RNA–Protein interactions for RNA: ENST00000591315.5

VMP1-211, Transcript of vacuole membrane protein 1, humanhuman

TSL 3

Gene VMP1, Length 800 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1-211ENST00000591315 PKMP14618 531 aaKnown RBP11.2□□□□□ -0.62
VMP1-211ENST00000591315 CSTF2P33240 577 aaKnown RBP eCLIP11.2□□□□□ -0.62
VMP1-211ENST00000591315 PPARGP37231 505 aaPredicted RBP11.2□□□□□ -0.62
VMP1-211ENST00000591315 CARSP49589 748 aaKnown RBP11.2□□□□□ -0.62
VMP1-211ENST00000591315 ARL4CP56559 192 aa11.2□□□□□ -0.62
VMP1-211ENST00000591315 TIAL1Q01085 375 aaKnown RBP eCLIP11.2□□□□□ -0.62
VMP1-211ENST00000591315 GSTM4Q03013 218 aa11.2□□□□□ -0.62
VMP1-211ENST00000591315 TRA2AQ13595 282 aaKnown RBP eCLIP11.2□□□□□ -0.62
VMP1-211ENST00000591315 KCNAB1Q14722 419 aa11.2□□□□□ -0.62
VMP1-211ENST00000591315 TGIF1Q15583 401 aa11.2□□□□□ -0.62
VMP1-211ENST00000591315 CCSMST1Q4G0I0 132 aa11.2□□□□□ -0.62
VMP1-211ENST00000591315 ACSBG2Q5FVE4 666 aa11.2□□□□□ -0.62
VMP1-211ENST00000591315 CACHD1Q5VU97 1274 aa11.2□□□□□ -0.62
VMP1-211ENST00000591315 ARMC3Q5W041 872 aa11.2□□□□□ -0.62
VMP1-211ENST00000591315 STEAP4Q687X5 459 aa11.2□□□□□ -0.62
VMP1-211ENST00000591315 ZDHHC24Q6UX98 284 aa11.2□□□□□ -0.62
VMP1-211ENST00000591315 CAPN12Q6ZSI9 719 aa11.2□□□□□ -0.62
VMP1-211ENST00000591315 MAATS1Q7Z4T9 603 aa11.2□□□□□ -0.62
VMP1-211ENST00000591315 LRRC6Q86X45 466 aa11.2□□□□□ -0.62
VMP1-211ENST00000591315 ZFAND4Q86XD8 727 aa11.2□□□□□ -0.62
VMP1-211ENST00000591315 PLXDC1Q8IUK5 500 aa11.2□□□□□ -0.62
VMP1-211ENST00000591315 PDIK1LQ8N165 341 aa11.2□□□□□ -0.62
VMP1-211ENST00000591315 C2orf73Q8N5S3 287 aaPredicted RBP11.2□□□□□ -0.62
VMP1-211ENST00000591315 AGBL5Q8NDL9 886 aa11.2□□□□□ -0.62
VMP1-211ENST00000591315 FBXO36Q8NEA4 188 aa11.2□□□□□ -0.62
VMP1-211ENST00000591315 ACVR1CQ8NER5 493 aa11.2□□□□□ -0.62
VMP1-211ENST00000591315 HNRNPLLQ8WVV9 542 aaKnown RBP11.2□□□□□ -0.62
VMP1-211ENST00000591315 LCN9Q8WX39 176 aa11.2□□□□□ -0.62
VMP1-211ENST00000591315 ART4Q93070 314 aa11.2□□□□□ -0.62
VMP1-211ENST00000591315 TMEM159Q96B96 161 aa11.2□□□□□ -0.62
VMP1-211ENST00000591315 ZNF578Q96N58 590 aaPredicted RBP11.2□□□□□ -0.62
VMP1-211ENST00000591315 IL17FQ96PD4 163 aa11.2□□□□□ -0.62
VMP1-211ENST00000591315 NDNQ99608 321 aa11.2□□□□□ -0.62
VMP1-211ENST00000591315 MAP3K3Q99759 626 aa11.2□□□□□ -0.62
VMP1-211ENST00000591315 CMKLR1Q99788 373 aa11.2□□□□□ -0.62
VMP1-211ENST00000591315 KLHL25Q9H0H3 589 aa11.2□□□□□ -0.62
VMP1-211ENST00000591315 EPB41L1Q9H4G0 881 aa11.2□□□□□ -0.62
VMP1-211ENST00000591315 ZC3H7BQ9UGR2 993 aaKnown RBP11.2□□□□□ -0.62
VMP1-211ENST00000591315 B3GALT1Q9Y5Z6 326 aa11.2□□□□□ -0.62
VMP1-211ENST00000591315 MRFAP1Q9Y605 127 aa11.2□□□□□ -0.62
VMP1-211ENST00000591315 COLEC10Q9Y6Z7 277 aa11.2□□□□□ -0.62
VMP1-211ENST00000591315 E7ESA3 106 aa11.19□□□□□ -0.62
VMP1-211ENST00000591315 RASSF9O75901 435 aa11.19□□□□□ -0.62
VMP1-211ENST00000591315 ESR1P03372 595 aa11.19□□□□□ -0.62
VMP1-211ENST00000591315 APOA4P06727 396 aa11.19□□□□□ -0.62
VMP1-211ENST00000591315 ITGA2BP08514 1039 aa11.19□□□□□ -0.62
VMP1-211ENST00000591315 CHRM3P20309 590 aa11.19□□□□□ -0.62
VMP1-211ENST00000591315 BDKRB1P46663 353 aa11.19□□□□□ -0.62
VMP1-211ENST00000591315 KPNA2P52292 529 aaKnown RBP11.19□□□□□ -0.62
VMP1-211ENST00000591315 PLTPP55058 493 aa11.19□□□□□ -0.62
VMP1-211ENST00000591315 EIF3IQ13347 325 aaKnown RBP11.19□□□□□ -0.62
VMP1-211ENST00000591315 CUL1Q13616 776 aa11.19□□□□□ -0.62
VMP1-211ENST00000591315 COL9A2Q14055 689 aaPredicted RBP11.19□□□□□ -0.62
VMP1-211ENST00000591315 GRB7Q14451 532 aa11.19□□□□□ -0.62
VMP1-211ENST00000591315 WHAMMP3Q1A5X7 153 aa11.19□□□□□ -0.62
VMP1-211ENST00000591315 SPANXN3Q5MJ09 141 aa11.19□□□□□ -0.62
VMP1-211ENST00000591315 RBM20Q5T481 1227 aaKnown RBP11.19□□□□□ -0.62
VMP1-211ENST00000591315 TEDDM1Q5T9Z0 273 aa11.19□□□□□ -0.62
VMP1-211ENST00000591315 RNF187Q5TA31 235 aaPredicted RBP11.19□□□□□ -0.62
VMP1-211ENST00000591315 ANKS6Q68DC2 871 aa11.19□□□□□ -0.62
VMP1-211ENST00000591315 ZNF449Q6P9G9 518 aa11.19□□□□□ -0.62
VMP1-211ENST00000591315 IGF2-ASQ6U949 168 aa11.19□□□□□ -0.62
VMP1-211ENST00000591315 CLEC14AQ86T13 490 aa11.19□□□□□ -0.62
VMP1-211ENST00000591315 TRIM73Q86UV7 250 aa11.19□□□□□ -0.62
VMP1-211ENST00000591315 FAM20CQ8IXL6 584 aa11.19□□□□□ -0.62
VMP1-211ENST00000591315 ADGRF3Q8IZF5 1079 aa11.19□□□□□ -0.62
VMP1-211ENST00000591315 SIDT2Q8NBJ9 832 aaKnown RBP11.19□□□□□ -0.62
VMP1-211ENST00000591315 C2CD4AQ8NCU7 369 aaPredicted RBP11.19□□□□□ -0.62
VMP1-211ENST00000591315 SNIP1Q8TAD8 396 aaKnown RBP11.19□□□□□ -0.62
VMP1-211ENST00000591315 ASZ1Q8WWH4 475 aa11.19□□□□□ -0.62
VMP1-211ENST00000591315 TRIM44Q96DX7 344 aaPredicted RBP11.19□□□□□ -0.62
VMP1-211ENST00000591315 CERS2Q96G23 380 aa11.19□□□□□ -0.62
VMP1-211ENST00000591315 ELMO2Q96JJ3 720 aa11.19□□□□□ -0.62
VMP1-211ENST00000591315 DPYSL5Q9BPU6 564 aa11.19□□□□□ -0.62
VMP1-211ENST00000591315 SRMSQ9H3Y6 488 aa11.19□□□□□ -0.62
VMP1-211ENST00000591315 MVB12BQ9H7P6 319 aa11.19□□□□□ -0.62
VMP1-211ENST00000591315 SAYSD1Q9NPB0 183 aa11.19□□□□□ -0.62
VMP1-211ENST00000591315 SMYD2Q9NRG4 433 aa11.19□□□□□ -0.62
VMP1-211ENST00000591315 THSD1Q9NS62 852 aa11.19□□□□□ -0.62
VMP1-211ENST00000591315 INTS10Q9NVR2 710 aaKnown RBP11.19□□□□□ -0.62
VMP1-211ENST00000591315 SIDT1Q9NXL6 827 aaKnown RBP11.19□□□□□ -0.62
VMP1-211ENST00000591315 SLC39A1Q9NY26 324 aa11.19□□□□□ -0.62
VMP1-211ENST00000591315 SPHK1Q9NYA1 384 aa11.19□□□□□ -0.62
VMP1-211ENST00000591315 WHRNQ9P202 907 aa11.19□□□□□ -0.62
VMP1-211ENST00000591315 EPHA6Q9UF33 1036 aa11.19□□□□□ -0.62
VMP1-211ENST00000591315 RALYQ9UKM9 306 aaKnown RBP11.19□□□□□ -0.62
VMP1-211ENST00000591315 HEBP2Q9Y5Z4 205 aa11.19□□□□□ -0.62
VMP1-211ENST00000591315 PSAT1Q9Y617 370 aa11.19□□□□□ -0.62
VMP1-211ENST00000591315 CACNA1GO43497 2377 aa11.19□□□□□ -0.62
VMP1-211ENST00000591315 GSAPA4D1B5 854 aa11.18□□□□□ -0.62
VMP1-211ENST00000591315 AHSGP02765 367 aa11.18□□□□□ -0.62
VMP1-211ENST00000591315 PVRP15151 417 aa11.18□□□□□ -0.62
VMP1-211ENST00000591315 NDUFS1P28331 727 aa11.18□□□□□ -0.62
VMP1-211ENST00000591315 PEBP1P30086 187 aaKnown RBP11.18□□□□□ -0.62
VMP1-211ENST00000591315 CLCN7P51798 805 aa11.18□□□□□ -0.62
VMP1-211ENST00000591315 CDKN2DP55273 166 aa11.18□□□□□ -0.62
VMP1-211ENST00000591315 ERVPABLB-1P60509 514 aa11.18□□□□□ -0.62
VMP1-211ENST00000591315 CKAP4Q07065 602 aaKnown RBP11.18□□□□□ -0.62
VMP1-211ENST00000591315 GBX1Q14549 363 aa11.18□□□□□ -0.62
VMP1-211ENST00000591315 DNTTIP2Q5QJE6 756 aaKnown RBP11.18□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 45.7 ms