RNA–Protein interactions for RNA: ENST00000600868.5

UPF1-211, Transcript of UPF1, RNA helicase and ATPase, humanhuman

TSL 3

Gene UPF1, Length 580 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF1-211ENST00000600868 AVL9Q8NBF6 648 aa14□□□□□ -0.17
UPF1-211ENST00000600868 FBXO15Q8NCQ5 510 aaPredicted RBP14□□□□□ -0.17
UPF1-211ENST00000600868 RHEBL1Q8TAI7 183 aa14□□□□□ -0.17
UPF1-211ENST00000600868 PTERQ96BW5 349 aa14□□□□□ -0.17
UPF1-211ENST00000600868 SLC12A9Q9BXP2 914 aa14□□□□□ -0.17
UPF1-211ENST00000600868 MVB12BQ9H7P6 319 aa14□□□□□ -0.17
UPF1-211ENST00000600868 MED4Q9NPJ6 270 aa14□□□□□ -0.17
UPF1-211ENST00000600868 ZNF358Q9NW07 568 aa14□□□□□ -0.17
UPF1-211ENST00000600868 ZNF624Q9P2J8 865 aaPredicted RBP14□□□□□ -0.17
UPF1-211ENST00000600868 GRID1Q9ULK0 1009 aa14□□□□□ -0.17
UPF1-211ENST00000600868 ASF1AQ9Y294 204 aa14□□□□□ -0.17
UPF1-211ENST00000600868 ARHGEF17Q96PE2 2063 aaPredicted RBP14□□□□□ -0.17
UPF1-211ENST00000600868 CABIN1Q9Y6J0 2220 aa13.99□□□□□ -0.17
UPF1-211ENST00000600868 NPEPPSL1A6NEC2 478 aa13.99□□□□□ -0.17
UPF1-211ENST00000600868 OR52A4PA6NMU1 304 aa13.99□□□□□ -0.17
UPF1-211ENST00000600868 B4DGG1 531 aa13.99□□□□□ -0.17
UPF1-211ENST00000600868 BTN3A1O00481 513 aa13.99□□□□□ -0.17
UPF1-211ENST00000600868 CDX4O14627 284 aaPredicted RBP13.99□□□□□ -0.17
UPF1-211ENST00000600868 TYROBPO43914 113 aa13.99□□□□□ -0.17
UPF1-211ENST00000600868 NOBOXO60393 691 aa13.99□□□□□ -0.17
UPF1-211ENST00000600868 CATP04040 527 aaKnown RBP13.99□□□□□ -0.17
UPF1-211ENST00000600868 ENO2P09104 434 aaPredicted RBP13.99□□□□□ -0.17
UPF1-211ENST00000600868 ALPPL2P10696 532 aa13.99□□□□□ -0.17
UPF1-211ENST00000600868 NDUFS1P28331 727 aa13.99□□□□□ -0.17
UPF1-211ENST00000600868 SLC19A1P41440 591 aa13.99□□□□□ -0.17
UPF1-211ENST00000600868 NHLH1Q02575 133 aa13.99□□□□□ -0.17
UPF1-211ENST00000600868 GPS2Q13227 327 aa13.99□□□□□ -0.17
UPF1-211ENST00000600868 SUZ12Q15022 739 aaKnown RBP13.99□□□□□ -0.17
UPF1-211ENST00000600868 OR4D1Q15615 310 aa13.99□□□□□ -0.17
UPF1-211ENST00000600868 TSNQ15631 228 aaKnown RBP13.99□□□□□ -0.17
UPF1-211ENST00000600868 C6orf132Q5T0Z8 1188 aa13.99□□□□□ -0.17
UPF1-211ENST00000600868 SBSNQ6UWP8 590 aa13.99□□□□□ -0.17
UPF1-211ENST00000600868 DBX2Q6ZNG2 339 aa13.99□□□□□ -0.17
UPF1-211ENST00000600868 PRR23CQ6ZRP0 262 aa13.99□□□□□ -0.17
UPF1-211ENST00000600868 CDHR3Q6ZTQ4 885 aa13.99□□□□□ -0.17
UPF1-211ENST00000600868 UBE2R2Q712K3 238 aaPredicted RBP13.99□□□□□ -0.17
UPF1-211ENST00000600868 DCUN1D3Q8IWE4 304 aa13.99□□□□□ -0.17
UPF1-211ENST00000600868 GPR156Q8NFN8 814 aa13.99□□□□□ -0.17
UPF1-211ENST00000600868 OR4C6Q8NH72 309 aa13.99□□□□□ -0.17
UPF1-211ENST00000600868 OR5K2Q8NHB8 316 aa13.99□□□□□ -0.17
UPF1-211ENST00000600868 CFAP61Q8NHU2 1237 aa13.99□□□□□ -0.17
UPF1-211ENST00000600868 STAG3L4Q8TBR4 150 aa13.99□□□□□ -0.17
UPF1-211ENST00000600868 MAGEC3Q8TD91 643 aa13.99□□□□□ -0.17
UPF1-211ENST00000600868 ZFPM2Q8WW38 1151 aa13.99□□□□□ -0.17
UPF1-211ENST00000600868 DLG3Q92796 817 aa13.99□□□□□ -0.17
UPF1-211ENST00000600868 CXorf40BQ96DE9 158 aa13.99□□□□□ -0.17
UPF1-211ENST00000600868 MRPL57Q9BQC6 102 aaKnown RBP13.99□□□□□ -0.17
UPF1-211ENST00000600868 UNKQ9C0B0 810 aaKnown RBP13.99□□□□□ -0.17
UPF1-211ENST00000600868 TRIT1Q9H3H1 467 aaKnown RBP13.99□□□□□ -0.17
UPF1-211ENST00000600868 ALG9Q9H6U8 611 aa13.99□□□□□ -0.17
UPF1-211ENST00000600868 RDH14Q9HBH5 336 aa13.99□□□□□ -0.17
UPF1-211ENST00000600868 PARVBQ9HBI1 364 aa13.99□□□□□ -0.17
UPF1-211ENST00000600868 PARD6AQ9NPB6 346 aa13.99□□□□□ -0.17
UPF1-211ENST00000600868 IMP3Q9NV31 184 aaKnown RBP13.99□□□□□ -0.17
UPF1-211ENST00000600868 TMEM216Q9P0N5 145 aa13.99□□□□□ -0.17
UPF1-211ENST00000600868 ADAMTS6Q9UKP5 1117 aa13.99□□□□□ -0.17
UPF1-211ENST00000600868 PLLPQ9Y342 182 aa13.99□□□□□ -0.17
UPF1-211ENST00000600868 CFAP20Q9Y6A4 193 aaKnown RBP13.99□□□□□ -0.17
UPF1-211ENST00000600868 COLEC10Q9Y6Z7 277 aa13.99□□□□□ -0.17
UPF1-211ENST00000600868 OTOGLQ3ZCN5 2332 aa13.99□□□□□ -0.17
UPF1-211ENST00000600868 DMDP11532 3685 aa13.99□□□□□ -0.17
UPF1-211ENST00000600868 LAMA1P25391 3075 aa13.98□□□□□ -0.17
UPF1-211ENST00000600868 ARHGEF33A8MVX0 844 aa13.98□□□□□ -0.17
UPF1-211ENST00000600868 FFAR2O15552 330 aa13.98□□□□□ -0.17
UPF1-211ENST00000600868 PRPF4O43172 522 aaKnown RBP eCLIP13.98□□□□□ -0.17
UPF1-211ENST00000600868 KERAO60938 352 aa13.98□□□□□ -0.17
UPF1-211ENST00000600868 SPAG7O75391 227 aa13.98□□□□□ -0.17
UPF1-211ENST00000600868 CYP2A7P20853 494 aa13.98□□□□□ -0.17
UPF1-211ENST00000600868 MAP4P27816 1152 aaKnown RBP13.98□□□□□ -0.17
UPF1-211ENST00000600868 FASLGP48023 281 aa13.98□□□□□ -0.17
UPF1-211ENST00000600868 GLRBP48167 497 aa13.98□□□□□ -0.17
UPF1-211ENST00000600868 SLC18A1P54219 525 aa13.98□□□□□ -0.17
UPF1-211ENST00000600868 UBE2IP63279 158 aaKnown RBP13.98□□□□□ -0.17
UPF1-211ENST00000600868 SLC14A1Q13336 389 aa13.98□□□□□ -0.17
UPF1-211ENST00000600868 PPP1R3AQ16821 1122 aa13.98□□□□□ -0.17
UPF1-211ENST00000600868 CCDC153Q494R4 210 aa13.98□□□□□ -0.17
UPF1-211ENST00000600868 HSP90B2PQ58FF3 399 aa13.98□□□□□ -0.17
UPF1-211ENST00000600868 TECRLQ5HYJ1 363 aa13.98□□□□□ -0.17
UPF1-211ENST00000600868 N4BP2L1Q5TBK1 243 aaPredicted RBP13.98□□□□□ -0.17
UPF1-211ENST00000600868 ZCCHC8Q6NZY4 707 aaKnown RBP13.98□□□□□ -0.17
UPF1-211ENST00000600868 TTC23LQ6PF05 361 aa13.98□□□□□ -0.17
UPF1-211ENST00000600868 SLC9B2Q86UD5 537 aa13.98□□□□□ -0.17
UPF1-211ENST00000600868 ARL14Q8N4G2 192 aa13.98□□□□□ -0.17
UPF1-211ENST00000600868 FAM181AQ8N9Y4 354 aa13.98□□□□□ -0.17
UPF1-211ENST00000600868 PHC3Q8NDX5 983 aa13.98□□□□□ -0.17
UPF1-211ENST00000600868 OR5AR1Q8NGP9 310 aa13.98□□□□□ -0.17
UPF1-211ENST00000600868 MAPK15Q8TD08 544 aa13.98□□□□□ -0.17
UPF1-211ENST00000600868 MCOLN3Q8TDD5 553 aa13.98□□□□□ -0.17
UPF1-211ENST00000600868 SLC37A2Q8TED4 501 aa13.98□□□□□ -0.17
UPF1-211ENST00000600868 PATE1Q8WXA2 126 aa13.98□□□□□ -0.17
UPF1-211ENST00000600868 SCYL1Q96KG9 808 aa13.98□□□□□ -0.17
UPF1-211ENST00000600868 FERD3LQ96RJ6 166 aa13.98□□□□□ -0.17
UPF1-211ENST00000600868 ATOH8Q96SQ7 321 aa13.98□□□□□ -0.17
UPF1-211ENST00000600868 EDEM2Q9BV94 578 aa13.98□□□□□ -0.17
UPF1-211ENST00000600868 TRIM54Q9BYV2 358 aa13.98□□□□□ -0.17
UPF1-211ENST00000600868 MRPL46Q9H2W6 279 aaKnown RBP13.98□□□□□ -0.17
UPF1-211ENST00000600868 TMEM9BQ9NQ34 198 aa13.98□□□□□ -0.17
UPF1-211ENST00000600868 POT1Q9NUX5 634 aa13.98□□□□□ -0.17
UPF1-211ENST00000600868 CPNE7Q9UBL6 633 aa13.98□□□□□ -0.17
UPF1-211ENST00000600868 POLG2Q9UHN1 485 aa13.98□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms