RNA–Protein interactions for RNA: ENST00000600948.5

PLD3-223, Transcript of phospholipase D family member 3, human

TSL 2

Gene PLD3, Length 536 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PLD3-223	ENST00000600948	TRIT1	Q9H3H1	467 aa	Known RBP	15.03	■□□□□ -0
PLD3-223	ENST00000600948	XAB2	Q9HCS7	855 aa	Known RBP	15.03	■□□□□ -0
PLD3-223	ENST00000600948	ICK	Q9UPZ9	632 aa		15.03	■□□□□ -0
PLD3-223	ENST00000600948	BTRC	Q9Y297	605 aa		15.03	■□□□□ -0
PLD3-223	ENST00000600948	GSAP	A4D1B5	854 aa		15.02	■□□□□ -0
PLD3-223	ENST00000600948	GOLGA8K	D6RF30	607 aa		15.02	■□□□□ -0
PLD3-223	ENST00000600948	GOLGA8T	H3BQL2	631 aa		15.02	■□□□□ -0
PLD3-223	ENST00000600948	GOLGA8M	H3BSY2	632 aa		15.02	■□□□□ -0
PLD3-223	ENST00000600948	NDUFS3	O75489	264 aa		15.02	■□□□□ -0
PLD3-223	ENST00000600948	SPAG6	O75602	509 aa		15.02	■□□□□ -0
PLD3-223	ENST00000600948	KIAA0754	O94854	1291 aa		15.02	■□□□□ -0
PLD3-223	ENST00000600948	TIAF1	O95411	115 aa		15.02	■□□□□ -0
PLD3-223	ENST00000600948	TPBGL	P0DKB5	382 aa		15.02	■□□□□ -0
PLD3-223	ENST00000600948	ARL4D	P49703	201 aa		15.02	■□□□□ -0
PLD3-223	ENST00000600948	GNG11	P61952	73 aa		15.02	■□□□□ -0
PLD3-223	ENST00000600948	ACY1	Q03154	408 aa		15.02	■□□□□ -0
PLD3-223	ENST00000600948	ABHD18	Q0P651	414 aa		15.02	■□□□□ -0
PLD3-223	ENST00000600948	HSPA14	Q0VDF9	509 aa		15.02	■□□□□ -0
PLD3-223	ENST00000600948	TYSND1	Q2T9J0	566 aa		15.02	■□□□□ -0
PLD3-223	ENST00000600948	PAPD7	Q5XG87	772 aa	Known RBP	15.02	■□□□□ -0
PLD3-223	ENST00000600948	PTRHD1	Q6GMV3	140 aa	Known RBP	15.02	■□□□□ -0
PLD3-223	ENST00000600948	CASC4	Q6P4E1	433 aa		15.02	■□□□□ -0
PLD3-223	ENST00000600948	LRRC6	Q86X45	466 aa		15.02	■□□□□ -0
PLD3-223	ENST00000600948	RASGRP3	Q8IV61	690 aa		15.02	■□□□□ -0
PLD3-223	ENST00000600948	AGGF1	Q8N302	714 aa	eCLIP	15.02	■□□□□ -0
PLD3-223	ENST00000600948	OTUD6B	Q8N6M0	293 aa		15.02	■□□□□ -0
PLD3-223	ENST00000600948	ZSCAN1	Q8NBB4	408 aa		15.02	■□□□□ -0
PLD3-223	ENST00000600948	OR5K2	Q8NHB8	316 aa		15.02	■□□□□ -0
PLD3-223	ENST00000600948	SLCO2A1	Q92959	643 aa		15.02	■□□□□ -0
PLD3-223	ENST00000600948	SLC12A9	Q9BXP2	914 aa		15.02	■□□□□ -0
PLD3-223	ENST00000600948	PITPNM3	Q9BZ71	974 aa		15.02	■□□□□ -0
PLD3-223	ENST00000600948	TWSG1	Q9GZX9	223 aa		15.02	■□□□□ -0
PLD3-223	ENST00000600948	DDX47	Q9H0S4	455 aa	Known RBP	15.02	■□□□□ -0
PLD3-223	ENST00000600948	PDE7B	Q9NP56	450 aa		15.02	■□□□□ -0
PLD3-223	ENST00000600948	C1GALT1	Q9NS00	363 aa		15.02	■□□□□ -0
PLD3-223	ENST00000600948	FGF21	Q9NSA1	209 aa		15.02	■□□□□ -0
PLD3-223	ENST00000600948	SAMD15	Q9P1V8	674 aa		15.02	■□□□□ -0
PLD3-223	ENST00000600948	POLG2	Q9UHN1	485 aa		15.02	■□□□□ -0
PLD3-223	ENST00000600948	GNPTG	Q9UJJ9	305 aa		15.02	■□□□□ -0
PLD3-223	ENST00000600948	RARRES3	Q9UL19	164 aa		15.02	■□□□□ -0
PLD3-223	ENST00000600948	COL6A6	A6NMZ7	2263 aa		15.02	□□□□□ -0.01
PLD3-223	ENST00000600948	PIEZO2	Q9H5I5	2752 aa		15.02	□□□□□ -0.01
PLD3-223	ENST00000600948	KALRN	O60229	2985 aa		15.01	□□□□□ -0.01
PLD3-223	ENST00000600948	SEC16A	O15027	2179 aa		15.01	□□□□□ -0.01
PLD3-223	ENST00000600948	FAM237B	A0A1B0GVD1	139 aa		15.01	□□□□□ -0.01
PLD3-223	ENST00000600948	SLC9B1P1	A6NJY1	282 aa		15.01	□□□□□ -0.01
PLD3-223	ENST00000600948	SDR42E2	A6NKP2	422 aa		15.01	□□□□□ -0.01
PLD3-223	ENST00000600948	PRB1	P04280	392 aa		15.01	□□□□□ -0.01
PLD3-223	ENST00000600948	APOA4	P06727	396 aa		15.01	□□□□□ -0.01
PLD3-223	ENST00000600948	PAM	P19021	973 aa		15.01	□□□□□ -0.01
PLD3-223	ENST00000600948	CDH3	P22223	829 aa		15.01	□□□□□ -0.01
PLD3-223	ENST00000600948	PRDX3	P30048	256 aa	Known RBP	15.01	□□□□□ -0.01
PLD3-223	ENST00000600948	SHMT2	P34897	504 aa		15.01	□□□□□ -0.01
PLD3-223	ENST00000600948	STAT5A	P42229	794 aa		15.01	□□□□□ -0.01
PLD3-223	ENST00000600948	ANKRD20A4	Q4UJ75	823 aa		15.01	□□□□□ -0.01
PLD3-223	ENST00000600948	TAF1B	Q53T94	588 aa	Predicted RBP	15.01	□□□□□ -0.01
PLD3-223	ENST00000600948	DNAJC21	Q5F1R6	531 aa	Known RBP	15.01	□□□□□ -0.01
PLD3-223	ENST00000600948	CTSL3P	Q5NE16	218 aa		15.01	□□□□□ -0.01
PLD3-223	ENST00000600948	RNASEH2B	Q5TBB1	312 aa	Known RBP	15.01	□□□□□ -0.01
PLD3-223	ENST00000600948	MRNIP	Q6NTE8	343 aa		15.01	□□□□□ -0.01
PLD3-223	ENST00000600948	PPIL6	Q8IXY8	311 aa		15.01	□□□□□ -0.01
PLD3-223	ENST00000600948	UNC5B	Q8IZJ1	945 aa		15.01	□□□□□ -0.01
PLD3-223	ENST00000600948	ESX1	Q8N693	406 aa		15.01	□□□□□ -0.01
PLD3-223	ENST00000600948	ASZ1	Q8WWH4	475 aa		15.01	□□□□□ -0.01
PLD3-223	ENST00000600948	LPGAT1	Q92604	370 aa		15.01	□□□□□ -0.01
PLD3-223	ENST00000600948	ZNF669	Q96BR6	464 aa	Predicted RBP	15.01	□□□□□ -0.01
