RNA–Protein interactions for RNA: ENST00000591782.1

VMP1-212, Transcript of vacuole membrane protein 1, humanhuman

TSL 5

Gene VMP1, Length 729 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1-212ENST00000591782 ZNF385AQ96PM9 386 aaKnown RBP3.41□□□□□ -1.86
VMP1-212ENST00000591782 TSGA13Q96PP4 275 aa3.41□□□□□ -1.86
VMP1-212ENST00000591782 TSC22D3Q99576 134 aa3.41□□□□□ -1.86
VMP1-212ENST00000591782 CMKLR1Q99788 373 aa3.41□□□□□ -1.86
VMP1-212ENST00000591782 RIOK1Q9BRS2 568 aaKnown RBP3.41□□□□□ -1.86
VMP1-212ENST00000591782 PANK2Q9BZ23 570 aa3.41□□□□□ -1.86
VMP1-212ENST00000591782 PDZD7Q9H5P4 517 aa3.41□□□□□ -1.86
VMP1-212ENST00000591782 PCDH9Q9HC56 1237 aa3.41□□□□□ -1.86
VMP1-212ENST00000591782 LTB4R2Q9NPC1 389 aa3.41□□□□□ -1.86
VMP1-212ENST00000591782 RRP7BPQ9NSQ0 103 aa3.41□□□□□ -1.86
VMP1-212ENST00000591782 TBC1D22BQ9NU19 505 aa3.41□□□□□ -1.86
VMP1-212ENST00000591782 INTS10Q9NVR2 710 aaKnown RBP3.41□□□□□ -1.86
VMP1-212ENST00000591782 ANO10Q9NW15 660 aa3.41□□□□□ -1.86
VMP1-212ENST00000591782 MCM9Q9NXL9 1143 aa3.41□□□□□ -1.86
VMP1-212ENST00000591782 TUBGCP4Q9UGJ1 667 aa3.41□□□□□ -1.86
VMP1-212ENST00000591782 PROCRQ9UNN8 238 aa3.41□□□□□ -1.86
VMP1-212ENST00000591782 CHMP2BQ9UQN3 213 aa3.41□□□□□ -1.86
VMP1-212ENST00000591782 YEATS2Q9ULM3 1422 aa3.41□□□□□ -1.86
VMP1-212ENST00000591782 ELP1O95163 1332 aa3.41□□□□□ -1.86
VMP1-212ENST00000591782 MAP3K19Q56UN5 1328 aa3.41□□□□□ -1.86
VMP1-212ENST00000591782 NOTCH4Q99466 2003 aa3.41□□□□□ -1.86
VMP1-212ENST00000591782 SBNO1A3KN83 1393 aa3.4□□□□□ -1.86
VMP1-212ENST00000591782 GIMAP1-GIMAP5A0A087WTJ2 511 aa3.4□□□□□ -1.87
VMP1-212ENST00000591782 MAGEA13PA6NCF6 341 aa3.4□□□□□ -1.87
VMP1-212ENST00000591782 TMEM221A6NGB7 291 aa3.4□□□□□ -1.87
VMP1-212ENST00000591782 KRTAP29-1A8MX34 341 aaPredicted RBP3.4□□□□□ -1.87
VMP1-212ENST00000591782 FHAD1B1AJZ9 1412 aa3.4□□□□□ -1.87
VMP1-212ENST00000591782 B4DLN1 442 aa3.4□□□□□ -1.87
VMP1-212ENST00000591782 ZNF587BE7ETH6 402 aa3.4□□□□□ -1.87
VMP1-212ENST00000591782 AP3B1O00203 1094 aa3.4□□□□□ -1.87
VMP1-212ENST00000591782 CACNB4O00305 520 aaPredicted RBP3.4□□□□□ -1.87
VMP1-212ENST00000591782 NDUFS3O75489 264 aa3.4□□□□□ -1.87
VMP1-212ENST00000591782 RPS6KA5O75582 802 aa3.4□□□□□ -1.87
VMP1-212ENST00000591782 GFPT2O94808 682 aa3.4□□□□□ -1.87
VMP1-212ENST00000591782 DDNO94850 711 aaPredicted RBP3.4□□□□□ -1.87
VMP1-212ENST00000591782 MT-ND3P03897 115 aa3.4□□□□□ -1.87
VMP1-212ENST00000591782 KRT7P08729 469 aa3.4□□□□□ -1.87
VMP1-212ENST00000591782 CLTAP09496 248 aa3.4□□□□□ -1.87
VMP1-212ENST00000591782 GZMAP12544 262 aa3.4□□□□□ -1.87
VMP1-212ENST00000591782 RARGP13631 454 aa3.4□□□□□ -1.87
VMP1-212ENST00000591782 GLULP15104 373 aa3.4□□□□□ -1.87
VMP1-212ENST00000591782 HOXB6P17509 224 aaKnown RBP3.4□□□□□ -1.87
VMP1-212ENST00000591782 S1PR1P21453 382 aa3.4□□□□□ -1.87
VMP1-212ENST00000591782 ACAT1P24752 427 aaKnown RBP3.4□□□□□ -1.87
VMP1-212ENST00000591782 HOXC9P31274 260 aa3.4□□□□□ -1.87
VMP1-212ENST00000591782 ACTN2P35609 894 aa3.4□□□□□ -1.87
VMP1-212ENST00000591782 PPARGP37231 505 aaPredicted RBP3.4□□□□□ -1.87
VMP1-212ENST00000591782 TMPOP42166 694 aaKnown RBP3.4□□□□□ -1.87
VMP1-212ENST00000591782 ATP5OP48047 213 aa3.4□□□□□ -1.87
VMP1-212ENST00000591782 ACADVLP49748 655 aa3.4□□□□□ -1.87
VMP1-212ENST00000591782 SERPINB8P50452 374 aa3.4□□□□□ -1.87
VMP1-212ENST00000591782 GSDMDP57764 484 aa3.4□□□□□ -1.87
VMP1-212ENST00000591782 RPP38P78345 283 aaKnown RBP3.4□□□□□ -1.87
VMP1-212ENST00000591782 FOXM1Q08050 763 aa3.4□□□□□ -1.87
VMP1-212ENST00000591782 IFFO1Q0D2I5 559 aa3.4□□□□□ -1.87
VMP1-212ENST00000591782 KLHL30Q0D2K2 578 aa3.4□□□□□ -1.87
VMP1-212ENST00000591782 COTL1Q14019 142 aa3.4□□□□□ -1.87
VMP1-212ENST00000591782 KCNT1Q5JUK3 1230 aa3.4□□□□□ -1.87
VMP1-212ENST00000591782 RNASEH2BQ5TBB1 312 aaKnown RBP3.4□□□□□ -1.87
VMP1-212ENST00000591782 AADACL4Q5VUY2 407 aa3.4□□□□□ -1.87
VMP1-212ENST00000591782 FRG2Q64ET8 278 aa3.4□□□□□ -1.87
VMP1-212ENST00000591782 GPR139Q6DWJ6 353 aa3.4□□□□□ -1.87
VMP1-212ENST00000591782 TMEM53Q6P2H8 277 aa3.4□□□□□ -1.87
VMP1-212ENST00000591782 FAM122CQ6P4D5 195 aa3.4□□□□□ -1.87
VMP1-212ENST00000591782 SPSB3Q6PJ21 355 aa3.4□□□□□ -1.87
VMP1-212ENST00000591782 GLDNQ6ZMI3 551 aaPredicted RBP3.4□□□□□ -1.87
VMP1-212ENST00000591782 LPCAT2Q7L5N7 544 aa3.4□□□□□ -1.87
VMP1-212ENST00000591782 CACNA2D4Q7Z3S7 1137 aa3.4□□□□□ -1.87
VMP1-212ENST00000591782 BNIPLQ7Z465 357 aa3.4□□□□□ -1.87
VMP1-212ENST00000591782 SATL1Q86VE3 508 aa3.4□□□□□ -1.87
VMP1-212ENST00000591782 VSIG1Q86XK7 387 aa3.4□□□□□ -1.87
VMP1-212ENST00000591782 GRAMD2AQ8IUY3 354 aa3.4□□□□□ -1.87
VMP1-212ENST00000591782 ODF3L1Q8IXM7 274 aa3.4□□□□□ -1.87
VMP1-212ENST00000591782 ST13P4Q8IZP2 240 aaPredicted RBP3.4□□□□□ -1.87
VMP1-212ENST00000591782 SRBD1Q8N5C6 995 aaKnown RBP3.4□□□□□ -1.87
VMP1-212ENST00000591782 MAB21L3Q8N8X9 362 aa3.4□□□□□ -1.87
VMP1-212ENST00000591782 ZNF441Q8N8Z8 693 aa3.4□□□□□ -1.87
VMP1-212ENST00000591782 DNAAF3Q8N9W5 541 aa3.4□□□□□ -1.87
VMP1-212ENST00000591782 OR52K1Q8NGK4 314 aa3.4□□□□□ -1.87
VMP1-212ENST00000591782 HMGCLL1Q8TB92 370 aa3.4□□□□□ -1.87
VMP1-212ENST00000591782 SLC26A7Q8TE54 656 aa3.4□□□□□ -1.87
VMP1-212ENST00000591782 UTP15Q8TED0 518 aaKnown RBP3.4□□□□□ -1.87
VMP1-212ENST00000591782 DUSP19Q8WTR2 217 aa3.4□□□□□ -1.87
VMP1-212ENST00000591782 DDI1Q8WTU0 396 aa3.4□□□□□ -1.87
VMP1-212ENST00000591782 APBB2Q92870 758 aa3.4□□□□□ -1.87
VMP1-212ENST00000591782 RHBDF1Q96CC6 855 aa3.4□□□□□ -1.87
VMP1-212ENST00000591782 SPDL1Q96EA4 605 aa3.4□□□□□ -1.87
VMP1-212ENST00000591782 C11orf24Q96F05 449 aaPredicted RBP3.4□□□□□ -1.87
VMP1-212ENST00000591782 GIMAP5Q96F15 307 aa3.4□□□□□ -1.87
VMP1-212ENST00000591782 ABHD8Q96I13 439 aa3.4□□□□□ -1.87
VMP1-212ENST00000591782 ANKRD27Q96NW4 1050 aa3.4□□□□□ -1.87
VMP1-212ENST00000591782 MIA2Q96PC5 1412 aa3.4□□□□□ -1.87
VMP1-212ENST00000591782 RSF1Q96T23 1441 aaPredicted RBP3.4□□□□□ -1.87
VMP1-212ENST00000591782 PCYT2Q99447 389 aa3.4□□□□□ -1.87
VMP1-212ENST00000591782 SDF4Q9BRK5 362 aa3.4□□□□□ -1.87
VMP1-212ENST00000591782 CHCHD6Q9BRQ6 235 aa3.4□□□□□ -1.87
VMP1-212ENST00000591782 ADPGKQ9BRR6 497 aa3.4□□□□□ -1.87
VMP1-212ENST00000591782 NT5C3AQ9H0P0 336 aa3.4□□□□□ -1.87
VMP1-212ENST00000591782 SMARCAD1Q9H4L7 1026 aa3.4□□□□□ -1.87
VMP1-212ENST00000591782 ZSCAN16Q9H4T2 348 aaPredicted RBP3.4□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 49.3 ms