RNA–Protein interactions for RNA: ENST00000584216.5

COPS3-218, Transcript of COP9 signalosome subunit 3, humanhuman

TSL 3

Gene COPS3, Length 876 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS3-218ENST00000584216 C1orf189Q5VU69 101 aa12.91□□□□□ -0.34
COPS3-218ENST00000584216 PRAMEF13Q5VWM6 474 aa12.91□□□□□ -0.34
COPS3-218ENST00000584216 SPESP1Q6UW49 350 aa12.91□□□□□ -0.34
COPS3-218ENST00000584216 KDELC1Q6UW63 502 aa12.91□□□□□ -0.34
COPS3-218ENST00000584216 GDF7Q7Z4P5 450 aa12.91□□□□□ -0.34
COPS3-218ENST00000584216 PPP1R32Q7Z5V6 425 aa12.91□□□□□ -0.34
COPS3-218ENST00000584216 CPNE8Q86YQ8 564 aa12.91□□□□□ -0.34
COPS3-218ENST00000584216 RFX6Q8HWS3 928 aa12.91□□□□□ -0.34
COPS3-218ENST00000584216 OR52E1Q8NGJ3 308 aa12.91□□□□□ -0.34
COPS3-218ENST00000584216 CPLX3Q8WVH0 158 aa12.91□□□□□ -0.34
COPS3-218ENST00000584216 VAT1Q99536 393 aa12.91□□□□□ -0.34
COPS3-218ENST00000584216 NDC1Q9BTX1 674 aa12.91□□□□□ -0.34
COPS3-218ENST00000584216 ASB8Q9H765 288 aa12.91□□□□□ -0.34
COPS3-218ENST00000584216 IRAK4Q9NWZ3 460 aa12.91□□□□□ -0.34
COPS3-218ENST00000584216 KLHL8Q9P2G9 620 aaPredicted RBP12.91□□□□□ -0.34
COPS3-218ENST00000584216 CRLS1Q9UJA2 301 aa12.91□□□□□ -0.34
COPS3-218ENST00000584216 KLF2Q9Y5W3 355 aaPredicted RBP12.91□□□□□ -0.34
COPS3-218ENST00000584216 BUD23O43709 281 aaKnown RBP12.9□□□□□ -0.34
COPS3-218ENST00000584216 SRP72O76094 671 aaKnown RBP12.9□□□□□ -0.34
COPS3-218ENST00000584216 KRT1P04264 644 aa12.9□□□□□ -0.34
COPS3-218ENST00000584216 PIM1P11309 404 aaPredicted RBP12.9□□□□□ -0.34
COPS3-218ENST00000584216 PVRP15151 417 aa12.9□□□□□ -0.34
COPS3-218ENST00000584216 NFKB1P19838 968 aa12.9□□□□□ -0.34
COPS3-218ENST00000584216 MMP11P24347 488 aa12.9□□□□□ -0.34
COPS3-218ENST00000584216 CHRNA4P43681 627 aa12.9□□□□□ -0.34
COPS3-218ENST00000584216 DYNLT1P63172 113 aa12.9□□□□□ -0.34
COPS3-218ENST00000584216 ZBED6P86452 979 aa12.9□□□□□ -0.34
COPS3-218ENST00000584216 TYRO3Q06418 890 aa12.9□□□□□ -0.34
COPS3-218ENST00000584216 RPA4Q13156 261 aa12.9□□□□□ -0.34
COPS3-218ENST00000584216 PRKD1Q15139 912 aaPredicted RBP12.9□□□□□ -0.34
COPS3-218ENST00000584216 HIF1AQ16665 826 aa12.9□□□□□ -0.34
COPS3-218ENST00000584216 ANO6Q4KMQ2 910 aa12.9□□□□□ -0.34
COPS3-218ENST00000584216 MRPL14Q6P1L8 145 aaKnown RBP12.9□□□□□ -0.34
COPS3-218ENST00000584216 IGFL2Q6UWQ7 119 aa12.9□□□□□ -0.34
COPS3-218ENST00000584216 NPNTQ6UXI9 565 aa12.9□□□□□ -0.34
COPS3-218ENST00000584216 CLEC17AQ6ZS10 378 aa12.9□□□□□ -0.34
COPS3-218ENST00000584216 DAAM2Q86T65 1068 aa12.9□□□□□ -0.34
COPS3-218ENST00000584216 ZC3H18Q86VM9 953 aaKnown RBP12.9□□□□□ -0.34
COPS3-218ENST00000584216 FJX1Q86VR8 437 aa12.9□□□□□ -0.34
COPS3-218ENST00000584216 BCORP1Q8N888 145 aa12.9□□□□□ -0.34
COPS3-218ENST00000584216 IPMKQ8NFU5 416 aa12.9□□□□□ -0.34
COPS3-218ENST00000584216 DLG3Q92796 817 aa12.9□□□□□ -0.34
COPS3-218ENST00000584216 FKBP10Q96AY3 582 aa12.9□□□□□ -0.34
COPS3-218ENST00000584216 CNDP1Q96KN2 507 aa12.9□□□□□ -0.34
COPS3-218ENST00000584216 MRGPRX2Q96LB1 330 aa12.9□□□□□ -0.34
COPS3-218ENST00000584216 FCRL5Q96RD9 977 aa12.9□□□□□ -0.34
COPS3-218ENST00000584216 KLHL25Q9H0H3 589 aa12.9□□□□□ -0.34
COPS3-218ENST00000584216 DEF6Q9H4E7 631 aa12.9□□□□□ -0.34
COPS3-218ENST00000584216 MRM3Q9HC36 420 aaKnown RBP12.9□□□□□ -0.34
COPS3-218ENST00000584216 ZBTB20Q9HC78 741 aaPredicted RBP12.9□□□□□ -0.34
COPS3-218ENST00000584216 CHST11Q9NPF2 352 aa12.9□□□□□ -0.34
COPS3-218ENST00000584216 SUCOQ9UBS9 1254 aaKnown RBP12.9□□□□□ -0.34
COPS3-218ENST00000584216 C5orf60A6NFR6 353 aa12.89□□□□□ -0.35
COPS3-218ENST00000584216 C3orf70A6NLC5 250 aaPredicted RBP12.89□□□□□ -0.35
COPS3-218ENST00000584216 KDM1AO60341 852 aa12.89□□□□□ -0.35
COPS3-218ENST00000584216 UMODP07911 640 aa12.89□□□□□ -0.35
COPS3-218ENST00000584216 GSTM1P09488 218 aa12.89□□□□□ -0.35
COPS3-218ENST00000584216 ATP1B2P14415 290 aaPredicted RBP12.89□□□□□ -0.35
COPS3-218ENST00000584216 CD68P34810 354 aaPredicted RBP12.89□□□□□ -0.35
COPS3-218ENST00000584216 SHMT2P34897 504 aa12.89□□□□□ -0.35
COPS3-218ENST00000584216 GSTM4Q03013 218 aa12.89□□□□□ -0.35
COPS3-218ENST00000584216 TFDP2Q14188 446 aa12.89□□□□□ -0.35
COPS3-218ENST00000584216 MESDQ14696 234 aa12.89□□□□□ -0.35
COPS3-218ENST00000584216 NR1I3Q14994 352 aa12.89□□□□□ -0.35
COPS3-218ENST00000584216 TAF1AQ15573 450 aaPredicted RBP12.89□□□□□ -0.35
COPS3-218ENST00000584216 LRRC38Q5VT99 294 aa12.89□□□□□ -0.35
COPS3-218ENST00000584216 MTFR2Q6P444 385 aa12.89□□□□□ -0.35
COPS3-218ENST00000584216 ADGRF3Q8IZF5 1079 aa12.89□□□□□ -0.35
COPS3-218ENST00000584216 NAP1L5Q96NT1 182 aaPredicted RBP12.89□□□□□ -0.35
COPS3-218ENST00000584216 COPS8Q99627 209 aa12.89□□□□□ -0.35
COPS3-218ENST00000584216 SLX1AQ9BQ83 275 aa12.89□□□□□ -0.35
COPS3-218ENST00000584216 HGH1Q9BTY7 390 aa12.89□□□□□ -0.35
COPS3-218ENST00000584216 LHPPQ9H008 270 aa12.89□□□□□ -0.35
COPS3-218ENST00000584216 OR52A5Q9H2C5 316 aa12.89□□□□□ -0.35
COPS3-218ENST00000584216 WDR54Q9H977 334 aa12.89□□□□□ -0.35
COPS3-218ENST00000584216 COG4Q9H9E3 785 aa12.89□□□□□ -0.35
COPS3-218ENST00000584216 OLAHQ9NV23 265 aa12.89□□□□□ -0.35
COPS3-218ENST00000584216 DDX56Q9NY93 547 aaKnown RBP12.89□□□□□ -0.35
COPS3-218ENST00000584216 DHCR7Q9UBM7 475 aaKnown RBP12.89□□□□□ -0.35
COPS3-218ENST00000584216 CDC23Q9UJX2 597 aa12.89□□□□□ -0.35
COPS3-218ENST00000584216 FBXL4Q9UKA2 621 aa12.89□□□□□ -0.35
COPS3-218ENST00000584216 CDYLQ9Y232 598 aa12.89□□□□□ -0.35
COPS3-218ENST00000584216 FBN2P35556 2912 aa12.88□□□□□ -0.35
COPS3-218ENST00000584216 OTOGQ6ZRI0 2925 aa12.88□□□□□ -0.35
COPS3-218ENST00000584216 H3BMH7 237 aa12.88□□□□□ -0.35
COPS3-218ENST00000584216 ALBP02768 609 aa12.88□□□□□ -0.35
COPS3-218ENST00000584216 ATXN8OSP0DMR3 200 aa12.88□□□□□ -0.35
COPS3-218ENST00000584216 ITGALP20701 1170 aa12.88□□□□□ -0.35
COPS3-218ENST00000584216 ITGAXP20702 1163 aa12.88□□□□□ -0.35
COPS3-218ENST00000584216 ARHGAP25P42331 645 aa12.88□□□□□ -0.35
COPS3-218ENST00000584216 ARSFP54793 590 aa12.88□□□□□ -0.35
COPS3-218ENST00000584216 OTUD4Q01804 1114 aaKnown RBP12.88□□□□□ -0.35
COPS3-218ENST00000584216 WASHC5Q12768 1159 aa12.88□□□□□ -0.35
COPS3-218ENST00000584216 BOP1Q14137 746 aaKnown RBP12.88□□□□□ -0.35
COPS3-218ENST00000584216 SLC9A5Q14940 896 aa12.88□□□□□ -0.35
COPS3-218ENST00000584216 FAM182AQ5T1J6 154 aa12.88□□□□□ -0.35
COPS3-218ENST00000584216 RPUSD3Q6P087 351 aaKnown RBP12.88□□□□□ -0.35
COPS3-218ENST00000584216 PID1Q7Z2X4 250 aa12.88□□□□□ -0.35
COPS3-218ENST00000584216 PARP9Q8IXQ6 854 aa12.88□□□□□ -0.35
COPS3-218ENST00000584216 LILRA3Q8N6C8 439 aaPredicted RBP12.88□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 55.6 ms