RNA–Protein interactions for RNA: ENST00000591383.1

VPS4B-205, Transcript of vacuolar protein sorting 4 homolog B, humanhuman

TSL 5

Gene VPS4B, Length 701 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS4B-205ENST00000591383 UNC5BQ8IZJ1 945 aa6.3□□□□□ -1.4
VPS4B-205ENST00000591383 PNPLA1Q8N8W4 532 aa6.3□□□□□ -1.4
VPS4B-205ENST00000591383 OR4L1Q8NH43 312 aa6.3□□□□□ -1.4
VPS4B-205ENST00000591383 SETD7Q8WTS6 366 aaKnown RBP6.3□□□□□ -1.4
VPS4B-205ENST00000591383 PYROXD1Q8WU10 500 aa6.3□□□□□ -1.4
VPS4B-205ENST00000591383 PEX13Q92968 403 aa6.3□□□□□ -1.4
VPS4B-205ENST00000591383 ART4Q93070 314 aa6.3□□□□□ -1.4
VPS4B-205ENST00000591383 CDKN2AIPNLQ96HQ2 116 aa6.3□□□□□ -1.4
VPS4B-205ENST00000591383 SIGLEC10Q96LC7 697 aa6.3□□□□□ -1.4
VPS4B-205ENST00000591383 FCRL3Q96P31 734 aaPredicted RBP6.3□□□□□ -1.4
VPS4B-205ENST00000591383 TTC1Q99614 292 aa6.3□□□□□ -1.4
VPS4B-205ENST00000591383 EBNA1BP2Q99848 306 aaKnown RBP6.3□□□□□ -1.4
VPS4B-205ENST00000591383 FAM167BQ9BTA0 163 aa6.3□□□□□ -1.4
VPS4B-205ENST00000591383 NAT9Q9BTE0 207 aa6.3□□□□□ -1.4
VPS4B-205ENST00000591383 BOCQ9BWV1 1114 aa6.3□□□□□ -1.4
VPS4B-205ENST00000591383 CLPBQ9H078 707 aa6.3□□□□□ -1.4
VPS4B-205ENST00000591383 TMEM168Q9H0V1 697 aa6.3□□□□□ -1.4
VPS4B-205ENST00000591383 SEMA6CQ9H3T2 930 aa6.3□□□□□ -1.4
VPS4B-205ENST00000591383 VPS37BQ9H9H4 285 aa6.3□□□□□ -1.4
VPS4B-205ENST00000591383 TREX1Q9NSU2 369 aa6.3□□□□□ -1.4
VPS4B-205ENST00000591383 UCKL1Q9NWZ5 548 aa6.3□□□□□ -1.4
VPS4B-205ENST00000591383 GFOD1Q9NXC2 390 aa6.3□□□□□ -1.4
VPS4B-205ENST00000591383 VPS18Q9P253 973 aa6.3□□□□□ -1.4
VPS4B-205ENST00000591383 ATXN10Q9UBB4 475 aa6.3□□□□□ -1.4
VPS4B-205ENST00000591383 SPASTQ9UBP0 616 aa6.3□□□□□ -1.4
VPS4B-205ENST00000591383 ZNHIT2Q9UHR6 403 aa6.3□□□□□ -1.4
VPS4B-205ENST00000591383 TMPRSS11EQ9UL52 423 aa6.3□□□□□ -1.4
VPS4B-205ENST00000591383 CNOT6Q9ULM6 557 aaKnown RBP6.3□□□□□ -1.4
VPS4B-205ENST00000591383 NFU1Q9UMS0 254 aa6.3□□□□□ -1.4
VPS4B-205ENST00000591383 KCNK6Q9Y257 313 aa6.3□□□□□ -1.4
VPS4B-205ENST00000591383 SLC17A4Q9Y2C5 497 aa6.3□□□□□ -1.4
VPS4B-205ENST00000591383 DNAJC16Q9Y2G8 782 aa6.3□□□□□ -1.4
VPS4B-205ENST00000591383 GPR55Q9Y2T6 319 aaPredicted RBP6.3□□□□□ -1.4
VPS4B-205ENST00000591383 GOLGA4Q13439 2230 aaKnown RBP6.3□□□□□ -1.4
VPS4B-205ENST00000591383 TRBV5-4A0A0C4DH59 114 aa6.29□□□□□ -1.4
VPS4B-205ENST00000591383 PDZK1P1A8MUH7 402 aa6.29□□□□□ -1.4
VPS4B-205ENST00000591383 PFDN6O15212 129 aa6.29□□□□□ -1.4
VPS4B-205ENST00000591383 TP73O15350 636 aa6.29□□□□□ -1.4
VPS4B-205ENST00000591383 EIF3HO15372 352 aaKnown RBP eCLIP6.29□□□□□ -1.4
VPS4B-205ENST00000591383 GRID2O43424 1007 aa6.29□□□□□ -1.4
VPS4B-205ENST00000591383 VEGFDO43915 354 aa6.29□□□□□ -1.4
VPS4B-205ENST00000591383 OR1I1O60431 355 aa6.29□□□□□ -1.4
VPS4B-205ENST00000591383 DFNA5O60443 496 aa6.29□□□□□ -1.4
VPS4B-205ENST00000591383 SNX2O60749 519 aa6.29□□□□□ -1.4
VPS4B-205ENST00000591383 NDUFS3O75489 264 aa6.29□□□□□ -1.4
VPS4B-205ENST00000591383 PIAS2O75928 621 aa6.29□□□□□ -1.4
VPS4B-205ENST00000591383 USP1O94782 785 aa6.29□□□□□ -1.4
VPS4B-205ENST00000591383 TNFP01375 233 aa6.29□□□□□ -1.4
VPS4B-205ENST00000591383 ANXA6P08133 673 aa6.29□□□□□ -1.4
VPS4B-205ENST00000591383 HOXC4P09017 264 aaPredicted RBP6.29□□□□□ -1.4
VPS4B-205ENST00000591383 ERVK-10P10266 1014 aa6.29□□□□□ -1.4
VPS4B-205ENST00000591383 VCLP18206 1134 aa6.29□□□□□ -1.4
VPS4B-205ENST00000591383 ITGB6P18564 788 aa6.29□□□□□ -1.4
VPS4B-205ENST00000591383 DGKAP23743 735 aa6.29□□□□□ -1.4
VPS4B-205ENST00000591383 AK4P27144 223 aaPredicted RBP6.29□□□□□ -1.4
VPS4B-205ENST00000591383 ACTR1BP42025 376 aa6.29□□□□□ -1.4
VPS4B-205ENST00000591383 GRK6P43250 576 aa6.29□□□□□ -1.4
VPS4B-205ENST00000591383 ABCG1P45844 678 aa6.29□□□□□ -1.4
VPS4B-205ENST00000591383 CARSP49589 748 aaKnown RBP6.29□□□□□ -1.4
VPS4B-205ENST00000591383 PPM1FP49593 454 aaPredicted RBP6.29□□□□□ -1.4
VPS4B-205ENST00000591383 TTPAP49638 278 aa6.29□□□□□ -1.4
VPS4B-205ENST00000591383 NEK2P51955 445 aa6.29□□□□□ -1.4
VPS4B-205ENST00000591383 CTSCP53634 463 aa6.29□□□□□ -1.4
VPS4B-205ENST00000591383 ACTR1AP61163 376 aa6.29□□□□□ -1.4
VPS4B-205ENST00000591383 MPP1Q00013 466 aa6.29□□□□□ -1.4
VPS4B-205ENST00000591383 B4GALNT1Q00973 533 aa6.29□□□□□ -1.4
VPS4B-205ENST00000591383 DNAH14Q0VDD8 3507 aa6.29□□□□□ -1.4
VPS4B-205ENST00000591383 BNIP3Q12983 259 aa6.29□□□□□ -1.4
VPS4B-205ENST00000591383 BIRC2Q13490 618 aa6.29□□□□□ -1.4
VPS4B-205ENST00000591383 BOP1Q14137 746 aaKnown RBP6.29□□□□□ -1.4
VPS4B-205ENST00000591383 SEMA3AQ14563 771 aa6.29□□□□□ -1.4
VPS4B-205ENST00000591383 ITIH4Q14624 930 aa6.29□□□□□ -1.4
VPS4B-205ENST00000591383 ELOCQ15369 112 aa6.29□□□□□ -1.4
VPS4B-205ENST00000591383 SHBQ15464 509 aa6.29□□□□□ -1.4
VPS4B-205ENST00000591383 CCDC157Q569K6 752 aa6.29□□□□□ -1.4
VPS4B-205ENST00000591383 HSP90AA5PQ58FG0 334 aa6.29□□□□□ -1.4
VPS4B-205ENST00000591383 ARMC3Q5W041 872 aa6.29□□□□□ -1.4
VPS4B-205ENST00000591383 STEAP4Q687X5 459 aa6.29□□□□□ -1.4
VPS4B-205ENST00000591383 PTRHD1Q6GMV3 140 aaKnown RBP6.29□□□□□ -1.4
VPS4B-205ENST00000591383 NEPROQ6NW34 567 aa6.29□□□□□ -1.4
VPS4B-205ENST00000591383 TRMT10BQ6PF06 316 aaKnown RBP6.29□□□□□ -1.4
VPS4B-205ENST00000591383 LINC00114Q6XXX2 140 aa6.29□□□□□ -1.4
VPS4B-205ENST00000591383 CEP128Q6ZU80 1094 aa6.29□□□□□ -1.4
VPS4B-205ENST00000591383 USP53Q70EK8 1073 aa6.29□□□□□ -1.4
VPS4B-205ENST00000591383 UBE2R2Q712K3 238 aaPredicted RBP6.29□□□□□ -1.4
VPS4B-205ENST00000591383 CHST15Q7LFX5 561 aaPredicted RBP6.29□□□□□ -1.4
VPS4B-205ENST00000591383 SDCCAG8Q86SQ7 713 aaPredicted RBP6.29□□□□□ -1.4
VPS4B-205ENST00000591383 FSTL5Q8N475 847 aaPredicted RBP6.29□□□□□ -1.4
VPS4B-205ENST00000591383 CLDN19Q8N6F1 224 aa6.29□□□□□ -1.4
VPS4B-205ENST00000591383 EID2Q8N6I1 236 aa6.29□□□□□ -1.4
VPS4B-205ENST00000591383 BEND7Q8N7W2 519 aaPredicted RBP6.29□□□□□ -1.4
VPS4B-205ENST00000591383 RASGEF1AQ8N9B8 481 aa6.29□□□□□ -1.4
VPS4B-205ENST00000591383 KYQ8NBH2 561 aa6.29□□□□□ -1.4
VPS4B-205ENST00000591383 CCL4L1Q8NHW4 92 aa6.29□□□□□ -1.4
VPS4B-205ENST00000591383 GSDMBQ8TAX9 411 aa6.29□□□□□ -1.4
VPS4B-205ENST00000591383 NETO1Q8TDF5 533 aa6.29□□□□□ -1.4
VPS4B-205ENST00000591383 RELTQ969Z4 430 aa6.29□□□□□ -1.4
VPS4B-205ENST00000591383 FAM136AQ96C01 138 aa6.29□□□□□ -1.4
VPS4B-205ENST00000591383 LRRC39Q96DD0 335 aa6.29□□□□□ -1.4
VPS4B-205ENST00000591383 CERS2Q96G23 380 aa6.29□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms