RNA–Protein interactions for RNA: ENST00000587339.2

TRIM47-204, Transcript of tripartite motif containing 47, humanhuman

TSL 1 (best)

Gene TRIM47, Length 1,907 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM47-204ENST00000587339 MRGPRX1Q96LB2 322 aa19.4■□□□□ 0.7
TRIM47-204ENST00000587339 FOPNLQ96NB1 174 aa19.4■□□□□ 0.7
TRIM47-204ENST00000587339 MIPEPQ99797 713 aa19.4■□□□□ 0.7
TRIM47-204ENST00000587339 LGR4Q9BXB1 951 aa19.4■□□□□ 0.7
TRIM47-204ENST00000587339 WDR26Q9H7D7 661 aa19.4■□□□□ 0.7
TRIM47-204ENST00000587339 PFDN4Q9NQP4 134 aa19.4■□□□□ 0.7
TRIM47-204ENST00000587339 FZD4Q9ULV1 537 aa19.4■□□□□ 0.7
TRIM47-204ENST00000587339 NCKAP1Q9Y2A7 1128 aa19.4■□□□□ 0.7
TRIM47-204ENST00000587339 SHISA7A6NL88 538 aa19.39■□□□□ 0.7
TRIM47-204ENST00000587339 RNGTTO60942 597 aaKnown RBP19.39■□□□□ 0.7
TRIM47-204ENST00000587339 PRDX6P30041 224 aa19.39■□□□□ 0.7
TRIM47-204ENST00000587339 PIK3CGP48736 1102 aa19.39■□□□□ 0.7
TRIM47-204ENST00000587339 MXRA7P84157 204 aa19.39■□□□□ 0.7
TRIM47-204ENST00000587339 TRAF3Q13114 568 aa19.39■□□□□ 0.7
TRIM47-204ENST00000587339 TDGQ13569 410 aa19.39■□□□□ 0.7
TRIM47-204ENST00000587339 IRF4Q15306 451 aa19.39■□□□□ 0.7
TRIM47-204ENST00000587339 TMEM259Q4ZIN3 620 aa19.39■□□□□ 0.7
TRIM47-204ENST00000587339 MILR1Q7Z6M3 343 aa19.39■□□□□ 0.7
TRIM47-204ENST00000587339 METTL6Q8TCB7 284 aa19.39■□□□□ 0.7
TRIM47-204ENST00000587339 TEX101Q9BY14 249 aa19.39■□□□□ 0.7
TRIM47-204ENST00000587339 SLC17A9Q9BYT1 436 aa19.39■□□□□ 0.7
TRIM47-204ENST00000587339 SLC32A1Q9H598 525 aa19.39■□□□□ 0.7
TRIM47-204ENST00000587339 AKTIPQ9H8T0 292 aa19.39■□□□□ 0.7
TRIM47-204ENST00000587339 KATNA1O75449 491 aa19.39■□□□□ 0.69
TRIM47-204ENST00000587339 CATP04040 527 aaKnown RBP19.39■□□□□ 0.69
TRIM47-204ENST00000587339 PIK3R1P27986 724 aa19.39■□□□□ 0.69
TRIM47-204ENST00000587339 TRIM23P36406 574 aa19.39■□□□□ 0.69
TRIM47-204ENST00000587339 PLOD1Q02809 727 aaPredicted RBP19.39■□□□□ 0.69
TRIM47-204ENST00000587339 MAP7D1Q3KQU3 841 aa19.39■□□□□ 0.69
TRIM47-204ENST00000587339 TMEM92Q6UXU6 159 aa19.39■□□□□ 0.69
TRIM47-204ENST00000587339 USP30Q70CQ3 517 aa19.39■□□□□ 0.69
TRIM47-204ENST00000587339 TP53I13Q8NBR0 393 aaPredicted RBP19.39■□□□□ 0.69
TRIM47-204ENST00000587339 RBM15BQ8NDT2 890 aaKnown RBP19.39■□□□□ 0.69
TRIM47-204ENST00000587339 OR2L2Q8NH16 312 aa19.39■□□□□ 0.69
TRIM47-204ENST00000587339 UTP4Q969X6 686 aaKnown RBP19.39■□□□□ 0.69
TRIM47-204ENST00000587339 TUBGCP3Q96CW5 907 aa19.39■□□□□ 0.69
TRIM47-204ENST00000587339 C1QTNF7Q9BXJ2 289 aa19.39■□□□□ 0.69
TRIM47-204ENST00000587339 PREBQ9HCU5 417 aa19.39■□□□□ 0.69
TRIM47-204ENST00000587339 SLC2A4RGQ9NR83 387 aa19.39■□□□□ 0.69
TRIM47-204ENST00000587339 OR1A2Q9Y585 309 aa19.39■□□□□ 0.69
TRIM47-204ENST00000587339 ARHGEF33A8MVX0 844 aa19.38■□□□□ 0.69
TRIM47-204ENST00000587339 CHUKO15111 745 aa19.38■□□□□ 0.69
TRIM47-204ENST00000587339 RASSF9O75901 435 aa19.38■□□□□ 0.69
TRIM47-204ENST00000587339 CAPN1P07384 714 aa19.38■□□□□ 0.69
TRIM47-204ENST00000587339 COX4I1P13073 169 aa19.38■□□□□ 0.69
TRIM47-204ENST00000587339 TEAD1P28347 426 aa19.38■□□□□ 0.69
TRIM47-204ENST00000587339 SFSWAPQ12872 951 aaKnown RBP19.38■□□□□ 0.69
TRIM47-204ENST00000587339 PLA2G4EQ3MJ16 856 aa19.38■□□□□ 0.69
TRIM47-204ENST00000587339 EEF1AKMT2Q5JPI9 291 aaKnown RBP19.38■□□□□ 0.69
TRIM47-204ENST00000587339 KIAA1324Q6UXG2 1013 aaKnown RBP19.38■□□□□ 0.69
TRIM47-204ENST00000587339 LRRC70Q7Z2Q7 622 aa19.38■□□□□ 0.69
TRIM47-204ENST00000587339 C11orf96Q7Z7L8 435 aa19.38■□□□□ 0.69
TRIM47-204ENST00000587339 FAM124AQ86V42 546 aa19.38■□□□□ 0.69
TRIM47-204ENST00000587339 LONP2Q86WA8 852 aa19.38■□□□□ 0.69
TRIM47-204ENST00000587339 HORMAD1Q86X24 394 aa19.38■□□□□ 0.69
TRIM47-204ENST00000587339 FBXO27Q8NI29 283 aa19.38■□□□□ 0.69
TRIM47-204ENST00000587339 HM13Q8TCT9 377 aa19.38■□□□□ 0.69
TRIM47-204ENST00000587339 CDX2Q99626 313 aaPredicted RBP19.38■□□□□ 0.69
TRIM47-204ENST00000587339 CCT7Q99832 543 aa19.38■□□□□ 0.69
TRIM47-204ENST00000587339 CADM1Q9BY67 442 aaKnown RBP19.38■□□□□ 0.69
TRIM47-204ENST00000587339 C1orf21Q9H246 121 aa19.38■□□□□ 0.69
TRIM47-204ENST00000587339 POLG2Q9UHN1 485 aa19.38■□□□□ 0.69
TRIM47-204ENST00000587339 MMP17Q9ULZ9 603 aa19.38■□□□□ 0.69
TRIM47-204ENST00000587339 NDRG2Q9UN36 371 aaKnown RBP19.38■□□□□ 0.69
TRIM47-204ENST00000587339 PRKAB1Q9Y478 270 aa19.38■□□□□ 0.69
TRIM47-204ENST00000587339 KRT87PA6NCN2 255 aa19.37■□□□□ 0.69
