113 UNC5DQ6UXZ4 953 aa17.04■□□□□ 0.32
DDX49-213ENST00000602113 CPLX4Q7Z7G2 160 aa17.04■□□□□ 0.32
DDX49-213ENST00000602113 NRROSQ86YC3 692 aa17.04■□□□□ 0.32
DDX49-213ENST00000602113 RGL4Q8IZJ4 473 aa17.04■□□□□ 0.32
DDX49-213ENST00000602113 FBXO15Q8NCQ5 510 aaPredicted RBP17.04■□□□□ 0.32
DDX49-213ENST00000602113 PHC3Q8NDX5 983 aa17.04■□□□□ 0.32
DDX49-213ENST00000602113 CNDP1Q96KN2 507 aa17.04■□□□□ 0.32
DDX49-213ENST00000602113 PRDM8Q9NQV8 689 aa17.04■□□□□ 0.32
DDX49-213ENST00000602113 TRNAU1APQ9NX07 287 aaKnown RBP17.04■□□□□ 0.32
DDX49-213ENST00000602113 CIDEBQ9UHD4 219 aa17.04■□□□□ 0.32
DDX49-213ENST00000602113 RRP9O43818 475 aaKnown RBP17.03■□□□□ 0.32
DDX49-213ENST00000602113 HSPA4LO95757 839 aa17.03■□□□□ 0.32
DDX49-213ENST00000602113 TNFP01375 233 aa17.03■□□□□ 0.32
DDX49-213ENST00000602113 ANXA5P08758 320 aa17.03■□□□□ 0.32
DDX49-213ENST00000602113 HIST1H2AGP0C0S8 130 aaPredicted RBP17.03■□□□□ 0.32
DDX49-213ENST00000602113 TSPAN8P19075 237 aa17.03■□□□□ 0.32
DDX49-213ENST00000602113 HIST1H2ADP20671 130 aa17.03■□□□□ 0.32
DDX49-213ENST00000602113 ITPKAP23677 461 aa17.03■□□□□ 0.32
DDX49-213ENST00000602113 MAP4P27816 1152 aaKnown RBP17.03■□□□□ 0.32
DDX49-213ENST00000602113 CDH13P55290 713 aa17.03■□□□□ 0.32
DDX49-213ENST00000602113 AP1S2P56377 157 aa17.03■□□□□ 0.32
DDX49-213ENST00000602113 SF3A3Q12874 501 aaKnown RBP eCLIP17.03■□□□□ 0.32
DDX49-213ENST00000602113 PCBP2Q15366 365 aaKnown RBP eCLIP17.03■□□□□ 0.32
DDX49-213ENST00000602113 PMS2CLQ68D20 193 aa17.03■□□□□ 0.32
DDX49-213ENST00000602113 PARGQ86W56 976 aa17.03■□□□□ 0.32
DDX49-213ENST00000602113 ZNF483Q8TF39 744 aaPredicted RBP17.03■□□□□ 0.32
DDX49-213ENST00000602113 UBTD2Q8WUN7 234 aa17.03■□□□□ 0.32
DDX49-213ENST00000602113 TFGQ92734 400 aaPredicted RBP17.03■□□□□ 0.32
DDX49-213ENST00000602113 NELL1Q92832 810 aa17.03■□□□□ 0.32
DDX49-213ENST00000602113 HIST1H2AHQ96KK5 128 aa17.03■□□□□ 0.32
DDX49-213ENST00000602113 INSM2Q96T92 566 aaPredicted RBP17.03■□□□□ 0.32
DDX49-213ENST00000602113 PKP4Q99569 1192 aa17.03■□□□□ 0.32
DDX49-213ENST00000602113 HIST1H2AJQ99878 128 aa17.03■□□□□ 0.32
DDX49-213ENST00000602113 H2AFJQ9BTM1 129 aa17.03■□□□□ 0.32
DDX49-213ENST00000602113 SHCBP1LQ9BZQ2 653 aa17.03■□□□□ 0.32
DDX49-213ENST00000602113 TBC1D29Q9UFV1 150 aa17.03■□□□□ 0.32
DDX49-213ENST00000602113 PCTPQ9UKL6 214 aa17.03■□□□□ 0.32
DDX49-213ENST00000602113 CFAP20Q9Y6A4 193 aaKnown RBP17.03■□□□□ 0.32
DDX49-213ENST00000602113 CEP192Q8TEP8 1941 aa17.03■□□□□ 0.32
DDX49-213ENST00000602113 UBFD1O14562 309 aaKnown RBP17.02■□□□□ 0.32
DDX49-213ENST00000602113 EML2O95834 649 aa17.02■□□□□ 0.32
DDX49-213ENST00000602113 AVPR2P30518 371 aa17.02■□□□□ 0.32
DDX49-213ENST00000602113 SERPINB5P36952 375 aa17.02■□□□□ 0.32
DDX49-213ENST00000602113 GDF5P43026 501 aa17.02■□□□□ 0.32
DDX49-213ENST00000602113 HSPA7P48741 367 aa17.02■□□□□ 0.32
DDX49-213ENST00000602113 CLCA4Q14CN2 919 aa17.02■□□□□ 0.32
DDX49-213ENST00000602113 ANKS6Q68DC2 871 aa17.02■□□□□ 0.32
DDX49-213ENST00000602113 PHACTR4Q8IZ21 702 aa17.02■□□□□ 0.32
DDX49-213ENST00000602113 OR5AR1Q8NGP9 310 aa17.02■□□□□ 0.32
DDX49-213ENST00000602113 BCAS4Q8TDM0 211 aa17.02■□□□□ 0.32
DDX49-213ENST00000602113 FBXL8Q96CD0 374 aa17.02■□□□□ 0.32
DDX49-213ENST00000602113 THOC1Q96FV9 657 aaKnown RBP17.02■□□□□ 0.32
DDX49-213ENST00000602113 ELAC2Q9BQ52 826 aaKnown RBP17.02■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms