RNA–Protein interactions for RNA: ENST00000593089.1

TRIM47-207, Transcript of tripartite motif containing 47, humanhuman

TSL 2

Gene TRIM47, Length 392 nt, Biotype retained intron, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM47-207ENST00000593089 PTCHD3Q3KNS1 767 aa19.84■□□□□ 0.77
TRIM47-207ENST00000593089 NADK2Q4G0N4 442 aa19.84■□□□□ 0.77
TRIM47-207ENST00000593089 PIANPQ8IYJ0 282 aa19.84■□□□□ 0.77
TRIM47-207ENST00000593089 SYTL1Q8IYJ3 562 aa19.84■□□□□ 0.77
TRIM47-207ENST00000593089 ADGRF3Q8IZF5 1079 aa19.84■□□□□ 0.77
TRIM47-207ENST00000593089 LRRC57Q8N9N7 239 aa19.84■□□□□ 0.77
TRIM47-207ENST00000593089 CDKN2AIPNLQ96HQ2 116 aa19.84■□□□□ 0.77
TRIM47-207ENST00000593089 NLNQ9BYT8 704 aa19.84■□□□□ 0.77
TRIM47-207ENST00000593089 LRRC40Q9H9A6 602 aa19.84■□□□□ 0.77
TRIM47-207ENST00000593089 ACTR10Q9NZ32 417 aa19.84■□□□□ 0.77
TRIM47-207ENST00000593089 SMARCAL1Q9NZC9 954 aa19.84■□□□□ 0.77
TRIM47-207ENST00000593089 SERTAD3Q9UJW9 196 aa19.84■□□□□ 0.77
TRIM47-207ENST00000593089 PACSIN2Q9UNF0 486 aaPredicted RBP19.84■□□□□ 0.77
TRIM47-207ENST00000593089 PCDHGA9Q9Y5G4 932 aaKnown RBP19.84■□□□□ 0.77
TRIM47-207ENST00000593089 VPS4BO75351 444 aa19.83■□□□□ 0.77
TRIM47-207ENST00000593089 TMEM63AO94886 807 aa19.83■□□□□ 0.77
TRIM47-207ENST00000593089 CAPN1P07384 714 aa19.83■□□□□ 0.77
TRIM47-207ENST00000593089 ZNF75DP51815 510 aa19.83■□□□□ 0.77
TRIM47-207ENST00000593089 GDF10P55107 478 aa19.83■□□□□ 0.77
TRIM47-207ENST00000593089 ITGA1P56199 1179 aa19.83■□□□□ 0.77
TRIM47-207ENST00000593089 FAM198BQ6UWH4 519 aa19.83■□□□□ 0.77
TRIM47-207ENST00000593089 CDHR3Q6ZTQ4 885 aa19.83■□□□□ 0.77
TRIM47-207ENST00000593089 EFCAB3Q8N7B9 438 aa19.83■□□□□ 0.77
TRIM47-207ENST00000593089 TTC13Q8NBP0 860 aa19.83■□□□□ 0.77
TRIM47-207ENST00000593089 STYXQ8WUJ0 223 aa19.83■□□□□ 0.77
TRIM47-207ENST00000593089 MLXIPLQ9NP71 852 aa19.83■□□□□ 0.77
TRIM47-207ENST00000593089 AMFRQ9UKV5 643 aa19.83■□□□□ 0.77
TRIM47-207ENST00000593089 VPS4AQ9UN37 437 aa19.83■□□□□ 0.77
TRIM47-207ENST00000593089 ICKQ9UPZ9 632 aa19.83■□□□□ 0.77
TRIM47-207ENST00000593089 PRSS21Q9Y6M0 314 aa19.83■□□□□ 0.77
TRIM47-207ENST00000593089 E7EQ34 232 aa19.82■□□□□ 0.76
TRIM47-207ENST00000593089 ZNF749O43361 778 aa19.82■□□□□ 0.76
TRIM47-207ENST00000593089 AP2A2O94973 939 aa19.82■□□□□ 0.76
TRIM47-207ENST00000593089 MSL3P1P0C860 447 aa19.82■□□□□ 0.76
TRIM47-207ENST00000593089 UQCRFS1P47985 274 aa19.82■□□□□ 0.76
TRIM47-207ENST00000593089 VAV2P52735 878 aa19.82■□□□□ 0.76
TRIM47-207ENST00000593089 BRD3Q15059 726 aa19.82■□□□□ 0.76
TRIM47-207ENST00000593089 SPESP1Q6UW49 350 aa19.82■□□□□ 0.76
TRIM47-207ENST00000593089 PEX26Q7Z412 305 aa19.82■□□□□ 0.76
TRIM47-207ENST00000593089 TRIM73Q86UV7 250 aa19.82■□□□□ 0.76
TRIM47-207ENST00000593089 HOOK3Q86VS8 718 aa19.82■□□□□ 0.76
TRIM47-207ENST00000593089 OR5AR1Q8NGP9 310 aa19.82■□□□□ 0.76
TRIM47-207ENST00000593089 CPT1CQ8TCG5 803 aa19.82■□□□□ 0.76
TRIM47-207ENST00000593089 ELMO1Q92556 727 aa19.82■□□□□ 0.76
TRIM47-207ENST00000593089 ALS2CR12Q96Q35 445 aa19.82■□□□□ 0.76
TRIM47-207ENST00000593089 TMEM121Q9BTD3 319 aa19.82■□□□□ 0.76
TRIM47-207ENST00000593089 OR51F1A6NGY5 319 aa19.81■□□□□ 0.76
TRIM47-207ENST00000593089 ZNF185O15231 689 aa19.81■□□□□ 0.76
TRIM47-207ENST00000593089 AP2A1O95782 977 aa19.81■□□□□ 0.76
TRIM47-207ENST00000593089 GSTM1P09488 218 aa19.81■□□□□ 0.76
TRIM47-207ENST00000593089 NSG1P42857 185 aa19.81■□□□□ 0.76
TRIM47-207ENST00000593089 GSTM4Q03013 218 aa19.81■□□□□ 0.76
TRIM47-207ENST00000593089 P3H1Q32P28 736 aa19.81■□□□□ 0.76
TRIM47-207ENST00000593089 NAPRTQ6XQN6 538 aa19.81■□□□□ 0.76
TRIM47-207ENST00000593089 KIAA1328Q86T90 577 aa19.81■□□□□ 0.76
TRIM47-207ENST00000593089 UBL4BQ8N7F7 174 aa19.81■□□□□ 0.76
TRIM47-207ENST00000593089 N4BP2L2Q92802 583 aaPredicted RBP19.81■□□□□ 0.76
TRIM47-207ENST00000593089 ASF1AQ9Y294 204 aa19.81■□□□□ 0.76
TRIM47-207ENST00000593089 R3HDM2Q9Y2K5 976 aaKnown RBP19.81■□□□□ 0.76
TRIM47-207ENST00000593089 A6NL46 340 aa19.8■□□□□ 0.76
TRIM47-207ENST00000593089 LIN7AO14910 233 aaPredicted RBP19.8■□□□□ 0.76
TRIM47-207ENST00000593089 PSMD3O43242 534 aa19.8■□□□□ 0.76
TRIM47-207ENST00000593089 ATXN8OSP0DMR3 200 aa19.8■□□□□ 0.76
TRIM47-207ENST00000593089 GP1BBP13224 206 aa19.8■□□□□ 0.76
TRIM47-207ENST00000593089 UGT2B7P16662 529 aa19.8■□□□□ 0.76
TRIM47-207ENST00000593089 GNLYP22749 145 aa19.8■□□□□ 0.76
TRIM47-207ENST00000593089 MSNP26038 577 aaKnown RBP19.8■□□□□ 0.76
TRIM47-207ENST00000593089 NCF4Q15080 339 aa19.8■□□□□ 0.76
TRIM47-207ENST00000593089 DEFB110Q30KQ9 67 aa19.8■□□□□ 0.76
TRIM47-207ENST00000593089 CCDC38Q502W7 563 aa19.8■□□□□ 0.76
TRIM47-207ENST00000593089 PAPD7Q5XG87 772 aaKnown RBP19.8■□□□□ 0.76
TRIM47-207ENST00000593089 UNC5AQ6ZN44 842 aa19.8■□□□□ 0.76
TRIM47-207ENST00000593089 GPR135Q8IZ08 494 aa19.8■□□□□ 0.76
TRIM47-207ENST00000593089 ZBTB2Q8N680 514 aa19.8■□□□□ 0.76
TRIM47-207ENST00000593089 C19orf47Q8N9M1 422 aaKnown RBP19.8■□□□□ 0.76
TRIM47-207ENST00000593089 FDCSPQ8NFU4 85 aa19.8■□□□□ 0.76
TRIM47-207ENST00000593089 MRFAP1L1Q96HT8 127 aa19.8■□□□□ 0.76
TRIM47-207ENST00000593089 FAM60AQ9NP50 221 aa19.8■□□□□ 0.76
TRIM47-207ENST00000593089 TDRKHQ9Y2W6 561 aaKnown RBP19.8■□□□□ 0.76
TRIM47-207ENST00000593089 ZNF451Q9Y4E5 1061 aa19.8■□□□□ 0.76
TRIM47-207ENST00000593089 LRRK2Q5S007 2527 aa19.8■□□□□ 0.76
TRIM47-207ENST00000593089 TCRBV7S2A1N4TA0A589 114 aa19.79■□□□□ 0.76
TRIM47-207ENST00000593089 BLACEA4D250 179 aa19.79■□□□□ 0.76
TRIM47-207ENST00000593089 MROH6A6NGR9 719 aa19.79■□□□□ 0.76
TRIM47-207ENST00000593089 C9J4A7 227 aa19.79■□□□□ 0.76
TRIM47-207ENST00000593089 CEACAM4O75871 244 aa19.79■□□□□ 0.76
TRIM47-207ENST00000593089 FTCDO95954 541 aa19.79■□□□□ 0.76
TRIM47-207ENST00000593089 FTH1P02794 183 aa19.79■□□□□ 0.76
TRIM47-207ENST00000593089 HBQ1P09105 142 aa19.79■□□□□ 0.76
TRIM47-207ENST00000593089 AGXTP21549 392 aa19.79■□□□□ 0.76
TRIM47-207ENST00000593089 SHMT2P34897 504 aa19.79■□□□□ 0.76
TRIM47-207ENST00000593089 KLF1Q13351 362 aaPredicted RBP19.79■□□□□ 0.76
TRIM47-207ENST00000593089 ATP1A4Q13733 1029 aa19.79■□□□□ 0.76
TRIM47-207ENST00000593089 ITIH4Q14624 930 aa19.79■□□□□ 0.76
TRIM47-207ENST00000593089 SYTL3Q4VX76 610 aa19.79■□□□□ 0.76
TRIM47-207ENST00000593089 OR52K1Q8NGK4 314 aa19.79■□□□□ 0.76
TRIM47-207ENST00000593089 SLC35B2Q8TB61 432 aa19.79■□□□□ 0.76
TRIM47-207ENST00000593089 DPH2Q9BQC3 489 aaPredicted RBP19.79■□□□□ 0.76
TRIM47-207ENST00000593089 NUDT9Q9BW91 350 aa19.79■□□□□ 0.76
TRIM47-207ENST00000593089 MFRPQ9BY79 579 aa19.79■□□□□ 0.76
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms