RNA–Protein interactions for RNA: ENST00000596842.5

UPF1-204, Transcript of UPF1, RNA helicase and ATPase, humanhuman

TSL 2

Gene UPF1, Length 3,825 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF1-204ENST00000596842 SLC6A4P31645 630 aa14.99□□□□□ -0.01
UPF1-204ENST00000596842 BCAP31P51572 246 aa14.99□□□□□ -0.01
UPF1-204ENST00000596842 CYP4F3Q08477 520 aa14.99□□□□□ -0.01
UPF1-204ENST00000596842 CTU2Q2VPK5 515 aaKnown RBP14.99□□□□□ -0.01
UPF1-204ENST00000596842 CTSL3PQ5NE16 218 aa14.99□□□□□ -0.01
UPF1-204ENST00000596842 ARMC12Q5T9G4 340 aa14.99□□□□□ -0.01
UPF1-204ENST00000596842 DLEU7Q6UYE1 221 aa14.99□□□□□ -0.01
UPF1-204ENST00000596842 FKBP9P1Q75LS8 142 aa14.99□□□□□ -0.01
UPF1-204ENST00000596842 Q8N9G6 341 aaPredicted RBP14.99□□□□□ -0.01
UPF1-204ENST00000596842 NODALQ96S42 347 aa14.99□□□□□ -0.01
UPF1-204ENST00000596842 AMBRA1Q9C0C7 1298 aa14.99□□□□□ -0.01
UPF1-204ENST00000596842 MTPAPQ9NVV4 582 aaKnown RBP eCLIP14.99□□□□□ -0.01
UPF1-204ENST00000596842 NLE1Q9NVX2 485 aaPredicted RBP14.99□□□□□ -0.01
UPF1-204ENST00000596842 EIF3LQ9Y262 564 aaKnown RBP14.99□□□□□ -0.01
UPF1-204ENST00000596842 ELOVL7A1L3X0 281 aa14.98□□□□□ -0.01
UPF1-204ENST00000596842 CXCR6O00574 342 aa14.98□□□□□ -0.01
UPF1-204ENST00000596842 BCAS1O75363 584 aaPredicted RBP14.98□□□□□ -0.01
UPF1-204ENST00000596842 NADKO95544 446 aaPredicted RBP14.98□□□□□ -0.01
UPF1-204ENST00000596842 HTR1BP28222 390 aa14.98□□□□□ -0.01
UPF1-204ENST00000596842 MZF1P28698 734 aaPredicted RBP14.98□□□□□ -0.01
UPF1-204ENST00000596842 ZFP36L2P47974 494 aaKnown RBP14.98□□□□□ -0.01
UPF1-204ENST00000596842 GSTM4Q03013 218 aa14.98□□□□□ -0.01
UPF1-204ENST00000596842 DDX39BQ13838 428 aaKnown RBP14.98□□□□□ -0.01
UPF1-204ENST00000596842 TRIP4Q15650 581 aaPredicted RBP14.98□□□□□ -0.01
UPF1-204ENST00000596842 EID3Q8N140 333 aa14.98□□□□□ -0.01
UPF1-204ENST00000596842 ABHD11Q8NFV4 315 aa14.98□□□□□ -0.01
UPF1-204ENST00000596842 OR7A2PQ8NGA2 310 aa14.98□□□□□ -0.01
UPF1-204ENST00000596842 SUN5Q8TC36 379 aa14.98□□□□□ -0.01
UPF1-204ENST00000596842 ZNF583Q96ND8 569 aa14.98□□□□□ -0.01
UPF1-204ENST00000596842 CRISPLD1Q9H336 500 aa14.98□□□□□ -0.01
UPF1-204ENST00000596842 ZNF490Q9ULM2 529 aaPredicted RBP14.98□□□□□ -0.01
UPF1-204ENST00000596842 RALGAPA2Q2PPJ7 1873 aa14.98□□□□□ -0.01
UPF1-204ENST00000596842 CYP11A1P05108 521 aa14.98□□□□□ -0.01
UPF1-204ENST00000596842 TTPAP49638 278 aa14.98□□□□□ -0.01
UPF1-204ENST00000596842 GATMP50440 423 aa14.98□□□□□ -0.01
UPF1-204ENST00000596842 FAM189BP81408 668 aa14.98□□□□□ -0.01
UPF1-204ENST00000596842 TRIM32Q13049 653 aa14.98□□□□□ -0.01
UPF1-204ENST00000596842 TJAP1Q5JTD0 557 aa14.98□□□□□ -0.01
UPF1-204ENST00000596842 RAB2BQ8WUD1 216 aa14.98□□□□□ -0.01
UPF1-204ENST00000596842 CLPBQ9H078 707 aa14.98□□□□□ -0.01
UPF1-204ENST00000596842 ZIM2Q9NZV7 527 aa14.98□□□□□ -0.01
UPF1-204ENST00000596842 FCF1Q9Y324 198 aaKnown RBP14.98□□□□□ -0.01
UPF1-204ENST00000596842 ZNF236Q9UL36 1845 aa14.98□□□□□ -0.01
UPF1-204ENST00000596842 FFAR2O15552 330 aa14.98□□□□□ -0.01
UPF1-204ENST00000596842 GJB5O95377 273 aa14.98□□□□□ -0.01
UPF1-204ENST00000596842 PFKLP17858 780 aa14.98□□□□□ -0.01
UPF1-204ENST00000596842 IDUAP35475 653 aa14.98□□□□□ -0.01
UPF1-204ENST00000596842 TGFBR1P36897 503 aa14.98□□□□□ -0.01
UPF1-204ENST00000596842 AQP6Q13520 282 aa14.98□□□□□ -0.01
UPF1-204ENST00000596842 RNF219Q5W0B1 726 aaPredicted RBP14.98□□□□□ -0.01
UPF1-204ENST00000596842 TMEM179BQ7Z7N9 219 aa14.98□□□□□ -0.01
UPF1-204ENST00000596842 PTRH1Q86Y79 214 aaKnown RBP14.98□□□□□ -0.01
UPF1-204ENST00000596842 CARNMT1Q8N4J0 409 aa14.98□□□□□ -0.01
UPF1-204ENST00000596842 PYCR2Q96C36 320 aa14.98□□□□□ -0.01
UPF1-204ENST00000596842 HERC2P3Q9BVR0 1158 aa14.98□□□□□ -0.01
UPF1-204ENST00000596842 ITGB1BP2Q9UKP3 347 aa14.98□□□□□ -0.01
UPF1-204ENST00000596842 HTTP42858 3142 aa14.98□□□□□ -0.01
UPF1-204ENST00000596842 MKI67P46013 3256 aaKnown RBP14.97□□□□□ -0.01
UPF1-204ENST00000596842 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP14.97□□□□□ -0.01
UPF1-204ENST00000596842 LOC100130705A0A1B0GUX0 176 aa14.97□□□□□ -0.01
UPF1-204ENST00000596842 AXIN1O15169 862 aa14.97□□□□□ -0.01
UPF1-204ENST00000596842 ULK1O75385 1050 aa14.97□□□□□ -0.01
UPF1-204ENST00000596842 ASGR1P07306 291 aa14.97□□□□□ -0.01
UPF1-204ENST00000596842 JAK1P23458 1154 aa14.97□□□□□ -0.01
UPF1-204ENST00000596842 CASP9P55211 416 aa14.97□□□□□ -0.01
UPF1-204ENST00000596842 ZNF177Q13360 481 aaPredicted RBP14.97□□□□□ -0.01
UPF1-204ENST00000596842 ANGPTL8Q6UXH0 198 aa14.97□□□□□ -0.01
UPF1-204ENST00000596842 PEX5LQ8IYB4 626 aa14.97□□□□□ -0.01
UPF1-204ENST00000596842 MCOLN3Q8TDD5 553 aa14.97□□□□□ -0.01
UPF1-204ENST00000596842 ELMO1Q92556 727 aa14.97□□□□□ -0.01
UPF1-204ENST00000596842 MIR1-1HGQ9H1L0 117 aa14.97□□□□□ -0.01
UPF1-204ENST00000596842 ACTL8Q9H568 366 aa14.97□□□□□ -0.01
UPF1-204ENST00000596842 H0Y858 1186 aa14.97□□□□□ -0.01
UPF1-204ENST00000596842 DLGAP3O95886 979 aa14.97□□□□□ -0.01
UPF1-204ENST00000596842 KRT8P05787 483 aa14.97□□□□□ -0.01
UPF1-204ENST00000596842 CCDC159P0C7I6 412 aa14.97□□□□□ -0.01
UPF1-204ENST00000596842 AQP1P29972 269 aa14.97□□□□□ -0.01
UPF1-204ENST00000596842 SGSHP51688 502 aa14.97□□□□□ -0.01
UPF1-204ENST00000596842 ZNF140P52738 457 aaPredicted RBP14.97□□□□□ -0.01
UPF1-204ENST00000596842 PWP1Q13610 501 aa14.97□□□□□ -0.01
UPF1-204ENST00000596842 SMN1Q16637 294 aaKnown RBP14.97□□□□□ -0.01
UPF1-204ENST00000596842 XAF1Q6GPH4 301 aa14.97□□□□□ -0.01
UPF1-204ENST00000596842 TXNDC11Q6PKC3 985 aa14.97□□□□□ -0.01
UPF1-204ENST00000596842 DHRS4L2Q6PKH6 230 aa14.97□□□□□ -0.01
UPF1-204ENST00000596842 TEX26Q8N6G2 289 aa14.97□□□□□ -0.01
UPF1-204ENST00000596842 CHDHQ8NE62 594 aaPredicted RBP14.97□□□□□ -0.01
UPF1-204ENST00000596842 BPIFB1Q8TDL5 484 aa14.97□□□□□ -0.01
UPF1-204ENST00000596842 RORBQ92753 470 aa14.97□□□□□ -0.01
UPF1-204ENST00000596842 DACT3Q96B18 629 aaPredicted RBP14.97□□□□□ -0.01
UPF1-204ENST00000596842 NUSAP1Q9BXS6 441 aaKnown RBP14.97□□□□□ -0.01
UPF1-204ENST00000596842 TLR9Q9NR96 1032 aa14.97□□□□□ -0.01
UPF1-204ENST00000596842 ANKRD66B4E2M5 251 aa14.97□□□□□ -0.01
UPF1-204ENST00000596842 SLC25A14O95258 325 aaPredicted RBP14.97□□□□□ -0.01
UPF1-204ENST00000596842 ANGPTL1O95841 491 aa14.97□□□□□ -0.01
UPF1-204ENST00000596842 HOXB8P17481 243 aaPredicted RBP14.97□□□□□ -0.01
UPF1-204ENST00000596842 XKR7Q5GH72 579 aa14.97□□□□□ -0.01
UPF1-204ENST00000596842 ARTNQ5T4W7 220 aa14.97□□□□□ -0.01
UPF1-204ENST00000596842 C2orf69Q8N8R5 385 aa14.97□□□□□ -0.01
UPF1-204ENST00000596842 TERB1Q8NA31 727 aa14.97□□□□□ -0.01
UPF1-204ENST00000596842 ASB8Q9H765 288 aa14.97□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 41.6 ms