RNA–Protein interactions for RNA: ENST00000588857.5

ATG4D-209, Transcript of autophagy related 4D cysteine peptidase, humanhuman

TSL 1 (best)

Gene ATG4D, Length 1,555 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4D-209ENST00000588857 UNC50Q53HI1 259 aa21.74■■□□□ 1.07
ATG4D-209ENST00000588857 TPRG1LQ5T0D9 272 aa21.74■■□□□ 1.07
ATG4D-209ENST00000588857 ANKS6Q68DC2 871 aa21.74■■□□□ 1.07
ATG4D-209ENST00000588857 CGB2Q6NT52 195 aa21.74■■□□□ 1.07
ATG4D-209ENST00000588857 XKR5Q6UX68 686 aa21.74■■□□□ 1.07
ATG4D-209ENST00000588857 PIGWQ7Z7B1 504 aa21.74■■□□□ 1.07
ATG4D-209ENST00000588857 OSGEPL1Q9H4B0 414 aa21.74■■□□□ 1.07
ATG4D-209ENST00000588857 NPHS2Q9NP85 383 aa21.74■■□□□ 1.07
ATG4D-209ENST00000588857 GON4LQ3T8J9 2241 aa21.74■■□□□ 1.07
ATG4D-209ENST00000588857 LRP4O75096 1905 aa21.74■■□□□ 1.07
ATG4D-209ENST00000588857 SNX3O60493 162 aa21.74■■□□□ 1.07
ATG4D-209ENST00000588857 CHRNGP07510 517 aa21.74■■□□□ 1.07
ATG4D-209ENST00000588857 AGTR2P50052 363 aa21.74■■□□□ 1.07
ATG4D-209ENST00000588857 TSSK4Q6SA08 328 aa21.74■■□□□ 1.07
ATG4D-209ENST00000588857 RD3Q7Z3Z2 195 aa21.74■■□□□ 1.07
ATG4D-209ENST00000588857 PDZD3Q86UT5 571 aa21.74■■□□□ 1.07
ATG4D-209ENST00000588857 RASGRP3Q8IV61 690 aa21.74■■□□□ 1.07
ATG4D-209ENST00000588857 TCAIMQ8N3R3 496 aa21.74■■□□□ 1.07
ATG4D-209ENST00000588857 THOC1Q96FV9 657 aaKnown RBP21.74■■□□□ 1.07
ATG4D-209ENST00000588857 KLHDC7BQ96G42 594 aa21.74■■□□□ 1.07
ATG4D-209ENST00000588857 PDXPQ96GD0 296 aa21.74■■□□□ 1.07
ATG4D-209ENST00000588857 SLC6A18Q96N87 628 aa21.74■■□□□ 1.07
ATG4D-209ENST00000588857 ORAI3Q9BRQ5 295 aa21.74■■□□□ 1.07
ATG4D-209ENST00000588857 OR52A5Q9H2C5 316 aa21.74■■□□□ 1.07
ATG4D-209ENST00000588857 GSTO2Q9H4Y5 243 aa21.74■■□□□ 1.07
ATG4D-209ENST00000588857 PRMT8Q9NR22 394 aaPredicted RBP21.74■■□□□ 1.07
ATG4D-209ENST00000588857 WWOXQ9NZC7 414 aa21.74■■□□□ 1.07
ATG4D-209ENST00000588857 EIF2B4Q9UI10 523 aaKnown RBP21.74■■□□□ 1.07
ATG4D-209ENST00000588857 PTBP2Q9UKA9 531 aaKnown RBP21.74■■□□□ 1.07
ATG4D-209ENST00000588857 RAP2CQ9Y3L5 183 aa21.74■■□□□ 1.07
ATG4D-209ENST00000588857 LRRC14BA6NHZ5 514 aa21.73■■□□□ 1.07
ATG4D-209ENST00000588857 ARHGEF33A8MVX0 844 aa21.73■■□□□ 1.07
ATG4D-209ENST00000588857 SLC35G4P0C7Q5 338 aa21.73■■□□□ 1.07
ATG4D-209ENST00000588857 THEGLP0DJG4 465 aa21.73■■□□□ 1.07
ATG4D-209ENST00000588857 KITP10721 976 aa21.73■■□□□ 1.07
ATG4D-209ENST00000588857 CCR10P46092 362 aa21.73■■□□□ 1.07
ATG4D-209ENST00000588857 SRP54P61011 504 aaKnown RBP21.73■■□□□ 1.07
ATG4D-209ENST00000588857 PRKAA1Q13131 559 aa21.73■■□□□ 1.07
ATG4D-209ENST00000588857 ZNF528Q3MIS6 628 aa21.73■■□□□ 1.07
ATG4D-209ENST00000588857 FBXO48Q5FWF7 155 aa21.73■■□□□ 1.07
ATG4D-209ENST00000588857 PIWIL2Q8TC59 973 aaKnown RBP21.73■■□□□ 1.07
ATG4D-209ENST00000588857 TSACCQ96A04 125 aaPredicted RBP21.73■■□□□ 1.07
ATG4D-209ENST00000588857 RHBDF1Q96CC6 855 aa21.73■■□□□ 1.07
ATG4D-209ENST00000588857 HSPA12BQ96MM6 686 aa21.73■■□□□ 1.07
ATG4D-209ENST00000588857 C1QTNF3Q9BXJ4 246 aa21.73■■□□□ 1.07
ATG4D-209ENST00000588857 MARCOQ9UEW3 520 aaPredicted RBP21.73■■□□□ 1.07
ATG4D-209ENST00000588857 KCNK6Q9Y257 313 aa21.73■■□□□ 1.07
ATG4D-209ENST00000588857 THADAQ6YHU6 1953 aa21.72■■□□□ 1.07
ATG4D-209ENST00000588857 PROB1E7EW31 1015 aa21.72■■□□□ 1.07
ATG4D-209ENST00000588857 IFRD1O00458 451 aaPredicted RBP21.72■■□□□ 1.07
ATG4D-209ENST00000588857 RPS17P08708 135 aaKnown RBP21.72■■□□□ 1.07
ATG4D-209ENST00000588857 IDSP22304 550 aa21.72■■□□□ 1.07
ATG4D-209ENST00000588857 ACADLP28330 430 aa21.72■■□□□ 1.07
ATG4D-209ENST00000588857 HNMTP50135 292 aa21.72■■□□□ 1.07
ATG4D-209ENST00000588857 CSTF1Q05048 431 aaKnown RBP21.72■■□□□ 1.07
ATG4D-209ENST00000588857 GALNT1Q10472 559 aaPredicted RBP21.72■■□□□ 1.07
ATG4D-209ENST00000588857 PCBP2Q15366 365 aaKnown RBP eCLIP21.72■■□□□ 1.07
ATG4D-209ENST00000588857 UNC5DQ6UXZ4 953 aa21.72■■□□□ 1.07
ATG4D-209ENST00000588857 MBOAT1Q6ZNC8 495 aa21.72■■□□□ 1.07
ATG4D-209ENST00000588857 ATG14Q6ZNE5 492 aa21.72■■□□□ 1.07
ATG4D-209ENST00000588857 RPS27LQ71UM5 84 aaKnown RBP21.72■■□□□ 1.07
ATG4D-209ENST00000588857 DCP2Q8IU60 420 aaKnown RBP21.72■■□□□ 1.07
ATG4D-209ENST00000588857 WDR75Q8IWA0 830 aaKnown RBP21.72■■□□□ 1.07
ATG4D-209ENST00000588857 LSMEM2Q8N112 164 aa21.72■■□□□ 1.07
ATG4D-209ENST00000588857 SEC16BQ96JE7 1060 aa21.72■■□□□ 1.07
ATG4D-209ENST00000588857 KLHL14Q9P2G3 628 aa21.72■■□□□ 1.07
ATG4D-209ENST00000588857 PSMD13Q9UNM6 376 aa21.72■■□□□ 1.07
ATG4D-209ENST00000588857 EPB41L3Q9Y2J2 1087 aaPredicted RBP21.72■■□□□ 1.07
ATG4D-209ENST00000588857 PLEKHM1Q9Y4G2 1056 aa21.72■■□□□ 1.07
ATG4D-209ENST00000588857 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa21.71■■□□□ 1.07
ATG4D-209ENST00000588857 BCKDHBP21953 392 aa21.71■■□□□ 1.07
ATG4D-209ENST00000588857 HOXD11P31277 338 aaPredicted RBP21.71■■□□□ 1.07
ATG4D-209ENST00000588857 BDKRB1P46663 353 aa21.71■■□□□ 1.07
ATG4D-209ENST00000588857 FNTBP49356 437 aa21.71■■□□□ 1.07
ATG4D-209ENST00000588857 CLCNKAP51800 687 aa21.71■■□□□ 1.07
ATG4D-209ENST00000588857 CDH13P55290 713 aa21.71■■□□□ 1.07
ATG4D-209ENST00000588857 LRP8Q14114 963 aa21.71■■□□□ 1.07
ATG4D-209ENST00000588857 ALYREFQ86V81 257 aaKnown RBP21.71■■□□□ 1.07
ATG4D-209ENST00000588857 TMEFF1Q8IYR6 380 aa21.71■■□□□ 1.07
ATG4D-209ENST00000588857 CACNA2D3Q8IZS8 1091 aa21.71■■□□□ 1.07
ATG4D-209ENST00000588857 SLC22A18ASQ8N1D0 253 aa21.71■■□□□ 1.07
ATG4D-209ENST00000588857 ZNF781Q8N8C0 355 aa21.71■■□□□ 1.07
ATG4D-209ENST00000588857 ESAMQ96AP7 390 aa21.71■■□□□ 1.07
ATG4D-209ENST00000588857 SHCBP1LQ9BZQ2 653 aa21.71■■□□□ 1.07
ATG4D-209ENST00000588857 WWP1Q9H0M0 922 aa21.71■■□□□ 1.07
ATG4D-209ENST00000588857 MIR1-1HGQ9H1L0 117 aa21.71■■□□□ 1.07
ATG4D-209ENST00000588857 PNPOQ9NVS9 261 aa21.71■■□□□ 1.07
ATG4D-209ENST00000588857 PCTPQ9UKL6 214 aa21.71■■□□□ 1.07
ATG4D-209ENST00000588857 ASF1AQ9Y294 204 aa21.71■■□□□ 1.07
ATG4D-209ENST00000588857 SCAMP1O15126 338 aa21.7■■□□□ 1.06
ATG4D-209ENST00000588857 TAPBPO15533 448 aa21.7■■□□□ 1.06
ATG4D-209ENST00000588857 RASGRP1O95267 797 aa21.7■■□□□ 1.06
ATG4D-209ENST00000588857 C1orf105O95561 183 aa21.7■■□□□ 1.06
ATG4D-209ENST00000588857 RPN2P04844 631 aa21.7■■□□□ 1.06
ATG4D-209ENST00000588857 RPL10P27635 214 aaKnown RBP21.7■■□□□ 1.06
ATG4D-209ENST00000588857 HSPA7P48741 367 aa21.7■■□□□ 1.06
ATG4D-209ENST00000588857 RPL14P50914 215 aaKnown RBP21.7■■□□□ 1.06
ATG4D-209ENST00000588857 CLCQ05315 142 aa21.7■■□□□ 1.06
ATG4D-209ENST00000588857 ALG11Q2TAA5 492 aa21.7■■□□□ 1.06
ATG4D-209ENST00000588857 C18orf21Q32NC0 220 aaPredicted RBP21.7■■□□□ 1.06
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms