RNA–Protein interactions for RNA: ENST00000591534.5

BRCA1-226, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best) BASIC

Gene BRCA1, Length 1,282 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-226ENST00000591534 PMPCBO75439 489 aa9.21□□□□□ -0.94
BRCA1-226ENST00000591534 POP7O75817 140 aaKnown RBP9.21□□□□□ -0.94
BRCA1-226ENST00000591534 ZRANB2O95218 330 aaKnown RBP eCLIP9.21□□□□□ -0.94
BRCA1-226ENST00000591534 SLU7O95391 586 aaKnown RBP9.21□□□□□ -0.94
BRCA1-226ENST00000591534 EPOP01588 193 aa9.21□□□□□ -0.94
BRCA1-226ENST00000591534 PIRTP0C851 137 aa9.21□□□□□ -0.94
BRCA1-226ENST00000591534 BRAFP15056 766 aa9.21□□□□□ -0.94
BRCA1-226ENST00000591534 CTNNA2P26232 953 aa9.21□□□□□ -0.94
BRCA1-226ENST00000591534 CTNNA1P35221 906 aaKnown RBP9.21□□□□□ -0.94
BRCA1-226ENST00000591534 SPAM1P38567 509 aa9.21□□□□□ -0.94
BRCA1-226ENST00000591534 ADH7P40394 386 aa9.21□□□□□ -0.94
BRCA1-226ENST00000591534 MLLT10P55197 1068 aa9.21□□□□□ -0.94
BRCA1-226ENST00000591534 DMPKQ09013 629 aa9.21□□□□□ -0.94
BRCA1-226ENST00000591534 PRKAA1Q13131 559 aa9.21□□□□□ -0.94
BRCA1-226ENST00000591534 XRCC4Q13426 336 aa9.21□□□□□ -0.94
BRCA1-226ENST00000591534 TFDP2Q14188 446 aa9.21□□□□□ -0.94
BRCA1-226ENST00000591534 KRT33BQ14525 404 aa9.21□□□□□ -0.94
BRCA1-226ENST00000591534 LLGL1Q15334 1064 aa9.21□□□□□ -0.94
BRCA1-226ENST00000591534 ATP13A5Q4VNC0 1218 aa9.21□□□□□ -0.94
BRCA1-226ENST00000591534 TEX44Q53QW1 395 aa9.21□□□□□ -0.94
BRCA1-226ENST00000591534 SLC9A4Q6AI14 798 aa9.21□□□□□ -0.94
BRCA1-226ENST00000591534 PWWP2BQ6NUJ5 590 aa9.21□□□□□ -0.94
BRCA1-226ENST00000591534 NPNTQ6UXI9 565 aa9.21□□□□□ -0.94
BRCA1-226ENST00000591534 RFX6Q8HWS3 928 aa9.21□□□□□ -0.94
BRCA1-226ENST00000591534 TMEM126BQ8IUX1 230 aa9.21□□□□□ -0.94
BRCA1-226ENST00000591534 ZNF547Q8IVP9 402 aa9.21□□□□□ -0.94
BRCA1-226ENST00000591534 PLD5Q8N7P1 536 aa9.21□□□□□ -0.94
BRCA1-226ENST00000591534 CPT1CQ8TCG5 803 aa9.21□□□□□ -0.94
BRCA1-226ENST00000591534 ACTRT1Q8TDG2 376 aa9.21□□□□□ -0.94
BRCA1-226ENST00000591534 EID2BQ96D98 161 aa9.21□□□□□ -0.94
BRCA1-226ENST00000591534 HES6Q96HZ4 224 aa9.21□□□□□ -0.94
BRCA1-226ENST00000591534 SLC25A23Q9BV35 468 aa9.21□□□□□ -0.94
BRCA1-226ENST00000591534 SLC29A3Q9BZD2 475 aa9.21□□□□□ -0.94
BRCA1-226ENST00000591534 L2HGDHQ9H9P8 463 aa9.21□□□□□ -0.94
BRCA1-226ENST00000591534 GLOD4Q9HC38 313 aa9.21□□□□□ -0.94
BRCA1-226ENST00000591534 SYTL2Q9HCH5 934 aa9.21□□□□□ -0.94
BRCA1-226ENST00000591534 FGF21Q9NSA1 209 aa9.21□□□□□ -0.94
BRCA1-226ENST00000591534 HRASLS2Q9NWW9 162 aa9.21□□□□□ -0.94
BRCA1-226ENST00000591534 FAM153AQ9UHL3 310 aa9.21□□□□□ -0.94
BRCA1-226ENST00000591534 ACSL5Q9ULC5 683 aa9.21□□□□□ -0.94
BRCA1-226ENST00000591534 FARSAQ9Y285 508 aaKnown RBP9.21□□□□□ -0.94
BRCA1-226ENST00000591534 EPB41L3Q9Y2J2 1087 aaPredicted RBP9.21□□□□□ -0.94
BRCA1-226ENST00000591534 ZNF451Q9Y4E5 1061 aa9.21□□□□□ -0.94
BRCA1-226ENST00000591534 PCDHA3Q9Y5H8 950 aa9.21□□□□□ -0.94
BRCA1-226ENST00000591534 COLEC10Q9Y6Z7 277 aa9.21□□□□□ -0.94
BRCA1-226ENST00000591534 IGHV5-51A0A0C4DH38 117 aa9.2□□□□□ -0.94
BRCA1-226ENST00000591534 GLYATL1P3A0A0U1RQE8 302 aa9.2□□□□□ -0.94
BRCA1-226ENST00000591534 A0A0U1RQJ8 604 aa9.2□□□□□ -0.94
BRCA1-226ENST00000591534 PGRMC1O00264 195 aaKnown RBP9.2□□□□□ -0.94
BRCA1-226ENST00000591534 MATN2O00339 956 aa9.2□□□□□ -0.94
BRCA1-226ENST00000591534 KLHL41O60662 606 aa9.2□□□□□ -0.94
BRCA1-226ENST00000591534 DPM1O60762 260 aa9.2□□□□□ -0.94
BRCA1-226ENST00000591534 SCRG1O75711 98 aa9.2□□□□□ -0.94
BRCA1-226ENST00000591534 TJP3O95049 919 aa9.2□□□□□ -0.94
BRCA1-226ENST00000591534 ZBTB11O95625 1053 aaPredicted RBP9.2□□□□□ -0.94
BRCA1-226ENST00000591534 ARAFP10398 606 aa9.2□□□□□ -0.94
BRCA1-226ENST00000591534 RALBP11234 206 aa9.2□□□□□ -0.94
BRCA1-226ENST00000591534 MSH3P20585 1137 aa9.2□□□□□ -0.94
BRCA1-226ENST00000591534 NDUFS1P28331 727 aa9.2□□□□□ -0.94
BRCA1-226ENST00000591534 ADH6P28332 368 aa9.2□□□□□ -0.94
BRCA1-226ENST00000591534 AKT1P31749 480 aa9.2□□□□□ -0.94
BRCA1-226ENST00000591534 MARCKSL1P49006 195 aa9.2□□□□□ -0.94
BRCA1-226ENST00000591534 ST13P50502 369 aaKnown RBP9.2□□□□□ -0.94
BRCA1-226ENST00000591534 RRADP55042 308 aa9.2□□□□□ -0.94
BRCA1-226ENST00000591534 ADCY2Q08462 1091 aa9.2□□□□□ -0.94
BRCA1-226ENST00000591534 CHRNA6Q15825 494 aa9.2□□□□□ -0.94
BRCA1-226ENST00000591534 RPE65Q16518 533 aa9.2□□□□□ -0.94
BRCA1-226ENST00000591534 IZUMO3Q5VZ72 239 aa9.2□□□□□ -0.94
BRCA1-226ENST00000591534 ZNF449Q6P9G9 518 aa9.2□□□□□ -0.94
BRCA1-226ENST00000591534 TMEM220Q6QAJ8 160 aa9.2□□□□□ -0.94
BRCA1-226ENST00000591534 GLT6D1Q7Z4J2 308 aa9.2□□□□□ -0.94
BRCA1-226ENST00000591534 MAATS1Q7Z4T9 603 aa9.2□□□□□ -0.94
BRCA1-226ENST00000591534 KATNAL2Q8IYT4 538 aa9.2□□□□□ -0.94
BRCA1-226ENST00000591534 DDHD1Q8NEL9 900 aa9.2□□□□□ -0.94
BRCA1-226ENST00000591534 TFB1MQ8WVM0 346 aaKnown RBP9.2□□□□□ -0.94
BRCA1-226ENST00000591534 CPT1BQ92523 772 aa9.2□□□□□ -0.94
BRCA1-226ENST00000591534 MR1Q95460 341 aa9.2□□□□□ -0.94
BRCA1-226ENST00000591534 TADA1Q96BN2 335 aa9.2□□□□□ -0.94
BRCA1-226ENST00000591534 LRRC45Q96CN5 670 aa9.2□□□□□ -0.94
BRCA1-226ENST00000591534 HAUS1Q96CS2 278 aa9.2□□□□□ -0.94
BRCA1-226ENST00000591534 TEKT5Q96M29 485 aa9.2□□□□□ -0.94
BRCA1-226ENST00000591534 OSBPL9Q96SU4 736 aa9.2□□□□□ -0.94
BRCA1-226ENST00000591534 VAT1Q99536 393 aa9.2□□□□□ -0.94
BRCA1-226ENST00000591534 CEP41Q9BYV8 373 aa9.2□□□□□ -0.94
BRCA1-226ENST00000591534 BHLHE41Q9C0J9 482 aaPredicted RBP9.2□□□□□ -0.94
BRCA1-226ENST00000591534 SLC7A5P2Q9GIP4 190 aa9.2□□□□□ -0.94
BRCA1-226ENST00000591534 ING2Q9H160 280 aa9.2□□□□□ -0.94
BRCA1-226ENST00000591534 IL26Q9NPH9 171 aa9.2□□□□□ -0.94
BRCA1-226ENST00000591534 IMP3Q9NV31 184 aaKnown RBP9.2□□□□□ -0.94
BRCA1-226ENST00000591534 SOHLH2Q9NX45 425 aa9.2□□□□□ -0.94
BRCA1-226ENST00000591534 HEBP2Q9Y5Z4 205 aa9.2□□□□□ -0.94
BRCA1-226ENST00000591534 DUSP10Q9Y6W6 482 aa9.2□□□□□ -0.94
BRCA1-226ENST00000591534 LRRK2Q5S007 2527 aa9.2□□□□□ -0.94
BRCA1-226ENST00000591534 OR5K3A6NET4 321 aa9.19□□□□□ -0.94
BRCA1-226ENST00000591534 MT-CYBP00156 380 aaPredicted RBP9.19□□□□□ -0.94
BRCA1-226ENST00000591534 KRT1P04264 644 aa9.19□□□□□ -0.94
BRCA1-226ENST00000591534 CD63P08962 238 aa9.19□□□□□ -0.94
BRCA1-226ENST00000591534 FURINP09958 794 aa9.19□□□□□ -0.94
BRCA1-226ENST00000591534 RAB40ALP0C0E4 278 aa9.19□□□□□ -0.94
BRCA1-226ENST00000591534 SLC35G4P0C7Q5 338 aa9.19□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 41.5 ms