RNA–Protein interactions for RNA: ENST00000600310.5

UPF1-209, Transcript of UPF1, RNA helicase and ATPase, humanhuman

TSL 4

Gene UPF1, Length 750 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF1-209ENST00000600310 RP1P56715 2156 aa18.83■□□□□ 0.6
UPF1-209ENST00000600310 DUX1O43812 170 aa18.82■□□□□ 0.6
UPF1-209ENST00000600310 UBXN7O94888 489 aa18.82■□□□□ 0.6
UPF1-209ENST00000600310 CPNE6O95741 557 aa18.82■□□□□ 0.6
UPF1-209ENST00000600310 MT-CO3P00414 261 aa18.82■□□□□ 0.6
UPF1-209ENST00000600310 RPN2P04844 631 aa18.82■□□□□ 0.6
UPF1-209ENST00000600310 TUBBP07437 444 aa18.82■□□□□ 0.6
UPF1-209ENST00000600310 SAT1P21673 171 aa18.82■□□□□ 0.6
UPF1-209ENST00000600310 RGS4P49798 205 aa18.82■□□□□ 0.6
UPF1-209ENST00000600310 PRKG2Q13237 762 aa18.82■□□□□ 0.6
UPF1-209ENST00000600310 PLCL1Q15111 1095 aa18.82■□□□□ 0.6
UPF1-209ENST00000600310 LRRC8EQ6NSJ5 796 aa18.82■□□□□ 0.6
UPF1-209ENST00000600310 RBM44Q6ZP01 1051 aaKnown RBP18.82■□□□□ 0.6
UPF1-209ENST00000600310 USP53Q70EK8 1073 aa18.82■□□□□ 0.6
UPF1-209ENST00000600310 TMPRSS7Q7RTY8 843 aa18.82■□□□□ 0.6
UPF1-209ENST00000600310 GALNT15Q8N3T1 639 aa18.82■□□□□ 0.6
UPF1-209ENST00000600310 SLC44A1Q8WWI5 657 aa18.82■□□□□ 0.6
UPF1-209ENST00000600310 HGH1Q9BTY7 390 aa18.82■□□□□ 0.6
UPF1-209ENST00000600310 TFB2MQ9H5Q4 396 aaKnown RBP18.82■□□□□ 0.6
UPF1-209ENST00000600310 OGFRQ9NZT2 677 aa18.82■□□□□ 0.6
UPF1-209ENST00000600310 RAB21Q9UL25 225 aa18.82■□□□□ 0.6
UPF1-209ENST00000600310 ATXN7L1Q9ULK2 861 aaPredicted RBP18.82■□□□□ 0.6
UPF1-209ENST00000600310 NFS1Q9Y697 457 aa18.82■□□□□ 0.6
UPF1-209ENST00000600310 D6RAR5 112 aa18.81■□□□□ 0.6
UPF1-209ENST00000600310 C1orf105O95561 183 aa18.81■□□□□ 0.6
UPF1-209ENST00000600310 PROS1P07225 676 aa18.81■□□□□ 0.6
UPF1-209ENST00000600310 ITGA2BP08514 1039 aa18.81■□□□□ 0.6
UPF1-209ENST00000600310 TYRP1P17643 537 aa18.81■□□□□ 0.6
UPF1-209ENST00000600310 AMD1P17707 334 aa18.81■□□□□ 0.6
UPF1-209ENST00000600310 CSF2RBP32927 897 aa18.81■□□□□ 0.6
UPF1-209ENST00000600310 MAPK9P45984 424 aa18.81■□□□□ 0.6
UPF1-209ENST00000600310 PGGT1BP53609 377 aa18.81■□□□□ 0.6
UPF1-209ENST00000600310 SLC12A2P55011 1212 aa18.81■□□□□ 0.6
UPF1-209ENST00000600310 CLDN6P56747 220 aa18.81■□□□□ 0.6
UPF1-209ENST00000600310 CFHR1Q03591 330 aa18.81■□□□□ 0.6
UPF1-209ENST00000600310 SLC29A2Q14542 456 aa18.81■□□□□ 0.6
UPF1-209ENST00000600310 USP10Q14694 798 aaKnown RBP18.81■□□□□ 0.6
UPF1-209ENST00000600310 RASGRP3Q8IV61 690 aa18.81■□□□□ 0.6
UPF1-209ENST00000600310 DCUN1D3Q8IWE4 304 aa18.81■□□□□ 0.6
UPF1-209ENST00000600310 DCBLD1Q8N8Z6 715 aa18.81■□□□□ 0.6
UPF1-209ENST00000600310 OR52E1Q8NGJ3 308 aa18.81■□□□□ 0.6
UPF1-209ENST00000600310 AENQ8WTP8 325 aaKnown RBP18.81■□□□□ 0.6
UPF1-209ENST00000600310 JPH3Q8WXH2 748 aaPredicted RBP18.81■□□□□ 0.6
UPF1-209ENST00000600310 MRRFQ96E11 262 aaKnown RBP18.81■□□□□ 0.6
UPF1-209ENST00000600310 TSPAN17Q96FV3 270 aa18.81■□□□□ 0.6
UPF1-209ENST00000600310 DPYSL5Q9BPU6 564 aa18.81■□□□□ 0.6
UPF1-209ENST00000600310 RDH14Q9HBH5 336 aa18.81■□□□□ 0.6
UPF1-209ENST00000600310 POPDC3Q9HBV1 291 aa18.81■□□□□ 0.6
UPF1-209ENST00000600310 TSR3Q9UJK0 312 aaKnown RBP18.81■□□□□ 0.6
UPF1-209ENST00000600310 SLC39A10Q9ULF5 831 aa18.81■□□□□ 0.6
UPF1-209ENST00000600310 CLCA2Q9UQC9 943 aa18.81■□□□□ 0.6
UPF1-209ENST00000600310 RUVBL2Q9Y230 463 aaKnown RBP18.81■□□□□ 0.6
UPF1-209ENST00000600310 SPTBN2O15020 2390 aa18.8■□□□□ 0.6
UPF1-209ENST00000600310 FAM221BA6H8Z2 402 aa18.8■□□□□ 0.6
UPF1-209ENST00000600310 PSIP1O75475 530 aaKnown RBP18.8■□□□□ 0.6
UPF1-209ENST00000600310 TSPAN12O95859 305 aa18.8■□□□□ 0.6
UPF1-209ENST00000600310 INHBAP08476 426 aa18.8■□□□□ 0.6
UPF1-209ENST00000600310 ADRB1P08588 477 aa18.8■□□□□ 0.6
UPF1-209ENST00000600310 JUPP14923 745 aa18.8■□□□□ 0.6
UPF1-209ENST00000600310 ZNF37AP17032 561 aaPredicted RBP18.8■□□□□ 0.6
UPF1-209ENST00000600310 CCNFP41002 786 aa18.8■□□□□ 0.6
UPF1-209ENST00000600310 IL2P60568 153 aa18.8■□□□□ 0.6
UPF1-209ENST00000600310 FOXC1Q12948 553 aa18.8■□□□□ 0.6
UPF1-209ENST00000600310 NAA30Q147X3 362 aaPredicted RBP18.8■□□□□ 0.6
UPF1-209ENST00000600310 MAP9Q49MG5 647 aa18.8■□□□□ 0.6
UPF1-209ENST00000600310 EMBQ6PCB8 327 aa18.8■□□□□ 0.6
UPF1-209ENST00000600310 TTC23LQ6PF05 361 aa18.8■□□□□ 0.6
UPF1-209ENST00000600310 KLHL35Q6PF15 583 aa18.8■□□□□ 0.6
UPF1-209ENST00000600310 WDR74Q6RFH5 385 aaPredicted RBP18.8■□□□□ 0.6
UPF1-209ENST00000600310 TMEM207Q6UWW9 146 aa18.8■□□□□ 0.6
UPF1-209ENST00000600310 PIWIL4Q7Z3Z4 852 aaKnown RBP18.8■□□□□ 0.6
UPF1-209ENST00000600310 CEP97Q8IW35 865 aa18.8■□□□□ 0.6
UPF1-209ENST00000600310 OR4E2Q8NGC2 313 aa18.8■□□□□ 0.6
UPF1-209ENST00000600310 MAGEC3Q8TD91 643 aa18.8■□□□□ 0.6
UPF1-209ENST00000600310 EEF1AKMT1Q8WVE0 214 aa18.8■□□□□ 0.6
UPF1-209ENST00000600310 LCN9Q8WX39 176 aa18.8■□□□□ 0.6
UPF1-209ENST00000600310 ASB11Q8WXH4 323 aa18.8■□□□□ 0.6
UPF1-209ENST00000600310 LINGO1Q96FE5 620 aa18.8■□□□□ 0.6
UPF1-209ENST00000600310 PAFAH2Q99487 392 aa18.8■□□□□ 0.6
UPF1-209ENST00000600310 NUDT22Q9BRQ3 303 aa18.8■□□□□ 0.6
UPF1-209ENST00000600310 SYTL2Q9HCH5 934 aa18.8■□□□□ 0.6
UPF1-209ENST00000600310 TDRKHQ9Y2W6 561 aaKnown RBP18.8■□□□□ 0.6
UPF1-209ENST00000600310 EXOC1LA0A1B0GW35 172 aa18.79■□□□□ 0.6
UPF1-209ENST00000600310 HMX2A2RU54 273 aa18.79■□□□□ 0.6
UPF1-209ENST00000600310 POC1B-GALNT4F8VUJ3 575 aa18.79■□□□□ 0.6
UPF1-209ENST00000600310 GFYI3L273 518 aa18.79■□□□□ 0.6
UPF1-209ENST00000600310 HYAL3O43820 417 aaPredicted RBP18.79■□□□□ 0.6
UPF1-209ENST00000600310 KDM1AO60341 852 aa18.79■□□□□ 0.6
UPF1-209ENST00000600310 WISP3O95389 354 aaPredicted RBP18.79■□□□□ 0.6
UPF1-209ENST00000600310 TPBGLP0DKB5 382 aa18.79■□□□□ 0.6
UPF1-209ENST00000600310 HOXB3P14651 431 aaPredicted RBP18.79■□□□□ 0.6
UPF1-209ENST00000600310 STMN1P16949 149 aa18.79■□□□□ 0.6
UPF1-209ENST00000600310 MSH2P43246 934 aa18.79■□□□□ 0.6
UPF1-209ENST00000600310 PPM1FP49593 454 aaPredicted RBP18.79■□□□□ 0.6
UPF1-209ENST00000600310 ZFP36L1Q07352 338 aaKnown RBP18.79■□□□□ 0.6
UPF1-209ENST00000600310 ZKSCAN8Q15776 578 aaPredicted RBP18.79■□□□□ 0.6
UPF1-209ENST00000600310 UAP1Q16222 522 aaPredicted RBP18.79■□□□□ 0.6
UPF1-209ENST00000600310 ISXQ2M1V0 245 aa18.79■□□□□ 0.6
UPF1-209ENST00000600310 TMEM71Q6P5X7 295 aa18.79■□□□□ 0.6
UPF1-209ENST00000600310 TMPRSS9Q7Z410 1059 aa18.79■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms