RNA–Protein interactions for RNA: ENST00000587451.2

CACNA1A-208, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

TSL 1 (best)

Gene CACNA1A, Length 673 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-208ENST00000587451 VN1R1Q9GZP7 353 aa3.85□□□□□ -1.79
CACNA1A-208ENST00000587451 SEPT11Q9NVA2 429 aaKnown RBP3.85□□□□□ -1.79
CACNA1A-208ENST00000587451 RUSC2Q8N2Y8 1516 aa3.85□□□□□ -1.79
CACNA1A-208ENST00000587451 A0A1W2PR77 199 aa3.84□□□□□ -1.79
CACNA1A-208ENST00000587451 KRTAP9-6A8MVA2 160 aa3.84□□□□□ -1.79
CACNA1A-208ENST00000587451 GAPDHSO14556 408 aaPredicted RBP3.84□□□□□ -1.79
CACNA1A-208ENST00000587451 USO1O60763 962 aaKnown RBP3.84□□□□□ -1.79
CACNA1A-208ENST00000587451 PRAMEF11O60813 436 aa3.84□□□□□ -1.79
CACNA1A-208ENST00000587451 ZFAND5O76080 213 aa3.84□□□□□ -1.79
CACNA1A-208ENST00000587451 NXPH2O95156 264 aa3.84□□□□□ -1.79
CACNA1A-208ENST00000587451 TM4SF1P30408 202 aa3.84□□□□□ -1.79
CACNA1A-208ENST00000587451 SIRPAP78324 504 aa3.84□□□□□ -1.79
CACNA1A-208ENST00000587451 TMF1P82094 1093 aa3.84□□□□□ -1.79
CACNA1A-208ENST00000587451 DDX10Q13206 875 aaKnown RBP3.84□□□□□ -1.79
CACNA1A-208ENST00000587451 WLSQ5T9L3 541 aa3.84□□□□□ -1.79
CACNA1A-208ENST00000587451 GRTP1Q5TC63 336 aa3.84□□□□□ -1.79
CACNA1A-208ENST00000587451 RSRC2Q7L4I2 434 aaKnown RBP3.84□□□□□ -1.79
CACNA1A-208ENST00000587451 HAUS6Q7Z4H7 955 aa3.84□□□□□ -1.79
CACNA1A-208ENST00000587451 ZNF843Q8N446 348 aa3.84□□□□□ -1.79
CACNA1A-208ENST00000587451 TTC39CQ8N584 583 aa3.84□□□□□ -1.79
CACNA1A-208ENST00000587451 MOSPD2Q8NHP6 518 aa3.84□□□□□ -1.79
CACNA1A-208ENST00000587451 LRRC59Q96AG4 307 aaKnown RBP3.84□□□□□ -1.79
CACNA1A-208ENST00000587451 C18orf12Q96KH6 178 aa3.84□□□□□ -1.79
CACNA1A-208ENST00000587451 TIGD1Q96MW7 591 aa3.84□□□□□ -1.79
CACNA1A-208ENST00000587451 EGFL8Q99944 293 aa3.84□□□□□ -1.79
CACNA1A-208ENST00000587451 FUCA2Q9BTY2 467 aa3.84□□□□□ -1.79
CACNA1A-208ENST00000587451 LAT2Q9GZY6 243 aa3.84□□□□□ -1.79
CACNA1A-208ENST00000587451 LARSQ9P2J5 1176 aaKnown RBP3.84□□□□□ -1.79
CACNA1A-208ENST00000587451 HACL1Q9UJ83 578 aa3.84□□□□□ -1.79
CACNA1A-208ENST00000587451 LAS1LQ9Y4W2 734 aaKnown RBP3.84□□□□□ -1.79
CACNA1A-208ENST00000587451 ASTN2O75129 1339 aaPredicted RBP3.84□□□□□ -1.79
CACNA1A-208ENST00000587451 HYKKA2RU49 373 aa3.83□□□□□ -1.8
CACNA1A-208ENST00000587451 KPNA7A9QM74 516 aa3.83□□□□□ -1.8
CACNA1A-208ENST00000587451 B4DLN1 442 aa3.83□□□□□ -1.8
CACNA1A-208ENST00000587451 PTGES3LE9PB15 166 aa3.83□□□□□ -1.8
CACNA1A-208ENST00000587451 AP3D1O14617 1153 aa3.83□□□□□ -1.8
CACNA1A-208ENST00000587451 TSPAN1O60635 241 aa3.83□□□□□ -1.8
CACNA1A-208ENST00000587451 RNASEH1O60930 286 aaKnown RBP3.83□□□□□ -1.8
CACNA1A-208ENST00000587451 GJA1P17302 382 aa3.83□□□□□ -1.8
CACNA1A-208ENST00000587451 CA4P22748 312 aa3.83□□□□□ -1.8
CACNA1A-208ENST00000587451 PSMB10P40306 273 aa3.83□□□□□ -1.8
CACNA1A-208ENST00000587451 MRPL12P52815 198 aaKnown RBP3.83□□□□□ -1.8
CACNA1A-208ENST00000587451 PNRC1Q12796 327 aaPredicted RBP3.83□□□□□ -1.8
CACNA1A-208ENST00000587451 FIP1L1Q6UN15 594 aaKnown RBP3.83□□□□□ -1.8
CACNA1A-208ENST00000587451 CLEC17AQ6ZS10 378 aa3.83□□□□□ -1.8
CACNA1A-208ENST00000587451 LRRTM1Q86UE6 522 aa3.83□□□□□ -1.8
CACNA1A-208ENST00000587451 PIGZQ86VD9 579 aa3.83□□□□□ -1.8
CACNA1A-208ENST00000587451 FAM114A1Q8IWE2 563 aa3.83□□□□□ -1.8
CACNA1A-208ENST00000587451 KBTBD8Q8NFY9 601 aa3.83□□□□□ -1.8
CACNA1A-208ENST00000587451 CCDC107Q8WV48 283 aa3.83□□□□□ -1.8
CACNA1A-208ENST00000587451 MPP4Q96JB8 637 aa3.83□□□□□ -1.8
CACNA1A-208ENST00000587451 NEK1Q96PY6 1258 aa3.83□□□□□ -1.8
CACNA1A-208ENST00000587451 KRT12Q99456 494 aa3.83□□□□□ -1.8
CACNA1A-208ENST00000587451 LMF2Q9BU23 707 aaKnown RBP3.83□□□□□ -1.8
CACNA1A-208ENST00000587451 FNDC11Q9BVV2 318 aa3.83□□□□□ -1.8
CACNA1A-208ENST00000587451 KCNK15Q9H427 330 aa3.83□□□□□ -1.8
CACNA1A-208ENST00000587451 ZHX3Q9H4I2 956 aa3.83□□□□□ -1.8
CACNA1A-208ENST00000587451 SYNCQ9H7C4 482 aa3.83□□□□□ -1.8
CACNA1A-208ENST00000587451 RHCGQ9UBD6 479 aa3.83□□□□□ -1.8
CACNA1A-208ENST00000587451 GRID1Q9ULK0 1009 aa3.83□□□□□ -1.8
CACNA1A-208ENST00000587451 ZNF148Q9UQR1 794 aa3.83□□□□□ -1.8
CACNA1A-208ENST00000587451 WDR37Q9Y2I8 494 aa3.83□□□□□ -1.8
CACNA1A-208ENST00000587451 RIPK3Q9Y572 518 aa3.83□□□□□ -1.8
CACNA1A-208ENST00000587451 TP53BP1Q12888 1972 aaPredicted RBP3.83□□□□□ -1.8
CACNA1A-208ENST00000587451 LNP1A1A4G5 178 aa3.82□□□□□ -1.8
CACNA1A-208ENST00000587451 PALM2-AKAP2B1ALY0 433 aaPredicted RBP3.82□□□□□ -1.8
CACNA1A-208ENST00000587451 KHDRBS3O75525 346 aaKnown RBP3.82□□□□□ -1.8
CACNA1A-208ENST00000587451 GSDMDP57764 484 aa3.82□□□□□ -1.8
CACNA1A-208ENST00000587451 DSCR10P59022 87 aa3.82□□□□□ -1.8
CACNA1A-208ENST00000587451 DCAF7P61962 342 aa3.82□□□□□ -1.8
CACNA1A-208ENST00000587451 CDK3Q00526 305 aa3.82□□□□□ -1.8
CACNA1A-208ENST00000587451 HLA-BQ31612 363 aa3.82□□□□□ -1.8
CACNA1A-208ENST00000587451 XKR6Q5GH73 641 aa3.82□□□□□ -1.8
CACNA1A-208ENST00000587451 CCDC30Q5VVM6 783 aa3.82□□□□□ -1.8
CACNA1A-208ENST00000587451 DHRS7BQ6IAN0 325 aaPredicted RBP3.82□□□□□ -1.8
CACNA1A-208ENST00000587451 DOK6Q6PKX4 331 aa3.82□□□□□ -1.8
CACNA1A-208ENST00000587451 COMMD2Q86X83 199 aa3.82□□□□□ -1.8
CACNA1A-208ENST00000587451 CFAP206Q8IYR0 622 aa3.82□□□□□ -1.8
CACNA1A-208ENST00000587451 OR5AP2Q8NGF4 316 aa3.82□□□□□ -1.8
CACNA1A-208ENST00000587451 OR4C3Q8NH37 302 aa3.82□□□□□ -1.8
CACNA1A-208ENST00000587451 ARHGAP45Q92619 1136 aa3.82□□□□□ -1.8
CACNA1A-208ENST00000587451 USP28Q96RU2 1077 aa3.82□□□□□ -1.8
CACNA1A-208ENST00000587451 BTBD10Q9BSF8 475 aa3.82□□□□□ -1.8
CACNA1A-208ENST00000587451 SPATC1LQ9H0A9 340 aa3.82□□□□□ -1.8
CACNA1A-208ENST00000587451 ARRDC1-AS1Q9H2J1 176 aa3.82□□□□□ -1.8
CACNA1A-208ENST00000587451 SDR39U1Q9NRG7 319 aaPredicted RBP3.82□□□□□ -1.8
CACNA1A-208ENST00000587451 FGF21Q9NSA1 209 aa3.82□□□□□ -1.8
CACNA1A-208ENST00000587451 RNF186Q9NXI6 227 aa3.82□□□□□ -1.8
CACNA1A-208ENST00000587451 ARHGEF38Q9NXL2 777 aa3.82□□□□□ -1.8
CACNA1A-208ENST00000587451 SPHK1Q9NYA1 384 aa3.82□□□□□ -1.8
CACNA1A-208ENST00000587451 PSD3Q9NYI0 1048 aa3.82□□□□□ -1.8
CACNA1A-208ENST00000587451 STK26Q9P289 416 aa3.82□□□□□ -1.8
CACNA1A-208ENST00000587451 NME7Q9Y5B8 376 aa3.82□□□□□ -1.8
CACNA1A-208ENST00000587451 SOS1Q07889 1333 aaPredicted RBP3.81□□□□□ -1.8
CACNA1A-208ENST00000587451 DFFBO76075 338 aa3.81□□□□□ -1.8
CACNA1A-208ENST00000587451 GARSP41250 739 aaKnown RBP3.81□□□□□ -1.8
CACNA1A-208ENST00000587451 SLC15A1P46059 708 aa3.81□□□□□ -1.8
CACNA1A-208ENST00000587451 HUNKP57058 714 aa3.81□□□□□ -1.8
CACNA1A-208ENST00000587451 CXCL9Q07325 125 aa3.81□□□□□ -1.8
CACNA1A-208ENST00000587451 FASTKD1Q53R41 847 aaKnown RBP3.81□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms