RNA–Protein interactions for RNA: ENST00000590630.5

LIG3-213, Transcript of DNA ligase 3, humanhuman

TSL 5

Gene LIG3, Length 904 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG3-213ENST00000590630 CFAP36Q96G28 342 aa11.58□□□□□ -0.56
LIG3-213ENST00000590630 TGM7Q96PF1 710 aa11.58□□□□□ -0.56
LIG3-213ENST00000590630 CD180Q99467 661 aa11.58□□□□□ -0.56
LIG3-213ENST00000590630 HGH1Q9BTY7 390 aa11.58□□□□□ -0.56
LIG3-213ENST00000590630 PHACTR1Q9C0D0 580 aa11.58□□□□□ -0.56
LIG3-213ENST00000590630 B3GNT4Q9C0J1 378 aa11.58□□□□□ -0.56
LIG3-213ENST00000590630 SRMSQ9H3Y6 488 aa11.58□□□□□ -0.56
LIG3-213ENST00000590630 PLAC1Q9HBJ0 212 aa11.58□□□□□ -0.56
LIG3-213ENST00000590630 FBXO6Q9NRD1 293 aaPredicted RBP11.58□□□□□ -0.56
LIG3-213ENST00000590630 LATS2Q9NRM7 1088 aa11.58□□□□□ -0.56
LIG3-213ENST00000590630 IARS2Q9NSE4 1012 aaKnown RBP11.58□□□□□ -0.56
LIG3-213ENST00000590630 PISDQ9UG56 409 aa11.58□□□□□ -0.56
LIG3-213ENST00000590630 KLHL3Q9UH77 587 aa11.58□□□□□ -0.56
LIG3-213ENST00000590630 PCDHGA7Q9Y5G6 932 aa11.58□□□□□ -0.56
LIG3-213ENST00000590630 CTAGE15A4D2H0 777 aa11.57□□□□□ -0.56
LIG3-213ENST00000590630 OR6C74A6NCV1 312 aa11.57□□□□□ -0.56
LIG3-213ENST00000590630 A8MU76 341 aa11.57□□□□□ -0.56
LIG3-213ENST00000590630 B4E171 279 aa11.57□□□□□ -0.56
LIG3-213ENST00000590630 TAF4O00268 1085 aa11.57□□□□□ -0.56
LIG3-213ENST00000590630 NVLO15381 856 aaKnown RBP11.57□□□□□ -0.56
LIG3-213ENST00000590630 RASSF9O75901 435 aa11.57□□□□□ -0.56
LIG3-213ENST00000590630 CTAGE8P0CG41 777 aa11.57□□□□□ -0.56
LIG3-213ENST00000590630 ITIH1P19827 911 aa11.57□□□□□ -0.56
LIG3-213ENST00000590630 CHRM3P20309 590 aa11.57□□□□□ -0.56
LIG3-213ENST00000590630 TSPAN7P41732 249 aa11.57□□□□□ -0.56
LIG3-213ENST00000590630 PCBP4P57723 403 aaKnown RBP11.57□□□□□ -0.56
LIG3-213ENST00000590630 PRKAA1Q13131 559 aa11.57□□□□□ -0.56
LIG3-213ENST00000590630 FASTKD3Q14CZ7 662 aaKnown RBP11.57□□□□□ -0.56
LIG3-213ENST00000590630 TMEM164Q5U3C3 297 aa11.57□□□□□ -0.56
LIG3-213ENST00000590630 ARMC6Q6NXE6 501 aa11.57□□□□□ -0.56
LIG3-213ENST00000590630 CTAGE6Q86UF2 777 aa11.57□□□□□ -0.56
LIG3-213ENST00000590630 ANKMY2Q8IV38 441 aa11.57□□□□□ -0.56
LIG3-213ENST00000590630 VRK3Q8IV63 474 aa11.57□□□□□ -0.56
LIG3-213ENST00000590630 CTAGE4Q8IX94 777 aa11.57□□□□□ -0.56
LIG3-213ENST00000590630 ZBED8Q8IZ13 594 aa11.57□□□□□ -0.56
LIG3-213ENST00000590630 CARFQ8N187 725 aa11.57□□□□□ -0.56
LIG3-213ENST00000590630 MMGT1Q8N4V1 131 aa11.57□□□□□ -0.56
LIG3-213ENST00000590630 FBXO36Q8NEA4 188 aa11.57□□□□□ -0.56
LIG3-213ENST00000590630 OR4E2Q8NGC2 313 aa11.57□□□□□ -0.56
LIG3-213ENST00000590630 OR52E1Q8NGJ3 308 aa11.57□□□□□ -0.56
LIG3-213ENST00000590630 OR5AR1Q8NGP9 310 aa11.57□□□□□ -0.56
LIG3-213ENST00000590630 JPH3Q8WXH2 748 aaPredicted RBP11.57□□□□□ -0.56
LIG3-213ENST00000590630 SEC14L1Q92503 715 aa11.57□□□□□ -0.56
LIG3-213ENST00000590630 ART4Q93070 314 aa11.57□□□□□ -0.56
LIG3-213ENST00000590630 LRRC1Q9BTT6 524 aa11.57□□□□□ -0.56
LIG3-213ENST00000590630 ZNF768Q9H5H4 540 aaKnown RBP11.57□□□□□ -0.56
LIG3-213ENST00000590630 PPANQ9NQ55 473 aaKnown RBP11.57□□□□□ -0.56
LIG3-213ENST00000590630 HRASLS2Q9NWW9 162 aa11.57□□□□□ -0.56
LIG3-213ENST00000590630 KLHL42Q9P2K6 505 aa11.57□□□□□ -0.56
LIG3-213ENST00000590630 SNRNP200O75643 2136 aaKnown RBP11.57□□□□□ -0.56
LIG3-213ENST00000590630 TLCD2A6NGC4 264 aa11.56□□□□□ -0.56
LIG3-213ENST00000590630 SRRM3A6NNA2 597 aaPredicted RBP11.56□□□□□ -0.56
LIG3-213ENST00000590630 HAUS5O94927 633 aa11.56□□□□□ -0.56
LIG3-213ENST00000590630 FGF3P11487 239 aaPredicted RBP11.56□□□□□ -0.56
LIG3-213ENST00000590630 CCL4P13236 92 aa11.56□□□□□ -0.56
LIG3-213ENST00000590630 SHMT2P34897 504 aa11.56□□□□□ -0.56
LIG3-213ENST00000590630 CLCN7P51798 805 aa11.56□□□□□ -0.56
LIG3-213ENST00000590630 PLTPP55058 493 aa11.56□□□□□ -0.56
LIG3-213ENST00000590630 RAB15P59190 212 aa11.56□□□□□ -0.56
LIG3-213ENST00000590630 MPP1Q00013 466 aa11.56□□□□□ -0.56
LIG3-213ENST00000590630 PRKG2Q13237 762 aa11.56□□□□□ -0.56
LIG3-213ENST00000590630 GBX1Q14549 363 aa11.56□□□□□ -0.56
LIG3-213ENST00000590630 TTLL9Q3SXZ7 439 aa11.56□□□□□ -0.56
LIG3-213ENST00000590630 SDK2Q58EX2 2172 aa11.56□□□□□ -0.56
LIG3-213ENST00000590630 DNTTIP2Q5QJE6 756 aaKnown RBP11.56□□□□□ -0.56
LIG3-213ENST00000590630 TEDDM1Q5T9Z0 273 aa11.56□□□□□ -0.56
LIG3-213ENST00000590630 CACHD1Q5VU97 1274 aa11.56□□□□□ -0.56
LIG3-213ENST00000590630 ZNF549Q6P9A3 640 aa11.56□□□□□ -0.56
LIG3-213ENST00000590630 FAM92BQ6ZTR7 304 aa11.56□□□□□ -0.56
LIG3-213ENST00000590630 AMIGO1Q86WK6 493 aa11.56□□□□□ -0.56
LIG3-213ENST00000590630 FAM129CQ86XR2 697 aa11.56□□□□□ -0.56
LIG3-213ENST00000590630 DCUN1D3Q8IWE4 304 aa11.56□□□□□ -0.56
LIG3-213ENST00000590630 ZBTB2Q8N680 514 aa11.56□□□□□ -0.56
LIG3-213ENST00000590630 BMPERQ8N8U9 685 aa11.56□□□□□ -0.56
LIG3-213ENST00000590630 FBXO25Q8TCJ0 367 aa11.56□□□□□ -0.56
LIG3-213ENST00000590630 PYROXD1Q8WU10 500 aa11.56□□□□□ -0.56
LIG3-213ENST00000590630 SKA2Q8WVK7 121 aaPredicted RBP11.56□□□□□ -0.56
LIG3-213ENST00000590630 UBXN4Q92575 508 aa11.56□□□□□ -0.56
LIG3-213ENST00000590630 FOPNLQ96NB1 174 aa11.56□□□□□ -0.56
LIG3-213ENST00000590630 TAAR9Q96RI9 348 aa11.56□□□□□ -0.56
LIG3-213ENST00000590630 OR6C2Q9NZP2 312 aa11.56□□□□□ -0.56
LIG3-213ENST00000590630 SEMA5BQ9P283 1151 aa11.56□□□□□ -0.56
LIG3-213ENST00000590630 ACSL6Q9UKU0 697 aa11.56□□□□□ -0.56
LIG3-213ENST00000590630 RAXQ9Y2V3 346 aa11.56□□□□□ -0.56
LIG3-213ENST00000590630 PCDHGA3Q9Y5H0 932 aa11.56□□□□□ -0.56
LIG3-213ENST00000590630 PCM1Q15154 2024 aa11.55□□□□□ -0.56
LIG3-213ENST00000590630 EFCAB7A8K855 629 aa11.55□□□□□ -0.56
LIG3-213ENST00000590630 AGRPO00253 132 aa11.55□□□□□ -0.56
LIG3-213ENST00000590630 RRP8O43159 456 aaKnown RBP11.55□□□□□ -0.56
LIG3-213ENST00000590630 TLX3O43711 291 aaPredicted RBP11.55□□□□□ -0.56
LIG3-213ENST00000590630 KIF1CO43896 1103 aaKnown RBP11.55□□□□□ -0.56
LIG3-213ENST00000590630 CD82P27701 267 aa11.55□□□□□ -0.56
LIG3-213ENST00000590630 SLC5A2P31639 672 aa11.55□□□□□ -0.56
LIG3-213ENST00000590630 EIF2S3P41091 472 aaKnown RBP11.55□□□□□ -0.56
LIG3-213ENST00000590630 ETV5P41161 510 aa11.55□□□□□ -0.56
LIG3-213ENST00000590630 CARSP49589 748 aaKnown RBP11.55□□□□□ -0.56
LIG3-213ENST00000590630 MAPK10P53779 464 aa11.55□□□□□ -0.56
LIG3-213ENST00000590630 PPP1CAP62136 330 aa11.55□□□□□ -0.56
LIG3-213ENST00000590630 SLC7A5Q01650 507 aa11.55□□□□□ -0.56
LIG3-213ENST00000590630 MGAT5Q09328 741 aa11.55□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms