RNA–Protein interactions for RNA: ENST00000583363.5

CDK5RAP3-228, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 4

Gene CDK5RAP3, Length 558 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-228ENST00000583363 SLC17A7Q9P2U7 560 aa15.97■□□□□ 0.15
CDK5RAP3-228ENST00000583363 TBC1D29Q9UFV1 150 aa15.97■□□□□ 0.15
CDK5RAP3-228ENST00000583363 TDRD6O60522 2096 aaKnown RBP15.97■□□□□ 0.15
CDK5RAP3-228ENST00000583363 NPEPPSL1A6NEC2 478 aa15.96■□□□□ 0.15
CDK5RAP3-228ENST00000583363 PATE3B3GLJ2 98 aa15.96■□□□□ 0.15
CDK5RAP3-228ENST00000583363 BTN3A1O00481 513 aa15.96■□□□□ 0.15
CDK5RAP3-228ENST00000583363 SNX2O60749 519 aa15.96■□□□□ 0.15
CDK5RAP3-228ENST00000583363 PSIP1O75475 530 aaKnown RBP15.96■□□□□ 0.15
CDK5RAP3-228ENST00000583363 ZWINTO95229 277 aa15.96■□□□□ 0.15
CDK5RAP3-228ENST00000583363 PROCP04070 461 aa15.96■□□□□ 0.15
CDK5RAP3-228ENST00000583363 CFIP05156 583 aa15.96■□□□□ 0.15
CDK5RAP3-228ENST00000583363 C8GP07360 202 aa15.96■□□□□ 0.15
CDK5RAP3-228ENST00000583363 NR1D1P20393 614 aa15.96■□□□□ 0.15
CDK5RAP3-228ENST00000583363 MPLP40238 635 aa15.96■□□□□ 0.15
CDK5RAP3-228ENST00000583363 ETV4P43268 484 aa15.96■□□□□ 0.15
CDK5RAP3-228ENST00000583363 MAPK9P45984 424 aa15.96■□□□□ 0.15
CDK5RAP3-228ENST00000583363 SHC2P98077 582 aa15.96■□□□□ 0.15
CDK5RAP3-228ENST00000583363 GRIK2Q13002 908 aa15.96■□□□□ 0.15
CDK5RAP3-228ENST00000583363 CLCA4Q14CN2 919 aa15.96■□□□□ 0.15
CDK5RAP3-228ENST00000583363 ELOCQ15369 112 aa15.96■□□□□ 0.15
CDK5RAP3-228ENST00000583363 SHBQ15464 509 aa15.96■□□□□ 0.15
CDK5RAP3-228ENST00000583363 TCEA2Q15560 299 aa15.96■□□□□ 0.15
CDK5RAP3-228ENST00000583363 TSNQ15631 228 aaKnown RBP15.96■□□□□ 0.15
CDK5RAP3-228ENST00000583363 UAP1L1Q3KQV9 507 aa15.96■□□□□ 0.15
CDK5RAP3-228ENST00000583363 TRIM61Q5EBN2 209 aa15.96■□□□□ 0.15
CDK5RAP3-228ENST00000583363 SLC30A9Q6PML9 568 aa15.96■□□□□ 0.15
CDK5RAP3-228ENST00000583363 SBSNQ6UWP8 590 aa15.96■□□□□ 0.15
CDK5RAP3-228ENST00000583363 TAF8Q7Z7C8 310 aa15.96■□□□□ 0.15
CDK5RAP3-228ENST00000583363 PDZD3Q86UT5 571 aa15.96■□□□□ 0.15
CDK5RAP3-228ENST00000583363 SDR16C5Q8N3Y7 309 aa15.96■□□□□ 0.15
CDK5RAP3-228ENST00000583363 SPDYE1Q8NFV5 336 aaPredicted RBP15.96■□□□□ 0.15
CDK5RAP3-228ENST00000583363 CFAP61Q8NHU2 1237 aa15.96■□□□□ 0.15
CDK5RAP3-228ENST00000583363 LMX1AQ8TE12 382 aa15.96■□□□□ 0.15
CDK5RAP3-228ENST00000583363 SKA2Q8WVK7 121 aaPredicted RBP15.96■□□□□ 0.15
CDK5RAP3-228ENST00000583363 DLG3Q92796 817 aa15.96■□□□□ 0.15
CDK5RAP3-228ENST00000583363 RMDN2Q96LZ7 410 aa15.96■□□□□ 0.15
CDK5RAP3-228ENST00000583363 FOPNLQ96NB1 174 aa15.96■□□□□ 0.15
CDK5RAP3-228ENST00000583363 FAM111AQ96PZ2 611 aa15.96■□□□□ 0.15
CDK5RAP3-228ENST00000583363 ATOH8Q96SQ7 321 aa15.96■□□□□ 0.15
CDK5RAP3-228ENST00000583363 INSM2Q96T92 566 aaPredicted RBP15.96■□□□□ 0.15
CDK5RAP3-228ENST00000583363 SELENOSQ9BQE4 189 aa15.96■□□□□ 0.15
CDK5RAP3-228ENST00000583363 SLC12A9Q9BXP2 914 aa15.96■□□□□ 0.15
CDK5RAP3-228ENST00000583363 MRPL46Q9H2W6 279 aaKnown RBP15.96■□□□□ 0.15
CDK5RAP3-228ENST00000583363 SCHIP1Q9P0W5 487 aaPredicted RBP15.96■□□□□ 0.15
CDK5RAP3-228ENST00000583363 TAAR2Q9P1P5 351 aa15.96■□□□□ 0.15
CDK5RAP3-228ENST00000583363 ADAMTS6Q9UKP5 1117 aa15.96■□□□□ 0.15
CDK5RAP3-228ENST00000583363 PSMD13Q9UNM6 376 aa15.96■□□□□ 0.15
CDK5RAP3-228ENST00000583363 CACNA1EQ15878 2313 aa15.95■□□□□ 0.14
CDK5RAP3-228ENST00000583363 A6NCN8 305 aa15.95■□□□□ 0.14
CDK5RAP3-228ENST00000583363 IFRD1O00458 451 aaPredicted RBP15.95■□□□□ 0.14
CDK5RAP3-228ENST00000583363 DFNA5O60443 496 aa15.95■□□□□ 0.14
CDK5RAP3-228ENST00000583363 KERAO60938 352 aa15.95■□□□□ 0.14
CDK5RAP3-228ENST00000583363 PIAS2O75928 621 aa15.95■□□□□ 0.14
CDK5RAP3-228ENST00000583363 EML2O95834 649 aa15.95■□□□□ 0.14
CDK5RAP3-228ENST00000583363 IRX4P78413 519 aa15.95■□□□□ 0.14
CDK5RAP3-228ENST00000583363 BNIP3Q12983 259 aa15.95■□□□□ 0.14
CDK5RAP3-228ENST00000583363 SEPT7Q16181 437 aaKnown RBP15.95■□□□□ 0.14
CDK5RAP3-228ENST00000583363 HLA-BQ31612 363 aa15.95■□□□□ 0.14
CDK5RAP3-228ENST00000583363 TCEAL6Q6IPX3 200 aa15.95■□□□□ 0.14
CDK5RAP3-228ENST00000583363 IL27RAQ6UWB1 636 aa15.95■□□□□ 0.14
CDK5RAP3-228ENST00000583363 UNC5DQ6UXZ4 953 aa15.95■□□□□ 0.14
CDK5RAP3-228ENST00000583363 UBE2R2Q712K3 238 aaPredicted RBP15.95■□□□□ 0.14
CDK5RAP3-228ENST00000583363 ADAMTSL2Q86TH1 951 aa15.95■□□□□ 0.14
CDK5RAP3-228ENST00000583363 GKN2Q86XP6 184 aa15.95■□□□□ 0.14
CDK5RAP3-228ENST00000583363 ANKRD42Q8N9B4 389 aa15.95■□□□□ 0.14
CDK5RAP3-228ENST00000583363 ARMC2Q8NEN0 867 aa15.95■□□□□ 0.14
CDK5RAP3-228ENST00000583363 MDM1Q8TC05 714 aa15.95■□□□□ 0.14
CDK5RAP3-228ENST00000583363 TFGQ92734 400 aaPredicted RBP15.95■□□□□ 0.14
CDK5RAP3-228ENST00000583363 TCEAL3Q969E4 200 aa15.95■□□□□ 0.14
CDK5RAP3-228ENST00000583363 PARVBQ9HBI1 364 aa15.95■□□□□ 0.14
CDK5RAP3-228ENST00000583363 FSCN3Q9NQT6 498 aa15.95■□□□□ 0.14
CDK5RAP3-228ENST00000583363 XPR1Q9UBH6 696 aa15.95■□□□□ 0.14
CDK5RAP3-228ENST00000583363 A0A1B0GTQ1 180 aa15.94■□□□□ 0.14
CDK5RAP3-228ENST00000583363 PDZK1P1A8MUH7 402 aa15.94■□□□□ 0.14
CDK5RAP3-228ENST00000583363 ARHGAP33O14559 1287 aa15.94■□□□□ 0.14
CDK5RAP3-228ENST00000583363 YY2O15391 372 aa15.94■□□□□ 0.14
CDK5RAP3-228ENST00000583363 AQP9O43315 295 aa15.94■□□□□ 0.14
CDK5RAP3-228ENST00000583363 KCNK5O95279 499 aa15.94■□□□□ 0.14
CDK5RAP3-228ENST00000583363 C1orf105O95561 183 aa15.94■□□□□ 0.14
CDK5RAP3-228ENST00000583363 SYPP08247 313 aa15.94■□□□□ 0.14
CDK5RAP3-228ENST00000583363 SLC35G4P0C7Q5 338 aa15.94■□□□□ 0.14
CDK5RAP3-228ENST00000583363 DHRS4L1P0CG22 281 aa15.94■□□□□ 0.14
CDK5RAP3-228ENST00000583363 OAS2P29728 719 aaKnown RBP15.94■□□□□ 0.14
CDK5RAP3-228ENST00000583363 ARRB1P49407 418 aaPredicted RBP15.94■□□□□ 0.14
CDK5RAP3-228ENST00000583363 WDR4P57081 412 aaKnown RBP15.94■□□□□ 0.14
CDK5RAP3-228ENST00000583363 SP140Q13342 867 aa15.94■□□□□ 0.14
CDK5RAP3-228ENST00000583363 RPE65Q16518 533 aa15.94■□□□□ 0.14
CDK5RAP3-228ENST00000583363 PPP1R3AQ16821 1122 aa15.94■□□□□ 0.14
CDK5RAP3-228ENST00000583363 IYDQ6PHW0 289 aa15.94■□□□□ 0.14
CDK5RAP3-228ENST00000583363 GPSM1Q86YR5 675 aa15.94■□□□□ 0.14
CDK5RAP3-228ENST00000583363 PHC3Q8NDX5 983 aa15.94■□□□□ 0.14
CDK5RAP3-228ENST00000583363 ZNF548Q8NEK5 533 aaPredicted RBP15.94■□□□□ 0.14
CDK5RAP3-228ENST00000583363 C12orf66Q96MD2 445 aa15.94■□□□□ 0.14
CDK5RAP3-228ENST00000583363 RDH14Q9HBH5 336 aa15.94■□□□□ 0.14
CDK5RAP3-228ENST00000583363 NKIRAS1Q9NYS0 192 aa15.94■□□□□ 0.14
CDK5RAP3-228ENST00000583363 CPSF2Q9P2I0 782 aaKnown RBP15.94■□□□□ 0.14
CDK5RAP3-228ENST00000583363 RNF112Q9ULX5 631 aa15.94■□□□□ 0.14
CDK5RAP3-228ENST00000583363 PDE10AQ9Y233 779 aa15.94■□□□□ 0.14
CDK5RAP3-228ENST00000583363 OARD1Q9Y530 152 aa15.94■□□□□ 0.14
CDK5RAP3-228ENST00000583363 CSNK1G3Q9Y6M4 447 aa15.94■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms