RNA–Protein interactions for RNA: ENST00000584754.1

PPP4R1-229, Transcript of protein phosphatase 4 regulatory subunit 1, human

TSL 5

Gene PPP4R1, Length 509 nt, Biotype processed transcript, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PPP4R1-229	ENST00000584754	PSMA7	O14818	248 aa		3.56	□□□□□ -1.84
PPP4R1-229	ENST00000584754	SLC16A5	O15375	505 aa		3.56	□□□□□ -1.84
PPP4R1-229	ENST00000584754	ZBTB43	O43298	467 aa		3.56	□□□□□ -1.84
PPP4R1-229	ENST00000584754	NDUFS7	O75251	213 aa		3.56	□□□□□ -1.84
PPP4R1-229	ENST00000584754	RSL1D1	O76021	490 aa	Known RBP	3.56	□□□□□ -1.84
PPP4R1-229	ENST00000584754	G6PD	P11413	515 aa		3.56	□□□□□ -1.84
PPP4R1-229	ENST00000584754	FCGR1A	P12314	374 aa		3.56	□□□□□ -1.84
PPP4R1-229	ENST00000584754	ERCC2	P18074	760 aa		3.56	□□□□□ -1.84
PPP4R1-229	ENST00000584754	EIF2S3	P41091	472 aa	Known RBP	3.56	□□□□□ -1.84
PPP4R1-229	ENST00000584754	RAB28	P51157	221 aa		3.56	□□□□□ -1.84
PPP4R1-229	ENST00000584754	SEC61A1	P61619	476 aa	Known RBP	3.56	□□□□□ -1.84
PPP4R1-229	ENST00000584754	SNRPE	P62304	92 aa	Known RBP	3.56	□□□□□ -1.84
PPP4R1-229	ENST00000584754	PDE1B	Q01064	536 aa		3.56	□□□□□ -1.84
PPP4R1-229	ENST00000584754	ITPK1	Q13572	414 aa		3.56	□□□□□ -1.84
PPP4R1-229	ENST00000584754	SLC39A14	Q15043	492 aa		3.56	□□□□□ -1.84
PPP4R1-229	ENST00000584754	OASL	Q15646	514 aa	Known RBP	3.56	□□□□□ -1.84
PPP4R1-229	ENST00000584754	SNAPC1	Q16533	368 aa		3.56	□□□□□ -1.84
PPP4R1-229	ENST00000584754	SYT16	Q17RD7	645 aa		3.56	□□□□□ -1.84
PPP4R1-229	ENST00000584754	KCNT1	Q5JUK3	1230 aa		3.56	□□□□□ -1.84
PPP4R1-229	ENST00000584754	RGMB	Q6NW40	437 aa		3.56	□□□□□ -1.84
PPP4R1-229	ENST00000584754	PM20D2	Q8IYS1	436 aa		3.56	□□□□□ -1.84
PPP4R1-229	ENST00000584754	TDRD5	Q8NAT2	981 aa	Known RBP	3.56	□□□□□ -1.84
PPP4R1-229	ENST00000584754	PIGB	Q92521	554 aa		3.56	□□□□□ -1.84
PPP4R1-229	ENST00000584754	ABHD8	Q96I13	439 aa		3.56	□□□□□ -1.84
PPP4R1-229	ENST00000584754	DUX5	Q96PT3	197 aa		3.56	□□□□□ -1.84
PPP4R1-229	ENST00000584754	ZWILCH	Q9H900	591 aa		3.56	□□□□□ -1.84
PPP4R1-229	ENST00000584754	SMARCAL1	Q9NZC9	954 aa		3.56	□□□□□ -1.84
PPP4R1-229	ENST00000584754	LARS	Q9P2J5	1176 aa	Known RBP	3.56	□□□□□ -1.84
PPP4R1-229	ENST00000584754	FRMD4A	Q9P2Q2	1039 aa	Predicted RBP	3.56	□□□□□ -1.84
PPP4R1-229	ENST00000584754	HACL1	Q9UJ83	578 aa		3.56	□□□□□ -1.84
PPP4R1-229	ENST00000584754	PADI1	Q9ULC6	663 aa		3.56	□□□□□ -1.84
PPP4R1-229	ENST00000584754	PCDHGB1	Q9Y5G3	927 aa		3.56	□□□□□ -1.84
PPP4R1-229	ENST00000584754	AFDN	P55196	1824 aa	Known RBP	3.56	□□□□□ -1.84
PPP4R1-229	ENST00000584754	COL5A3	P25940	1745 aa	Predicted RBP	3.56	□□□□□ -1.84
PPP4R1-229	ENST00000584754	EDC4	Q6P2E9	1401 aa	Known RBP	3.55	□□□□□ -1.84
PPP4R1-229	ENST00000584754	CGNL1	Q0VF96	1302 aa		3.55	□□□□□ -1.84
PPP4R1-229	ENST00000584754	PCDH11X	Q9BZA7	1347 aa		3.55	□□□□□ -1.84
PPP4R1-229	ENST00000584754	PCDH11Y	Q9BZA8	1340 aa		3.55	□□□□□ -1.84
PPP4R1-229	ENST00000584754		A0A1W2PR77	199 aa		3.55	□□□□□ -1.84
PPP4R1-229	ENST00000584754	hDV102S1	A0JD36	115 aa		3.55	□□□□□ -1.84
PPP4R1-229	ENST00000584754	GLTPD2	A6NH11	291 aa		3.55	□□□□□ -1.84
PPP4R1-229	ENST00000584754	FAM90A26	D6RGX4	464 aa		3.55	□□□□□ -1.84
PPP4R1-229	ENST00000584754	ANKRD28	O15084	1053 aa		3.55	□□□□□ -1.84
PPP4R1-229	ENST00000584754	KCNA5	P22460	613 aa		3.55	□□□□□ -1.84
PPP4R1-229	ENST00000584754	HMGB2	P26583	209 aa	Known RBP	3.55	□□□□□ -1.84
PPP4R1-229	ENST00000584754	MLLT10	P55197	1068 aa		3.55	□□□□□ -1.84
PPP4R1-229	ENST00000584754	RPL36A	P83881	106 aa	Known RBP	3.55	□□□□□ -1.84
PPP4R1-229	ENST00000584754	TFCP2	Q12800	502 aa		3.55	□□□□□ -1.84
PPP4R1-229	ENST00000584754	TRAF3	Q13114	568 aa		3.55	□□□□□ -1.84
PPP4R1-229	ENST00000584754	EFNB3	Q15768	340 aa		3.55	□□□□□ -1.84
PPP4R1-229	ENST00000584754	EIF2S3L	Q2VIR3	472 aa	Known RBP	3.55	□□□□□ -1.84
PPP4R1-229	ENST00000584754	TMEM35A	Q53FP2	167 aa		3.55	□□□□□ -1.84
PPP4R1-229	ENST00000584754	IGSF11	Q5DX21	431 aa		3.55	□□□□□ -1.84
PPP4R1-229	ENST00000584754	C1orf141	Q5JVX7	400 aa		3.55	□□□□□ -1.84
PPP4R1-229	ENST00000584754	C18orf63	Q68DL7	685 aa		3.55	□□□□□ -1.84
PPP4R1-229	ENST00000584754	C11orf88	Q6PI97	169 aa		3.55	□□□□□ -1.84
PPP4R1-229	ENST00000584754	PRSS57	Q6UWY2	283 aa		3.55	□□□□□ -1.84
PPP4R1-229	ENST00000584754	SLFN11	Q7Z7L1	901 aa		3.55	□□□□□ -1.84
PPP4R1-229	ENST00000584754	VSIG1	Q86XK7	387 aa		3.55	□□□□□ -1.84
PPP4R1-229	ENST00000584754	LINC00346	Q8IVM7	164 aa		3.55	□□□□□ -1.84
PPP4R1-229	ENST00000584754	RNF113B	Q8IZP6	322 aa	Known RBP	3.55	□□□□□ -1.84
PPP4R1-229	ENST00000584754	BEST3	Q8N1M1	668 aa		3.55	□□□□□ -1.84
PPP4R1-229	ENST00000584754	SLC5A8	Q8N695	610 aa		3.55	□□□□□ -1.84
PPP4R1-229	ENST00000584754	NKAIN3	Q8N8D7	197 aa		3.55	□□□□□ -1.84
PPP4R1-229	ENST00000584754	SPATA3	Q8NHX4	192 aa		3.55	□□□□□ -1.84
PPP4R1-229	ENST00000584754	UTP15	Q8TED0	518 aa	Known RBP	3.55	□□□□□ -1.84
PPP4R1-229	ENST00000584754	TMED6	Q8WW62	240 aa		3.55	□□□□□ -1.84
PPP4R1-229	ENST00000584754	SPACA9	Q96E40	222 aa	Predicted RBP	3.55	□□□□□ -1.84
PPP4R1-229	ENST00000584754	TTC14	Q96N46	770 aa		3.55	□□□□□ -1.84
PPP4R1-229	ENST00000584754	ABHD1	Q96SE0	405 aa		3.55	□□□□□ -1.84
PPP4R1-229	ENST00000584754	DDO	Q99489	341 aa		3.55	□□□□□ -1.84
PPP4R1-229	ENST00000584754	SEPHS2	Q99611	448 aa		3.55	□□□□□ -1.84
PPP4R1-229	ENST00000584754	SLC25A23	Q9BV35	468 aa		3.55	□□□□□ -1.84
PPP4R1-229	ENST00000584754	TXLNG	Q9NUQ3	528 aa		3.55	□□□□□ -1.84
PPP4R1-229	ENST00000584754	OCIAD1	Q9NX40	245 aa		3.55	□□□□□ -1.84
PPP4R1-229	ENST00000584754	RCC2	Q9P258	522 aa	Known RBP	3.55	□□□□□ -1.84
PPP4R1-229	ENST00000584754	SLC9A2	Q9UBY0	812 aa		3.55	□□□□□ -1.84
PPP4R1-229	ENST00000584754	ANAPC5	Q9UJX4	755 aa		3.55	□□□□□ -1.84
PPP4R1-229	ENST00000584754	VDAC3	Q9Y277	283 aa		3.55	□□□□□ -1.84
PPP4R1-229	ENST00000584754	SNX9	Q9Y5X1	595 aa		3.55	□□□□□ -1.84
PPP4R1-229	ENST00000584754	DLEC1	Q9Y238	1755 aa		3.55	□□□□□ -1.84
PPP4R1-229	ENST00000584754	KIAA0100	Q14667	2235 aa	Known RBP	3.55	□□□□□ -1.84
PPP4R1-229	ENST00000584754	MUC3A	Q02505	3323 aa		3.54	□□□□□ -1.84
PPP4R1-229	ENST00000584754		A0A1W2PP64	1363 aa		3.54	□□□□□ -1.84
PPP4R1-229	ENST00000584754	CNTNAP1	P78357	1384 aa		3.54	□□□□□ -1.84
PPP4R1-229	ENST00000584754	PTPRC	P08575	1304 aa		3.54	□□□□□ -1.84
PPP4R1-229	ENST00000584754	IGLV5-37	A0A075B6J1	123 aa		3.54	□□□□□ -1.84
PPP4R1-229	ENST00000584754	EDDM13	A0A1B0GTR0	161 aa		3.54	□□□□□ -1.84
PPP4R1-229	ENST00000584754	LILRA5	A6NI73	299 aa		3.54	□□□□□ -1.84
PPP4R1-229	ENST00000584754	ADAMDEC1	O15204	470 aa		3.54	□□□□□ -1.84
PPP4R1-229	ENST00000584754	ZBTB11	O95625	1053 aa	Predicted RBP	3.54	□□□□□ -1.84
PPP4R1-229	ENST00000584754	RPN1	P04843	607 aa	Known RBP	3.54	□□□□□ -1.84
PPP4R1-229	ENST00000584754	LINGO3	P0C6S8	592 aa		3.54	□□□□□ -1.84
PPP4R1-229	ENST00000584754	PFKFB1	P16118	471 aa		3.54	□□□□□ -1.84
PPP4R1-229	ENST00000584754	ZNF12	P17014	697 aa		3.54	□□□□□ -1.84
PPP4R1-229	ENST00000584754	TCEA1	P23193	301 aa	Known RBP	3.54	□□□□□ -1.84
PPP4R1-229	ENST00000584754	PCGF2	P35227	344 aa		3.54	□□□□□ -1.84
PPP4R1-229	ENST00000584754	GNL1	P36915	607 aa	Predicted RBP	3.54	□□□□□ -1.84
PPP4R1-229	ENST00000584754	APOBEC1	P41238	236 aa	Known RBP	3.54	□□□□□ -1.84
PPP4R1-229	ENST00000584754	CCR3	P51677	355 aa		3.54	□□□□□ -1.84

Retrieved 100 of 20,778 RNA–protein pairs in 37.6 ms