RNA–Protein interactions for RNA: ENST00000591935.5

CIRBP-235, Transcript of cold inducible RNA binding protein, humanhuman

APPRIS ALT1 TSL 3 BASIC

Gene CIRBP, Length 746 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIRBP-235ENST00000591935 PKP3Q9Y446 797 aa17.07■□□□□ 0.32
CIRBP-235ENST00000591935 PCDHGA4Q9Y5G9 962 aa17.07■□□□□ 0.32
CIRBP-235ENST00000591935 ZNF106Q9H2Y7 1883 aaKnown RBP17.06■□□□□ 0.32
CIRBP-235ENST00000591935 IQANK1A0A1B0GTG1 560 aa17.06■□□□□ 0.32
CIRBP-235ENST00000591935 PDZK1P1A8MUH7 402 aa17.06■□□□□ 0.32
CIRBP-235ENST00000591935 ANXA9O76027 345 aa17.06■□□□□ 0.32
CIRBP-235ENST00000591935 SFTPCP11686 197 aa17.06■□□□□ 0.32
CIRBP-235ENST00000591935 KRT15P19012 456 aa17.06■□□□□ 0.32
CIRBP-235ENST00000591935 DRD4P21917 467 aa17.06■□□□□ 0.32
CIRBP-235ENST00000591935 IDSP22304 550 aa17.06■□□□□ 0.32
CIRBP-235ENST00000591935 OLIG2Q13516 323 aa17.06■□□□□ 0.32
CIRBP-235ENST00000591935 ITGA9Q13797 1035 aa17.06■□□□□ 0.32
CIRBP-235ENST00000591935 SEPT7Q16181 437 aaKnown RBP17.06■□□□□ 0.32
CIRBP-235ENST00000591935 LDLRAP1Q5SW96 308 aa17.06■□□□□ 0.32
CIRBP-235ENST00000591935 LGSNQ5TDP6 509 aa17.06■□□□□ 0.32
CIRBP-235ENST00000591935 AGAP9Q5VTM2 703 aa17.06■□□□□ 0.32
CIRBP-235ENST00000591935 ITPRIPL1Q6GPH6 555 aa17.06■□□□□ 0.32
CIRBP-235ENST00000591935 ABRAXAS1Q6UWZ7 409 aa17.06■□□□□ 0.32
CIRBP-235ENST00000591935 CEACAM20Q6UY09 585 aa17.06■□□□□ 0.32
CIRBP-235ENST00000591935 TMEM26Q6ZUK4 368 aa17.06■□□□□ 0.32
CIRBP-235ENST00000591935 GLT6D1Q7Z4J2 308 aa17.06■□□□□ 0.32
CIRBP-235ENST00000591935 IGDCC3Q8IVU1 814 aa17.06■□□□□ 0.32
CIRBP-235ENST00000591935 SRRM1Q8IYB3 904 aaKnown RBP17.06■□□□□ 0.32
CIRBP-235ENST00000591935 SLC44A1Q8WWI5 657 aa17.06■□□□□ 0.32
CIRBP-235ENST00000591935 CKAP2Q8WWK9 683 aa17.06■□□□□ 0.32
CIRBP-235ENST00000591935 NKD1Q969G9 470 aa17.06■□□□□ 0.32
CIRBP-235ENST00000591935 PAFAH2Q99487 392 aa17.06■□□□□ 0.32
CIRBP-235ENST00000591935 NSRP1Q9H0G5 558 aaKnown RBP17.06■□□□□ 0.32
CIRBP-235ENST00000591935 FBXO8Q9NRD0 319 aa17.06■□□□□ 0.32
CIRBP-235ENST00000591935 POT1Q9NUX5 634 aa17.06■□□□□ 0.32
CIRBP-235ENST00000591935 ZC3H7BQ9UGR2 993 aaKnown RBP17.06■□□□□ 0.32
CIRBP-235ENST00000591935 TBK1Q9UHD2 729 aa17.06■□□□□ 0.32
CIRBP-235ENST00000591935 ZNF180Q9UJW8 692 aa17.06■□□□□ 0.32
CIRBP-235ENST00000591935 PRDM4Q9UKN5 801 aa17.06■□□□□ 0.32
CIRBP-235ENST00000591935 SLC30A1Q9Y6M5 507 aa17.06■□□□□ 0.32
CIRBP-235ENST00000591935 TCRBV9S1A1TA0A576 114 aa17.05■□□□□ 0.32
CIRBP-235ENST00000591935 SDR42E2A6NKP2 422 aa17.05■□□□□ 0.32
CIRBP-235ENST00000591935 AP3B1O00203 1094 aa17.05■□□□□ 0.32
CIRBP-235ENST00000591935 GAPDHSO14556 408 aaPredicted RBP17.05■□□□□ 0.32
CIRBP-235ENST00000591935 CAPN5O15484 640 aaPredicted RBP17.05■□□□□ 0.32
CIRBP-235ENST00000591935 PLA2G2AP14555 144 aa17.05■□□□□ 0.32
CIRBP-235ENST00000591935 RPL10P27635 214 aaKnown RBP17.05■□□□□ 0.32
CIRBP-235ENST00000591935 GEMP55040 296 aa17.05■□□□□ 0.32
CIRBP-235ENST00000591935 STEAP4Q687X5 459 aa17.05■□□□□ 0.32
CIRBP-235ENST00000591935 ANKS6Q68DC2 871 aa17.05■□□□□ 0.32
CIRBP-235ENST00000591935 ZNF449Q6P9G9 518 aa17.05■□□□□ 0.32
CIRBP-235ENST00000591935 FAM151BQ6UXP7 276 aa17.05■□□□□ 0.32
CIRBP-235ENST00000591935 ZNF534Q76KX8 674 aa17.05■□□□□ 0.32
CIRBP-235ENST00000591935 CPLX4Q7Z7G2 160 aa17.05■□□□□ 0.32
CIRBP-235ENST00000591935 TRAPPC5Q8IUR0 188 aa17.05■□□□□ 0.32
CIRBP-235ENST00000591935 RASGEF1AQ8N9B8 481 aa17.05■□□□□ 0.32
CIRBP-235ENST00000591935 DCAKDQ8WVC6 231 aa17.05■□□□□ 0.32
CIRBP-235ENST00000591935 DYDC1Q8WWB3 177 aa17.05■□□□□ 0.32
CIRBP-235ENST00000591935 PPP1R2P1Q96PQ5 205 aa17.05■□□□□ 0.32
CIRBP-235ENST00000591935 APOL2Q9BQE5 337 aa17.05■□□□□ 0.32
CIRBP-235ENST00000591935 FICDQ9BVA6 458 aa17.05■□□□□ 0.32
CIRBP-235ENST00000591935 GBA3Q9H227 469 aa17.05■□□□□ 0.32
CIRBP-235ENST00000591935 KLHL3Q9UH77 587 aa17.05■□□□□ 0.32
CIRBP-235ENST00000591935 DNMT3AQ9Y6K1 912 aaPredicted RBP17.05■□□□□ 0.32
CIRBP-235ENST00000591935 IKBKGQ9Y6K9 419 aa17.05■□□□□ 0.32
CIRBP-235ENST00000591935 MN1Q10571 1320 aaPredicted RBP17.04■□□□□ 0.32
CIRBP-235ENST00000591935 GLYATL1P3A0A0U1RQE8 302 aa17.04■□□□□ 0.32
CIRBP-235ENST00000591935 B8ZZF3 427 aa17.04■□□□□ 0.32
CIRBP-235ENST00000591935 TOX3O15405 576 aaPredicted RBP17.04■□□□□ 0.32
CIRBP-235ENST00000591935 UBXN7O94888 489 aa17.04■□□□□ 0.32
CIRBP-235ENST00000591935 SUN1O94901 812 aa17.04■□□□□ 0.32
CIRBP-235ENST00000591935 ANKRD34CP0C6C1 535 aa17.04■□□□□ 0.32
CIRBP-235ENST00000591935 CREB1P16220 341 aa17.04■□□□□ 0.32
CIRBP-235ENST00000591935 TYRP1P17643 537 aa17.04■□□□□ 0.32
CIRBP-235ENST00000591935 AMD1P17707 334 aa17.04■□□□□ 0.32
CIRBP-235ENST00000591935 HALP42357 657 aa17.04■□□□□ 0.32
CIRBP-235ENST00000591935 CYP4F2P78329 520 aa17.04■□□□□ 0.32
CIRBP-235ENST00000591935 PRPSAP1Q14558 356 aa17.04■□□□□ 0.32
CIRBP-235ENST00000591935 LINC00303Q3SY05 128 aa17.04■□□□□ 0.32
CIRBP-235ENST00000591935 GKAP1Q5VSY0 366 aaPredicted RBP17.04■□□□□ 0.32
CIRBP-235ENST00000591935 SLC26A11Q86WA9 606 aa17.04■□□□□ 0.32
CIRBP-235ENST00000591935 KLHDC8BQ8IXV7 354 aa17.04■□□□□ 0.32
CIRBP-235ENST00000591935 CACNA2D3Q8IZS8 1091 aa17.04■□□□□ 0.32
CIRBP-235ENST00000591935 GSDMBQ8TAX9 411 aa17.04■□□□□ 0.32
CIRBP-235ENST00000591935 DENND1AQ8TEH3 1009 aa17.04■□□□□ 0.32
CIRBP-235ENST00000591935 MAGEB18Q96M61 343 aa17.04■□□□□ 0.32
CIRBP-235ENST00000591935 CTRCQ99895 268 aa17.04■□□□□ 0.32
CIRBP-235ENST00000591935 EFHD1Q9BUP0 239 aa17.04■□□□□ 0.32
CIRBP-235ENST00000591935 TRIT1Q9H3H1 467 aaKnown RBP17.04■□□□□ 0.32
CIRBP-235ENST00000591935 APMAPQ9HDC9 416 aa17.04■□□□□ 0.32
CIRBP-235ENST00000591935 WDR37Q9Y2I8 494 aa17.04■□□□□ 0.32
CIRBP-235ENST00000591935 AAR2Q9Y312 384 aaKnown RBP17.04■□□□□ 0.32
CIRBP-235ENST00000591935 KCTD3Q9Y597 815 aa17.04■□□□□ 0.32
CIRBP-235ENST00000591935 OR52A4PA6NMU1 304 aa17.03■□□□□ 0.32
CIRBP-235ENST00000591935 C2orf81A6NN90 581 aa17.03■□□□□ 0.32
CIRBP-235ENST00000591935 POLR1CO15160 346 aaPredicted RBP17.03■□□□□ 0.32
CIRBP-235ENST00000591935 RAD1O60671 282 aa17.03■□□□□ 0.32
CIRBP-235ENST00000591935 C1QAP02745 245 aa17.03■□□□□ 0.32
CIRBP-235ENST00000591935 C9P02748 559 aa17.03■□□□□ 0.32
CIRBP-235ENST00000591935 INHBAP08476 426 aa17.03■□□□□ 0.32
CIRBP-235ENST00000591935 MAP4P27816 1152 aaKnown RBP17.03■□□□□ 0.32
CIRBP-235ENST00000591935 PSMB4P28070 264 aa17.03■□□□□ 0.32
CIRBP-235ENST00000591935 ADRA1AP35348 466 aa17.03■□□□□ 0.32
CIRBP-235ENST00000591935 SERPINB9P50453 376 aa17.03■□□□□ 0.32
CIRBP-235ENST00000591935 CTSCP53634 463 aa17.03■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 48 ms