TRIM47-204ENST00000587339 MGAT4DA6NG13 374 aa19.37■□□□□ 0.69
TRIM47-204ENST00000587339 GSC2O15499 205 aa19.37■□□□□ 0.69
TRIM47-204ENST00000587339 VPS4BO75351 444 aa19.37■□□□□ 0.69
TRIM47-204ENST00000587339 THRAP10827 490 aa19.37■□□□□ 0.69
TRIM47-204ENST00000587339 EZRP15311 586 aaKnown RBP19.37■□□□□ 0.69
TRIM47-204ENST00000587339 ELF3P78545 371 aaPredicted RBP19.37■□□□□ 0.69
TRIM47-204ENST00000587339 ZXDCQ2QGD7 858 aaPredicted RBP19.37■□□□□ 0.69
TRIM47-204ENST00000587339 PTCHD3Q3KNS1 767 aa19.37■□□□□ 0.69
TRIM47-204ENST00000587339 CHCHD4Q8N4Q1 142 aa19.37■□□□□ 0.69
TRIM47-204ENST00000587339 MCUR1Q96AQ8 359 aa19.37■□□□□ 0.69
TRIM47-204ENST00000587339 NTMT1Q9BV86 223 aa19.37■□□□□ 0.69
TRIM47-204ENST00000587339 ST14Q9Y5Y6 855 aa19.37■□□□□ 0.69
TRIM47-204ENST00000587339 WDR47O94967 919 aa19.37■□□□□ 0.69
TRIM47-204ENST00000587339 C7P10643 843 aa19.37■□□□□ 0.69
TRIM47-204ENST00000587339 HGFP14210 728 aa19.37■□□□□ 0.69
TRIM47-204ENST00000587339 NDUFV2P19404 249 aa19.37■□□□□ 0.69
TRIM47-204ENST00000587339 MAT2AP31153 395 aaKnown RBP19.37■□□□□ 0.69
TRIM47-204ENST00000587339 SLC6A12P48065 614 aa19.37■□□□□ 0.69
TRIM47-204ENST00000587339 CCR3P51677 355 aa19.37■□□□□ 0.69
TRIM47-204ENST00000587339 NFE2L1Q14494 772 aa19.37■□□□□ 0.69
TRIM47-204ENST00000587339 FBXW10Q5XX13 1052 aa19.37■□□□□ 0.69
TRIM47-204ENST00000587339 NEK5Q6P3R8 708 aa19.37■□□□□ 0.69
TRIM47-204ENST00000587339 LRRTM4Q86VH4 590 aa19.37■□□□□ 0.69
TRIM47-204ENST00000587339 RP9Q8TA86 221 aaKnown RBP19.37■□□□□ 0.69
TRIM47-204ENST00000587339 FOXJ1Q92949 421 aa19.37■□□□□ 0.69
TRIM47-204ENST00000587339 PYCR2Q96C36 320 aa19.37■□□□□ 0.69
TRIM47-204ENST00000587339 PHPT1Q9NRX4 125 aaPredicted RBP19.37■□□□□ 0.69
TRIM47-204ENST00000587339 PCYT1BQ9Y5K3 369 aaPredicted RBP19.37■□□□□ 0.69
TRIM47-204ENST00000587339 TCRBV21S2A2A0A5A6 115 aa19.36■□□□□ 0.69
TRIM47-204ENST00000587339 EBLN1P0CF75 366 aa19.36■□□□□ 0.69
TRIM47-204ENST00000587339 HMOX2P30519 316 aa19.36■□□□□ 0.69
TRIM47-204ENST00000587339 SQLEQ14534 574 aa19.36■□□□□ 0.69
TRIM47-204ENST00000587339 DNAL1Q4LDG9 190 aa19.36■□□□□ 0.69
TRIM47-204ENST00000587339 TCHHL1Q5QJ38 904 aaPredicted RBP19.36■□□□□ 0.69
Retrieved 100 of 20,778 RNA–protein pairs in 35.9 ms