RNA–Protein interactions for RNA: ENST00000597304.5

ZNF558-205, Transcript of zinc finger protein 558, humanhuman

TSL 5

Gene ZNF558, Length 2,612 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF558-205ENST00000597304 GMPPBQ9Y5P6 360 aa12.36□□□□□ -0.43
ZNF558-205ENST00000597304 RGS13O14921 159 aa12.36□□□□□ -0.43
ZNF558-205ENST00000597304 RECQL5O94762 991 aaPredicted RBP12.36□□□□□ -0.43
ZNF558-205ENST00000597304 PTTG1O95997 202 aa12.36□□□□□ -0.43
ZNF558-205ENST00000597304 THP07101 528 aa12.36□□□□□ -0.43
ZNF558-205ENST00000597304 HOXB6P17509 224 aaKnown RBP12.36□□□□□ -0.43
ZNF558-205ENST00000597304 BMPR1AP36894 532 aa12.36□□□□□ -0.43
ZNF558-205ENST00000597304 TGFBR2P37173 567 aa12.36□□□□□ -0.43
ZNF558-205ENST00000597304 CLK3P49761 638 aaKnown RBP12.36□□□□□ -0.43
ZNF558-205ENST00000597304 SCNN1GP51170 649 aa12.36□□□□□ -0.43
ZNF558-205ENST00000597304 RPL38P63173 70 aaKnown RBP12.36□□□□□ -0.43
ZNF558-205ENST00000597304 CLPPQ16740 277 aaPredicted RBP12.36□□□□□ -0.43
ZNF558-205ENST00000597304 PTPRNQ16849 979 aa12.36□□□□□ -0.43
ZNF558-205ENST00000597304 DUSP28Q4G0W2 176 aa12.36□□□□□ -0.43
ZNF558-205ENST00000597304 FAM171BQ6P995 826 aa12.36□□□□□ -0.43
ZNF558-205ENST00000597304 GCNT7Q6ZNI0 430 aa12.36□□□□□ -0.43
ZNF558-205ENST00000597304 C1orf74Q96LT6 269 aa12.36□□□□□ -0.43
ZNF558-205ENST00000597304 SERPINB11Q96P15 392 aa12.36□□□□□ -0.43
ZNF558-205ENST00000597304 RHNO1Q9BSD3 238 aa12.36□□□□□ -0.43
ZNF558-205ENST00000597304 TMLHEQ9NVH6 421 aa12.36□□□□□ -0.43
ZNF558-205ENST00000597304 TMEM248Q9NWD8 314 aa12.36□□□□□ -0.43
ZNF558-205ENST00000597304 TRMT6Q9UJA5 497 aaKnown RBP12.36□□□□□ -0.43
ZNF558-205ENST00000597304 AP3M1Q9Y2T2 418 aa12.36□□□□□ -0.43
ZNF558-205ENST00000597304 MYO16Q9Y6X6 1858 aa12.36□□□□□ -0.43
ZNF558-205ENST00000597304 PATJQ8NI35 1801 aa12.36□□□□□ -0.43
ZNF558-205ENST00000597304 AGAP5A6NIR3 686 aa12.35□□□□□ -0.43
ZNF558-205ENST00000597304 MRPS14O60783 128 aaKnown RBP12.35□□□□□ -0.43
ZNF558-205ENST00000597304 ODC1P11926 461 aa12.35□□□□□ -0.43
ZNF558-205ENST00000597304 CASP3P42574 277 aa12.35□□□□□ -0.43
ZNF558-205ENST00000597304 TRPC1P48995 793 aa12.35□□□□□ -0.43
ZNF558-205ENST00000597304 TUBA1BP68363 451 aa12.35□□□□□ -0.43
ZNF558-205ENST00000597304 PTGR1Q14914 329 aa12.35□□□□□ -0.43
ZNF558-205ENST00000597304 ALFQ53S48 1182 aa12.35□□□□□ -0.43
ZNF558-205ENST00000597304 CPZQ66K79 652 aa12.35□□□□□ -0.43
ZNF558-205ENST00000597304 AFTPHQ6ULP2 937 aa12.35□□□□□ -0.43
ZNF558-205ENST00000597304 TUBA1AQ71U36 451 aa12.35□□□□□ -0.43
ZNF558-205ENST00000597304 CYP4Z1Q86W10 505 aa12.35□□□□□ -0.43
ZNF558-205ENST00000597304 MSRB3Q8IXL7 192 aa12.35□□□□□ -0.43
ZNF558-205ENST00000597304 CHPFQ8IZ52 775 aa12.35□□□□□ -0.43
ZNF558-205ENST00000597304 SIDT2Q8NBJ9 832 aaKnown RBP12.35□□□□□ -0.43
ZNF558-205ENST00000597304 PROX1Q92786 737 aa12.35□□□□□ -0.43
ZNF558-205ENST00000597304 CCDC97Q96F63 343 aaPredicted RBP12.35□□□□□ -0.43
ZNF558-205ENST00000597304 LINGO1Q96FE5 620 aa12.35□□□□□ -0.43
ZNF558-205ENST00000597304 PPP3R2Q96LZ3 170 aa12.35□□□□□ -0.43
ZNF558-205ENST00000597304 GAD1Q99259 594 aa12.35□□□□□ -0.43
ZNF558-205ENST00000597304 ACBD6Q9BR61 282 aa12.35□□□□□ -0.43
ZNF558-205ENST00000597304 C6orf62Q9GZU0 229 aaPredicted RBP12.35□□□□□ -0.43
ZNF558-205ENST00000597304 GABARAPL1Q9H0R8 117 aa12.35□□□□□ -0.43
ZNF558-205ENST00000597304 TP63Q9H3D4 680 aaPredicted RBP12.35□□□□□ -0.43
ZNF558-205ENST00000597304 ZBTB20Q9HC78 741 aaPredicted RBP12.35□□□□□ -0.43
ZNF558-205ENST00000597304 NEK6Q9HC98 313 aa12.35□□□□□ -0.43
ZNF558-205ENST00000597304 PRDM5Q9NQX1 630 aaPredicted RBP12.35□□□□□ -0.43
ZNF558-205ENST00000597304 VNN3Q9NY84 501 aa12.35□□□□□ -0.43
ZNF558-205ENST00000597304 SLC25A37Q9NYZ2 338 aa12.35□□□□□ -0.43
ZNF558-205ENST00000597304 OPTCQ9UBM4 332 aa12.35□□□□□ -0.43
ZNF558-205ENST00000597304 OR2A25A4D2G3 310 aa12.35□□□□□ -0.43
ZNF558-205ENST00000597304 CASTOR2A6NHX0 329 aa12.35□□□□□ -0.43
ZNF558-205ENST00000597304 FAM220BPB1ANY3 271 aa12.35□□□□□ -0.43
ZNF558-205ENST00000597304 AREL1O15033 823 aa12.35□□□□□ -0.43
ZNF558-205ENST00000597304 RAD51BO15315 384 aa12.35□□□□□ -0.43
ZNF558-205ENST00000597304 KRT75O95678 551 aa12.35□□□□□ -0.43
ZNF558-205ENST00000597304 TSPAN12O95859 305 aa12.35□□□□□ -0.43
ZNF558-205ENST00000597304 SNAI1O95863 264 aaPredicted RBP12.35□□□□□ -0.43
ZNF558-205ENST00000597304 S100BP04271 92 aaPredicted RBP12.35□□□□□ -0.43
ZNF558-205ENST00000597304 CNPP09543 421 aaKnown RBP12.35□□□□□ -0.43
ZNF558-205ENST00000597304 SLC2A4P14672 509 aa12.35□□□□□ -0.43
ZNF558-205ENST00000597304 IL1RNP18510 177 aa12.35□□□□□ -0.43
ZNF558-205ENST00000597304 ARHGDIAP52565 204 aa12.35□□□□□ -0.43
ZNF558-205ENST00000597304 IL2P60568 153 aa12.35□□□□□ -0.43
ZNF558-205ENST00000597304 TIGD5Q53EQ6 642 aa12.35□□□□□ -0.43
ZNF558-205ENST00000597304 RUNDC3AQ59EK9 446 aa12.35□□□□□ -0.43
ZNF558-205ENST00000597304 CES5AQ6NT32 575 aa12.35□□□□□ -0.43
ZNF558-205ENST00000597304 PHACTR4Q8IZ21 702 aa12.35□□□□□ -0.43
ZNF558-205ENST00000597304 OR4F6Q8NGB9 312 aa12.35□□□□□ -0.43
ZNF558-205ENST00000597304 EEF1AKMT1Q8WVE0 214 aa12.35□□□□□ -0.43
ZNF558-205ENST00000597304 PYURFQ96I23 114 aa12.35□□□□□ -0.43
ZNF558-205ENST00000597304 NLE1Q9NVX2 485 aaPredicted RBP12.35□□□□□ -0.43
ZNF558-205ENST00000597304 EIF3LQ9Y262 564 aaKnown RBP12.35□□□□□ -0.43
ZNF558-205ENST00000597304 METTL15A6NJ78 407 aa12.34□□□□□ -0.43
ZNF558-205ENST00000597304 ADM5C9JUS6 153 aa12.34□□□□□ -0.43
ZNF558-205ENST00000597304 EPOP01588 193 aa12.34□□□□□ -0.43
ZNF558-205ENST00000597304 LCKP06239 509 aa12.34□□□□□ -0.43
ZNF558-205ENST00000597304 PBX3P40426 434 aa12.34□□□□□ -0.43
ZNF558-205ENST00000597304 AFF1P51825 1210 aaKnown RBP12.34□□□□□ -0.43
ZNF558-205ENST00000597304 IL10RBQ08334 325 aa12.34□□□□□ -0.43
ZNF558-205ENST00000597304 GBX1Q14549 363 aa12.34□□□□□ -0.43
ZNF558-205ENST00000597304 ZNF235Q14590 738 aa12.34□□□□□ -0.43
ZNF558-205ENST00000597304 ABRAXAS2Q15018 415 aa12.34□□□□□ -0.43
ZNF558-205ENST00000597304 SMN1Q16637 294 aaKnown RBP12.34□□□□□ -0.43
ZNF558-205ENST00000597304 DESI1Q6ICB0 168 aa12.34□□□□□ -0.43
ZNF558-205ENST00000597304 SCD5Q86SK9 330 aa12.34□□□□□ -0.43
ZNF558-205ENST00000597304 METTL23Q86XA0 190 aa12.34□□□□□ -0.43
ZNF558-205ENST00000597304 ZDHHC21Q8IVQ6 265 aa12.34□□□□□ -0.43
ZNF558-205ENST00000597304 NETO1Q8TDF5 533 aa12.34□□□□□ -0.43
ZNF558-205ENST00000597304 POP5Q969H6 163 aaKnown RBP12.34□□□□□ -0.43
ZNF558-205ENST00000597304 ITPAQ9BY32 194 aa12.34□□□□□ -0.43
ZNF558-205ENST00000597304 DPY30Q9C005 99 aa12.34□□□□□ -0.43
ZNF558-205ENST00000597304 MN1Q10571 1320 aaPredicted RBP12.34□□□□□ -0.43
ZNF558-205ENST00000597304 PTPRDP23468 1912 aa12.34□□□□□ -0.43
ZNF558-205ENST00000597304 PABPN1LA6NDY0 278 aaKnown RBP12.34□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 39.3 ms