PLD3-223	ENST00000600948	BIRC8	Q96P09	236 aa		15.01	□□□□□ -0.01
PLD3-223	ENST00000600948	FCRL4	Q96PJ5	515 aa		15.01	□□□□□ -0.01
PLD3-223	ENST00000600948	PANX3	Q96QZ0	392 aa		15.01	□□□□□ -0.01
PLD3-223	ENST00000600948	TCF12	Q99081	682 aa		15.01	□□□□□ -0.01
PLD3-223	ENST00000600948	GPN2	Q9H9Y4	310 aa	Predicted RBP	15.01	□□□□□ -0.01
PLD3-223	ENST00000600948	ACTR10	Q9NZ32	417 aa		15.01	□□□□□ -0.01
PLD3-223	ENST00000600948	PCYOX1	Q9UHG3	505 aa		15.01	□□□□□ -0.01
PLD3-223	ENST00000600948	TDRKH	Q9Y2W6	561 aa	Known RBP	15.01	□□□□□ -0.01
PLD3-223	ENST00000600948	ZCWPW2	A0A1B0GU75	182 aa		15	□□□□□ -0.01
PLD3-223	ENST00000600948	MAGEB16	A2A368	324 aa		15	□□□□□ -0.01
PLD3-223	ENST00000600948	EIF4E1B	A6NMX2	242 aa	Known RBP	15	□□□□□ -0.01
PLD3-223	ENST00000600948	C2orf74	A8MZ97	194 aa		15	□□□□□ -0.01
PLD3-223	ENST00000600948	C1QL1	O75973	258 aa		15	□□□□□ -0.01
PLD3-223	ENST00000600948	SLCO2B1	O94956	709 aa		15	□□□□□ -0.01
PLD3-223	ENST00000600948	ST6GAL1	P15907	406 aa		15	□□□□□ -0.01
PLD3-223	ENST00000600948	OGN	P20774	298 aa	Known RBP	15	□□□□□ -0.01
PLD3-223	ENST00000600948	PTGIR	P43119	386 aa		15	□□□□□ -0.01
PLD3-223	ENST00000600948	EIF3B	P55884	814 aa	Known RBP	15	□□□□□ -0.01
PLD3-223	ENST00000600948	TUBB4B	P68371	445 aa		15	□□□□□ -0.01
PLD3-223	ENST00000600948	CYP4F2	P78329	520 aa		15	□□□□□ -0.01
PLD3-223	ENST00000600948	PTK6	Q13882	451 aa		15	□□□□□ -0.01
PLD3-223	ENST00000600948	TUBB2A	Q13885	445 aa		15	□□□□□ -0.01
PLD3-223	ENST00000600948	DHX34	Q14147	1143 aa	Known RBP	15	□□□□□ -0.01
PLD3-223	ENST00000600948	TMED2	Q15363	201 aa		15	□□□□□ -0.01
PLD3-223	ENST00000600948	PPP1R7	Q15435	360 aa		15	□□□□□ -0.01
PLD3-223	ENST00000600948	GPR19	Q15760	415 aa		15	□□□□□ -0.01
PLD3-223	ENST00000600948	TMTC4	Q5T4D3	741 aa		15	□□□□□ -0.01
PLD3-223	ENST00000600948	RNF187	Q5TA31	235 aa	Predicted RBP	15	□□□□□ -0.01
PLD3-223	ENST00000600948	PWWP2B	Q6NUJ5	590 aa		15	□□□□□ -0.01
PLD3-223	ENST00000600948	NEPRO	Q6NW34	567 aa		15	□□□□□ -0.01
PLD3-223	ENST00000600948	C6orf15	Q6UXA7	325 aa	Predicted RBP	15	□□□□□ -0.01
PLD3-223	ENST00000600948	UNC5A	Q6ZN44	842 aa		15	□□□□□ -0.01
PLD3-223	ENST00000600948	SDCCAG8	Q86SQ7	713 aa	Predicted RBP	15	□□□□□ -0.01
PLD3-223	ENST00000600948	TMEM135	Q86UB9	458 aa		15	□□□□□ -0.01

Retrieved 100 of 20,778 RNA–protein pairs in 24 ms