RNA–Protein interactions for RNA: ENST00000593641.3

SSBP4-203, Transcript of single stranded DNA binding protein 4, humanhuman

TSL 5

Gene SSBP4, Length 900 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP4-203ENST00000593641 FAM69BQ5VUD6 431 aa21.96■■□□□ 1.11
SSBP4-203ENST00000593641 RAB43Q86YS6 212 aa21.96■■□□□ 1.11
SSBP4-203ENST00000593641 CCDC170Q8IYT3 715 aa21.96■■□□□ 1.11
SSBP4-203ENST00000593641 GPR135Q8IZ08 494 aa21.96■■□□□ 1.11
SSBP4-203ENST00000593641 DNAJC1Q96KC8 554 aaKnown RBP21.96■■□□□ 1.11
SSBP4-203ENST00000593641 TRAPPC9Q96Q05 1148 aa21.96■■□□□ 1.11
SSBP4-203ENST00000593641 FAM118BQ9BPY3 351 aa21.96■■□□□ 1.11
SSBP4-203ENST00000593641 SLAMF7Q9NQ25 335 aa21.96■■□□□ 1.11
SSBP4-203ENST00000593641 GPR83Q9NYM4 423 aa21.96■■□□□ 1.11
SSBP4-203ENST00000593641 ACTR10Q9NZ32 417 aa21.96■■□□□ 1.11
SSBP4-203ENST00000593641 PCDHA3Q9Y5H8 950 aa21.96■■□□□ 1.11
SSBP4-203ENST00000593641 TEX15Q9BXT5 2789 aa21.95■■□□□ 1.1
SSBP4-203ENST00000593641 IGLV3-16A0A075B6K0 115 aa21.95■■□□□ 1.1
SSBP4-203ENST00000593641 A6NL46 340 aa21.95■■□□□ 1.1
SSBP4-203ENST00000593641 LDB2O43679 373 aa21.95■■□□□ 1.1
SSBP4-203ENST00000593641 PTPN7P35236 360 aa21.95■■□□□ 1.1
SSBP4-203ENST00000593641 CYLC1P35663 651 aaPredicted RBP21.95■■□□□ 1.1
SSBP4-203ENST00000593641 SPARCL1Q14515 664 aa21.95■■□□□ 1.1
SSBP4-203ENST00000593641 JMJD6Q6NYC1 403 aaPredicted RBP21.95■■□□□ 1.1
SSBP4-203ENST00000593641 TAS2R42Q7RTR8 314 aa21.95■■□□□ 1.1
SSBP4-203ENST00000593641 TC2NQ8N9U0 490 aa21.95■■□□□ 1.1
SSBP4-203ENST00000593641 PHC3Q8NDX5 983 aa21.95■■□□□ 1.1
SSBP4-203ENST00000593641 TFGQ92734 400 aaPredicted RBP21.95■■□□□ 1.1
SSBP4-203ENST00000593641 NUDT9Q9BW91 350 aa21.95■■□□□ 1.1
SSBP4-203ENST00000593641 KLHL25Q9H0H3 589 aa21.95■■□□□ 1.1
SSBP4-203ENST00000593641 ARNT2Q9HBZ2 717 aa21.95■■□□□ 1.1
SSBP4-203ENST00000593641 ZNF749O43361 778 aa21.94■■□□□ 1.1
SSBP4-203ENST00000593641 TJP3O95049 919 aa21.94■■□□□ 1.1
SSBP4-203ENST00000593641 CAPN1P07384 714 aa21.94■■□□□ 1.1
SSBP4-203ENST00000593641 GSTM1P09488 218 aa21.94■■□□□ 1.1
SSBP4-203ENST00000593641 PVRP15151 417 aa21.94■■□□□ 1.1
SSBP4-203ENST00000593641 PDHA2P29803 388 aa21.94■■□□□ 1.1
SSBP4-203ENST00000593641 NAP1L1P55209 391 aaKnown RBP21.94■■□□□ 1.1
SSBP4-203ENST00000593641 GSTM4Q03013 218 aa21.94■■□□□ 1.1
SSBP4-203ENST00000593641 PRKG2Q13237 762 aa21.94■■□□□ 1.1
SSBP4-203ENST00000593641 DENND5AQ6IQ26 1287 aa21.94■■□□□ 1.1
SSBP4-203ENST00000593641 SERPINA9Q86WD7 417 aa21.94■■□□□ 1.1
SSBP4-203ENST00000593641 ZBTB2Q8N680 514 aa21.94■■□□□ 1.1
SSBP4-203ENST00000593641 SGSM3Q96HU1 749 aa21.94■■□□□ 1.1
SSBP4-203ENST00000593641 CALR3Q96L12 384 aaKnown RBP21.94■■□□□ 1.1
SSBP4-203ENST00000593641 C17orf62Q9BQA9 187 aa21.94■■□□□ 1.1
SSBP4-203ENST00000593641 DHRS4Q9BTZ2 278 aa21.94■■□□□ 1.1
SSBP4-203ENST00000593641 SLC29A3Q9BZD2 475 aa21.94■■□□□ 1.1
SSBP4-203ENST00000593641 XKR8Q9H6D3 395 aa21.94■■□□□ 1.1
SSBP4-203ENST00000593641 LUZP4Q9P127 313 aa21.94■■□□□ 1.1
SSBP4-203ENST00000593641 MAP10Q9P2G4 905 aa21.94■■□□□ 1.1
SSBP4-203ENST00000593641 TRBV5-4A0A0C4DH59 114 aa21.93■■□□□ 1.1
SSBP4-203ENST00000593641 H7C0S8 307 aa21.93■■□□□ 1.1
SSBP4-203ENST00000593641 VARSP26640 1264 aaKnown RBP21.93■■□□□ 1.1
SSBP4-203ENST00000593641 CDKN1CP49918 316 aaPredicted RBP21.93■■□□□ 1.1
SSBP4-203ENST00000593641 RWDD2BP57060 319 aa21.93■■□□□ 1.1
SSBP4-203ENST00000593641 ATP1A4Q13733 1029 aa21.93■■□□□ 1.1
SSBP4-203ENST00000593641 BOP1Q14137 746 aaKnown RBP21.93■■□□□ 1.1
SSBP4-203ENST00000593641 INPP5JQ15735 1006 aaPredicted RBP21.93■■□□□ 1.1
SSBP4-203ENST00000593641 SPESP1Q6UW49 350 aa21.93■■□□□ 1.1
SSBP4-203ENST00000593641 CDHR3Q6ZTQ4 885 aa21.93■■□□□ 1.1
SSBP4-203ENST00000593641 ADGRF3Q8IZF5 1079 aa21.93■■□□□ 1.1
SSBP4-203ENST00000593641 GLIS1Q8NBF1 620 aa21.93■■□□□ 1.1
SSBP4-203ENST00000593641 SSC4DQ8WTU2 575 aa21.93■■□□□ 1.1
SSBP4-203ENST00000593641 TBRG4Q969Z0 631 aaKnown RBP eCLIP21.93■■□□□ 1.1
SSBP4-203ENST00000593641 NRTNQ99748 197 aa21.93■■□□□ 1.1
SSBP4-203ENST00000593641 MFRPQ9BY79 579 aa21.93■■□□□ 1.1
SSBP4-203ENST00000593641 PLEKHB1Q9UF11 243 aaPredicted RBP21.93■■□□□ 1.1
SSBP4-203ENST00000593641 UNC79Q9P2D8 2635 aa21.92■■□□□ 1.1
SSBP4-203ENST00000593641 AP2A2O94973 939 aa21.92■■□□□ 1.1
SSBP4-203ENST00000593641 PTMAP06454 111 aaKnown RBP21.92■■□□□ 1.1
SSBP4-203ENST00000593641 OTX2P32243 289 aa21.92■■□□□ 1.1
SSBP4-203ENST00000593641 SHMT2P34897 504 aa21.92■■□□□ 1.1
SSBP4-203ENST00000593641 CACNG1Q06432 222 aa21.92■■□□□ 1.1
SSBP4-203ENST00000593641 ZNF658BQ4V348 819 aaPredicted RBP21.92■■□□□ 1.1
SSBP4-203ENST00000593641 SLC6A19Q695T7 634 aa21.92■■□□□ 1.1
SSBP4-203ENST00000593641 ARHGEF18Q6ZSZ5 1173 aa21.92■■□□□ 1.1
SSBP4-203ENST00000593641 CLDN19Q8N6F1 224 aa21.92■■□□□ 1.1
SSBP4-203ENST00000593641 C19orf47Q8N9M1 422 aaKnown RBP21.92■■□□□ 1.1
SSBP4-203ENST00000593641 PNPLA2Q96AD5 504 aa21.92■■□□□ 1.1
SSBP4-203ENST00000593641 ALS2CR12Q96Q35 445 aa21.92■■□□□ 1.1
SSBP4-203ENST00000593641 NLE1Q9NVX2 485 aaPredicted RBP21.92■■□□□ 1.1
SSBP4-203ENST00000593641 GPN3Q9UHW5 284 aaPredicted RBP21.92■■□□□ 1.1
SSBP4-203ENST00000593641 AP1M2Q9Y6Q5 423 aa21.92■■□□□ 1.1
SSBP4-203ENST00000593641 QSOX1O00391 747 aa21.91■■□□□ 1.1
SSBP4-203ENST00000593641 LIN7AO14910 233 aaPredicted RBP21.91■■□□□ 1.1
SSBP4-203ENST00000593641 OR2B3O76000 313 aa21.91■■□□□ 1.1
SSBP4-203ENST00000593641 IPO7O95373 1038 aaKnown RBP21.91■■□□□ 1.1
SSBP4-203ENST00000593641 PRSS56P0CW18 603 aa21.91■■□□□ 1.1
SSBP4-203ENST00000593641 KYNUQ16719 465 aa21.91■■□□□ 1.1
SSBP4-203ENST00000593641 PRR30Q53SZ7 412 aaPredicted RBP21.91■■□□□ 1.1
SSBP4-203ENST00000593641 STYXQ8WUJ0 223 aa21.91■■□□□ 1.1
SSBP4-203ENST00000593641 TCTN2Q96GX1 697 aa21.91■■□□□ 1.1
SSBP4-203ENST00000593641 IP6K3Q96PC2 410 aa21.91■■□□□ 1.1
SSBP4-203ENST00000593641 SMAD5Q99717 465 aaKnown RBP21.91■■□□□ 1.1
SSBP4-203ENST00000593641 TRIM5Q9C035 493 aa21.91■■□□□ 1.1
SSBP4-203ENST00000593641 CUEDC1Q9NWM3 386 aaPredicted RBP21.91■■□□□ 1.1
SSBP4-203ENST00000593641 SMARCAL1Q9NZC9 954 aa21.91■■□□□ 1.1
SSBP4-203ENST00000593641 ICKQ9UPZ9 632 aa21.91■■□□□ 1.1
SSBP4-203ENST00000593641 ASF1AQ9Y294 204 aa21.91■■□□□ 1.1
SSBP4-203ENST00000593641 RAPSNQ13702 412 aa21.9■■□□□ 1.1
SSBP4-203ENST00000593641 POU6F1Q14863 301 aa21.9■■□□□ 1.1
SSBP4-203ENST00000593641 PARP6Q2NL67 630 aa21.9■■□□□ 1.1
SSBP4-203ENST00000593641 VWA5B1Q5TIE3 1220 aa21.9■■□□□ 1.1
SSBP4-203ENST00000593641 MLIPQ5VWP3 458 aa21.9■■□□□ 1.1
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms