RNA–Protein interactions for RNA: ENST00000599223.5

IRF3-223, Transcript of interferon regulatory factor 3, humanhuman

TSL 1 (best) BASIC

Gene IRF3, Length 1,055 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IRF3-223ENST00000599223 SEMA7AO75326 666 aa14.22□□□□□ -0.13
IRF3-223ENST00000599223 TMEM63AO94886 807 aa14.22□□□□□ -0.13
IRF3-223ENST00000599223 CRTAMO95727 393 aa14.22□□□□□ -0.13
IRF3-223ENST00000599223 TUBB4AP04350 444 aa14.22□□□□□ -0.13
IRF3-223ENST00000599223 KLK3P07288 261 aaPredicted RBP14.22□□□□□ -0.13
IRF3-223ENST00000599223 CTSBP07858 339 aa14.22□□□□□ -0.13
IRF3-223ENST00000599223 RAB40ALP0C0E4 278 aa14.22□□□□□ -0.13
IRF3-223ENST00000599223 MSL3P1P0C860 447 aa14.22□□□□□ -0.13
IRF3-223ENST00000599223 CYP2A7P20853 494 aa14.22□□□□□ -0.13
IRF3-223ENST00000599223 ACRV1P26436 265 aa14.22□□□□□ -0.13
IRF3-223ENST00000599223 PTPN7P35236 360 aa14.22□□□□□ -0.13
IRF3-223ENST00000599223 FOXL2P58012 376 aa14.22□□□□□ -0.13
IRF3-223ENST00000599223 ATP1A4Q13733 1029 aa14.22□□□□□ -0.13
IRF3-223ENST00000599223 KRT33BQ14525 404 aa14.22□□□□□ -0.13
IRF3-223ENST00000599223 NCF4Q15080 339 aa14.22□□□□□ -0.13
IRF3-223ENST00000599223 DEFB110Q30KQ9 67 aa14.22□□□□□ -0.13
IRF3-223ENST00000599223 SERPINA9Q86WD7 417 aa14.22□□□□□ -0.13
IRF3-223ENST00000599223 PIANPQ8IYJ0 282 aa14.22□□□□□ -0.13
IRF3-223ENST00000599223 ADGRF3Q8IZF5 1079 aa14.22□□□□□ -0.13
IRF3-223ENST00000599223 GALNT11Q8NCW6 608 aa14.22□□□□□ -0.13
IRF3-223ENST00000599223 TRAPPC9Q96Q05 1148 aa14.22□□□□□ -0.13
IRF3-223ENST00000599223 FERD3LQ96RJ6 166 aa14.22□□□□□ -0.13
IRF3-223ENST00000599223 FANCEQ9HB96 536 aa14.22□□□□□ -0.13
IRF3-223ENST00000599223 FAM60AQ9NP50 221 aa14.22□□□□□ -0.13
IRF3-223ENST00000599223 LUC7LQ9NQ29 371 aaKnown RBP14.22□□□□□ -0.13
IRF3-223ENST00000599223 PIH1D1Q9NWS0 290 aaKnown RBP14.22□□□□□ -0.13
IRF3-223ENST00000599223 ZDHHC3Q9NYG2 299 aa14.22□□□□□ -0.13
IRF3-223ENST00000599223 AAR2Q9Y312 384 aaKnown RBP14.22□□□□□ -0.13
IRF3-223ENST00000599223 SBDSQ9Y3A5 250 aaKnown RBP eCLIP14.22□□□□□ -0.13
IRF3-223ENST00000599223 REXO2Q9Y3B8 237 aaKnown RBP14.22□□□□□ -0.13
IRF3-223ENST00000599223 HEBP2Q9Y5Z4 205 aa14.22□□□□□ -0.13
IRF3-223ENST00000599223 DUSP10Q9Y6W6 482 aa14.22□□□□□ -0.13
IRF3-223ENST00000599223 DOPEY1Q5JWR5 2465 aa14.22□□□□□ -0.13
IRF3-223ENST00000599223 ANKRD12Q6UB98 2062 aa14.21□□□□□ -0.13
IRF3-223ENST00000599223 C17orf113A0A1B0GUU1 675 aa14.21□□□□□ -0.13
IRF3-223ENST00000599223 A6NL46 340 aa14.21□□□□□ -0.13
IRF3-223ENST00000599223 H3BMH7 237 aa14.21□□□□□ -0.13
IRF3-223ENST00000599223 MATN2O00339 956 aa14.21□□□□□ -0.13
IRF3-223ENST00000599223 ZNF185O15231 689 aa14.21□□□□□ -0.13
IRF3-223ENST00000599223 VPS4BO75351 444 aa14.21□□□□□ -0.13
IRF3-223ENST00000599223 PYGMP11217 842 aa14.21□□□□□ -0.13
IRF3-223ENST00000599223 RALBP11234 206 aa14.21□□□□□ -0.13
IRF3-223ENST00000599223 VAV2P52735 878 aa14.21□□□□□ -0.13
IRF3-223ENST00000599223 COPS2P61201 443 aa14.21□□□□□ -0.13
IRF3-223ENST00000599223 PRKG2Q13237 762 aa14.21□□□□□ -0.13
IRF3-223ENST00000599223 RAPSNQ13702 412 aa14.21□□□□□ -0.13
IRF3-223ENST00000599223 BOP1Q14137 746 aaKnown RBP14.21□□□□□ -0.13
IRF3-223ENST00000599223 SPA17Q15506 151 aa14.21□□□□□ -0.13
IRF3-223ENST00000599223 ZIC1Q15915 447 aa14.21□□□□□ -0.13
IRF3-223ENST00000599223 DBN1Q16643 649 aa14.21□□□□□ -0.13
IRF3-223ENST00000599223 KCTD11Q693B1 232 aa14.21□□□□□ -0.13
IRF3-223ENST00000599223 SLC6A19Q695T7 634 aa14.21□□□□□ -0.13
IRF3-223ENST00000599223 JMJD6Q6NYC1 403 aaPredicted RBP14.21□□□□□ -0.13
IRF3-223ENST00000599223 LURAP1LQ8IV03 231 aa14.21□□□□□ -0.13
IRF3-223ENST00000599223 TMEM139Q8IV31 216 aa14.21□□□□□ -0.13
IRF3-223ENST00000599223 EFCAB3Q8N7B9 438 aa14.21□□□□□ -0.13
IRF3-223ENST00000599223 RBMXL3Q8N7X1 1067 aaKnown RBP14.21□□□□□ -0.13
IRF3-223ENST00000599223 FLVCR1-AS1Q8TAF5 88 aa14.21□□□□□ -0.13
IRF3-223ENST00000599223 MFRPQ9BY79 579 aa14.21□□□□□ -0.13
IRF3-223ENST00000599223 TFB2MQ9H5Q4 396 aaKnown RBP14.21□□□□□ -0.13
IRF3-223ENST00000599223 ARNT2Q9HBZ2 717 aa14.21□□□□□ -0.13
IRF3-223ENST00000599223 ACTR10Q9NZ32 417 aa14.21□□□□□ -0.13
IRF3-223ENST00000599223 VPS4AQ9UN37 437 aa14.21□□□□□ -0.13
IRF3-223ENST00000599223 PCDHA3Q9Y5H8 950 aa14.21□□□□□ -0.13
IRF3-223ENST00000599223 PRSS21Q9Y6M0 314 aa14.21□□□□□ -0.13
IRF3-223ENST00000599223 CCDC78A2IDD5 438 aa14.2□□□□□ -0.14
IRF3-223ENST00000599223 SOWAHDA6NJG2 315 aa14.2□□□□□ -0.14
IRF3-223ENST00000599223 CFAP99D6REC4 459 aa14.2□□□□□ -0.14
IRF3-223ENST00000599223 ZNF749O43361 778 aa14.2□□□□□ -0.14
IRF3-223ENST00000599223 AGFG2O95081 481 aa14.2□□□□□ -0.14
IRF3-223ENST00000599223 METTL18O95568 372 aa14.2□□□□□ -0.14
IRF3-223ENST00000599223 TPBGLP0DKB5 382 aa14.2□□□□□ -0.14
IRF3-223ENST00000599223 TPH1P17752 444 aa14.2□□□□□ -0.14
IRF3-223ENST00000599223 HADHAP40939 763 aa14.2□□□□□ -0.14
IRF3-223ENST00000599223 GABRA4P48169 554 aa14.2□□□□□ -0.14
IRF3-223ENST00000599223 MRPL49Q13405 166 aaKnown RBP14.2□□□□□ -0.14
IRF3-223ENST00000599223 PRPSAP1Q14558 356 aa14.2□□□□□ -0.14
IRF3-223ENST00000599223 ZRANB3Q5FWF4 1079 aa14.2□□□□□ -0.14
IRF3-223ENST00000599223 DARS2Q6PI48 645 aaKnown RBP14.2□□□□□ -0.14
IRF3-223ENST00000599223 SPESP1Q6UW49 350 aa14.2□□□□□ -0.14
IRF3-223ENST00000599223 MRGPREQ86SM8 312 aa14.2□□□□□ -0.14
IRF3-223ENST00000599223 AMIGO1Q86WK6 493 aa14.2□□□□□ -0.14
IRF3-223ENST00000599223 OR5AR1Q8NGP9 310 aa14.2□□□□□ -0.14
IRF3-223ENST00000599223 LRRC4CQ9HCJ2 640 aa14.2□□□□□ -0.14
IRF3-223ENST00000599223 RRAGDQ9NQL2 400 aaPredicted RBP14.2□□□□□ -0.14
IRF3-223ENST00000599223 TRMT1Q9NXH9 659 aaKnown RBP14.2□□□□□ -0.14
IRF3-223ENST00000599223 SPHK1Q9NYA1 384 aa14.2□□□□□ -0.14
IRF3-223ENST00000599223 EFR3BQ9Y2G0 817 aa14.2□□□□□ -0.14
IRF3-223ENST00000599223 PPP2R2CQ9Y2T4 447 aa14.2□□□□□ -0.14
IRF3-223ENST00000599223 GRID2IPA4D2P6 1211 aa14.19□□□□□ -0.14
IRF3-223ENST00000599223 OR51F1A6NGY5 319 aa14.19□□□□□ -0.14
IRF3-223ENST00000599223 C2orf74A8MZ97 194 aa14.19□□□□□ -0.14
IRF3-223ENST00000599223 TCP11X1B4DZS4 312 aa14.19□□□□□ -0.14
IRF3-223ENST00000599223 E7EQ34 232 aa14.19□□□□□ -0.14
IRF3-223ENST00000599223 H7C0S8 307 aa14.19□□□□□ -0.14
IRF3-223ENST00000599223 MASP2O00187 686 aa14.19□□□□□ -0.14
IRF3-223ENST00000599223 IFRD1O00458 451 aaPredicted RBP14.19□□□□□ -0.14
IRF3-223ENST00000599223 CNOT3O75175 753 aaKnown RBP14.19□□□□□ -0.14
IRF3-223ENST00000599223 KLF7O75840 302 aaPredicted RBP14.19□□□□□ -0.14
IRF3-223ENST00000599223 ATXN8OSP0DMR3 200 aa14.19□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 41.6 ms