RNA–Protein interactions for RNA: ENST00000589823.6

VMP1-210, Transcript of vacuole membrane protein 1, humanhuman

TSL 3

Gene VMP1, Length 580 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1-210ENST00000589823 CKMT2P17540 419 aa13.28□□□□□ -0.28
VMP1-210ENST00000589823 MAP4P27816 1152 aaKnown RBP13.28□□□□□ -0.28
VMP1-210ENST00000589823 CCNFP41002 786 aa13.28□□□□□ -0.28
VMP1-210ENST00000589823 FASLGP48023 281 aa13.28□□□□□ -0.28
VMP1-210ENST00000589823 ATP6V0D1P61421 351 aa13.28□□□□□ -0.28
VMP1-210ENST00000589823 CSHL1Q14406 222 aa13.28□□□□□ -0.28
VMP1-210ENST00000589823 FAM83EQ2M2I3 478 aa13.28□□□□□ -0.28
VMP1-210ENST00000589823 PROX2Q3B8N5 592 aa13.28□□□□□ -0.28
VMP1-210ENST00000589823 DUS1LQ6P1R4 473 aaKnown RBP13.28□□□□□ -0.28
VMP1-210ENST00000589823 UBE2R2Q712K3 238 aaPredicted RBP13.28□□□□□ -0.28
VMP1-210ENST00000589823 CYP4X1Q8N118 509 aa13.28□□□□□ -0.28
VMP1-210ENST00000589823 OR5AR1Q8NGP9 310 aa13.28□□□□□ -0.28
VMP1-210ENST00000589823 OR5K2Q8NHB8 316 aa13.28□□□□□ -0.28
VMP1-210ENST00000589823 ACMSDQ8TDX5 336 aa13.28□□□□□ -0.28
VMP1-210ENST00000589823 ANKRD49Q8WVL7 239 aa13.28□□□□□ -0.28
VMP1-210ENST00000589823 ZFPM2Q8WW38 1151 aa13.28□□□□□ -0.28
VMP1-210ENST00000589823 ASB11Q8WXH4 323 aa13.28□□□□□ -0.28
VMP1-210ENST00000589823 ANKRD7Q92527 254 aa13.28□□□□□ -0.28
VMP1-210ENST00000589823 NAT6Q93015 286 aa13.28□□□□□ -0.28
VMP1-210ENST00000589823 CAMK1GQ96NX5 476 aa13.28□□□□□ -0.28
VMP1-210ENST00000589823 LDHAL6BQ9BYZ2 381 aaPredicted RBP13.28□□□□□ -0.28
VMP1-210ENST00000589823 DERL2Q9GZP9 239 aa13.28□□□□□ -0.28
VMP1-210ENST00000589823 SLC32A1Q9H598 525 aa13.28□□□□□ -0.28
VMP1-210ENST00000589823 SLC40A1Q9NP59 571 aa13.28□□□□□ -0.28
VMP1-210ENST00000589823 EURLQ9NYK6 297 aa13.28□□□□□ -0.28
VMP1-210ENST00000589823 CAMSAP3Q9P1Y5 1249 aaPredicted RBP13.28□□□□□ -0.28
VMP1-210ENST00000589823 LRIT1Q9P2V4 623 aa13.28□□□□□ -0.28
VMP1-210ENST00000589823 POLG2Q9UHN1 485 aa13.28□□□□□ -0.28
VMP1-210ENST00000589823 LGALS13Q9UHV8 139 aa13.28□□□□□ -0.28
VMP1-210ENST00000589823 RUVBL2Q9Y230 463 aaKnown RBP13.28□□□□□ -0.28
VMP1-210ENST00000589823 CPED1A4D0V7 1026 aa13.27□□□□□ -0.29
VMP1-210ENST00000589823 EME2A4GXA9 379 aaPredicted RBP13.27□□□□□ -0.29
VMP1-210ENST00000589823 GOLGA6L10A6NI86 522 aa13.27□□□□□ -0.29
VMP1-210ENST00000589823 BTN3A1O00481 513 aa13.27□□□□□ -0.29
VMP1-210ENST00000589823 SLC16A5O15375 505 aa13.27□□□□□ -0.29
VMP1-210ENST00000589823 ZW10O43264 779 aa13.27□□□□□ -0.29
VMP1-210ENST00000589823 NUDT21O43809 227 aaKnown RBP13.27□□□□□ -0.29
VMP1-210ENST00000589823 ZBTB14O43829 449 aa13.27□□□□□ -0.29
VMP1-210ENST00000589823 PSIP1O75475 530 aaKnown RBP13.27□□□□□ -0.29
VMP1-210ENST00000589823 RFPL1O75677 317 aa13.27□□□□□ -0.29
VMP1-210ENST00000589823 WISP3O95389 354 aaPredicted RBP13.27□□□□□ -0.29
VMP1-210ENST00000589823 C1orf105O95561 183 aa13.27□□□□□ -0.29
VMP1-210ENST00000589823 LTA4HP09960 611 aaKnown RBP13.27□□□□□ -0.29
VMP1-210ENST00000589823 MYF5P13349 255 aa13.27□□□□□ -0.29
VMP1-210ENST00000589823 CYP2A7P20853 494 aa13.27□□□□□ -0.29
VMP1-210ENST00000589823 MAGEA12P43365 314 aa13.27□□□□□ -0.29
VMP1-210ENST00000589823 CSRP3P50461 194 aa13.27□□□□□ -0.29
VMP1-210ENST00000589823 PRKG2Q13237 762 aa13.27□□□□□ -0.29
VMP1-210ENST00000589823 SP140Q13342 867 aa13.27□□□□□ -0.29
VMP1-210ENST00000589823 PPM1JQ5JR12 505 aa13.27□□□□□ -0.29
VMP1-210ENST00000589823 CHCHD2P9Q5T1J5 151 aaPredicted RBP13.27□□□□□ -0.29
VMP1-210ENST00000589823 KLC3Q6P597 504 aa13.27□□□□□ -0.29
VMP1-210ENST00000589823 PIP4P1Q86T03 277 aa13.27□□□□□ -0.29
VMP1-210ENST00000589823 DCUN1D3Q8IWE4 304 aa13.27□□□□□ -0.29
VMP1-210ENST00000589823 SPATA6LQ8N4H0 392 aa13.27□□□□□ -0.29
VMP1-210ENST00000589823 MZB1Q8WU39 189 aa13.27□□□□□ -0.29
VMP1-210ENST00000589823 KCTD4Q8WVF5 259 aa13.27□□□□□ -0.29
VMP1-210ENST00000589823 UBXN10Q96LJ8 280 aa13.27□□□□□ -0.29
VMP1-210ENST00000589823 SLC38A3Q99624 504 aa13.27□□□□□ -0.29
VMP1-210ENST00000589823 HGH1Q9BTY7 390 aa13.27□□□□□ -0.29
VMP1-210ENST00000589823 TRIM54Q9BYV2 358 aa13.27□□□□□ -0.29
VMP1-210ENST00000589823 CENPHQ9H3R5 247 aa13.27□□□□□ -0.29
VMP1-210ENST00000589823 KIR3DX1Q9H7L2 352 aa13.27□□□□□ -0.29
VMP1-210ENST00000589823 NMRAL1Q9HBL8 299 aa13.27□□□□□ -0.29
VMP1-210ENST00000589823 PCMTD2Q9NV79 361 aa13.27□□□□□ -0.29
VMP1-210ENST00000589823 CDV3Q9UKY7 258 aaKnown RBP13.27□□□□□ -0.29
VMP1-210ENST00000589823 TDRKHQ9Y2W6 561 aaKnown RBP13.27□□□□□ -0.29
VMP1-210ENST00000589823 RNF215Q9Y6U7 377 aa13.27□□□□□ -0.29
VMP1-210ENST00000589823 LY6G6EA0A0G2JKS1 128 aa13.26□□□□□ -0.29
VMP1-210ENST00000589823 PRAMEF33A0A0G2JMD5 474 aa13.26□□□□□ -0.29
VMP1-210ENST00000589823 A0A1W2PPM1 405 aa13.26□□□□□ -0.29
VMP1-210ENST00000589823 GFYI3L273 518 aa13.26□□□□□ -0.29
VMP1-210ENST00000589823 PPM1DO15297 605 aa13.26□□□□□ -0.29
VMP1-210ENST00000589823 TNFSF14O43557 240 aa13.26□□□□□ -0.29
VMP1-210ENST00000589823 CBFA2T3O75081 653 aa13.26□□□□□ -0.29
VMP1-210ENST00000589823 KLHL2O95198 593 aa13.26□□□□□ -0.29
VMP1-210ENST00000589823 HIST1H2AGP0C0S8 130 aaPredicted RBP13.26□□□□□ -0.29
VMP1-210ENST00000589823 MYZAPP0CAP1 466 aa13.26□□□□□ -0.29
VMP1-210ENST00000589823 COL6A2P12110 1019 aa13.26□□□□□ -0.29
VMP1-210ENST00000589823 PNLIPP16233 465 aa13.26□□□□□ -0.29
VMP1-210ENST00000589823 HIST1H2ADP20671 130 aa13.26□□□□□ -0.29
VMP1-210ENST00000589823 PLA2G5P39877 138 aa13.26□□□□□ -0.29
VMP1-210ENST00000589823 BDKRB1P46663 353 aa13.26□□□□□ -0.29
VMP1-210ENST00000589823 KPNA2P52292 529 aaKnown RBP13.26□□□□□ -0.29
VMP1-210ENST00000589823 IRF9Q00978 393 aa13.26□□□□□ -0.29
VMP1-210ENST00000589823 GPR18Q14330 331 aa13.26□□□□□ -0.29
VMP1-210ENST00000589823 PLCL1Q15111 1095 aa13.26□□□□□ -0.29
VMP1-210ENST00000589823 TSNAXIP1Q2TAA8 658 aa13.26□□□□□ -0.29
VMP1-210ENST00000589823 RIF1Q5UIP0 2472 aaKnown RBP13.26□□□□□ -0.29
VMP1-210ENST00000589823 GUSBP11Q6P575 273 aa13.26□□□□□ -0.29
VMP1-210ENST00000589823 TMEM26Q6ZUK4 368 aa13.26□□□□□ -0.29
VMP1-210ENST00000589823 EFL1Q7Z2Z2 1120 aaKnown RBP13.26□□□□□ -0.29
VMP1-210ENST00000589823 ADAMTSL2Q86TH1 951 aa13.26□□□□□ -0.29
VMP1-210ENST00000589823 RAB42Q8N4Z0 105 aa13.26□□□□□ -0.29
VMP1-210ENST00000589823 BAHD1Q8TBE0 780 aaPredicted RBP13.26□□□□□ -0.29
VMP1-210ENST00000589823 MCOLN3Q8TDD5 553 aa13.26□□□□□ -0.29
VMP1-210ENST00000589823 CCDC74AQ96AQ1 378 aa13.26□□□□□ -0.29
VMP1-210ENST00000589823 RAD51AP1Q96B01 352 aa13.26□□□□□ -0.29
VMP1-210ENST00000589823 NXNL1Q96CM4 212 aa13.26□□□□□ -0.29
VMP1-210ENST00000589823 HIST1H2AHQ96KK5 128 aa13.26□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 38.8 ms