RNA–Protein interactions for RNA: ENST00000582453.5

MSI2-215, Transcript of musashi RNA binding protein 2, human

TSL 3

Gene MSI2, Length 496 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
MSI2-215	ENST00000582453	RARG	P13631	454 aa		3.17	□□□□□ -1.9
MSI2-215	ENST00000582453	PTPN2	P17706	415 aa		3.17	□□□□□ -1.9
MSI2-215	ENST00000582453	EDN2	P20800	178 aa		3.17	□□□□□ -1.9
MSI2-215	ENST00000582453	RPA1	P27694	616 aa		3.17	□□□□□ -1.9
MSI2-215	ENST00000582453	RYK	P34925	604 aa		3.17	□□□□□ -1.9
MSI2-215	ENST00000582453	RFC2	P35250	354 aa		3.17	□□□□□ -1.9
MSI2-215	ENST00000582453	KRT20	P35900	424 aa		3.17	□□□□□ -1.9
MSI2-215	ENST00000582453	QARS	P47897	775 aa	Known RBP	3.17	□□□□□ -1.9
MSI2-215	ENST00000582453	CEBPZ	Q03701	1054 aa	Known RBP	3.17	□□□□□ -1.9
MSI2-215	ENST00000582453	CSTF3	Q12996	717 aa	Known RBP	3.17	□□□□□ -1.9
MSI2-215	ENST00000582453	CHAF1B	Q13112	559 aa		3.17	□□□□□ -1.9
MSI2-215	ENST00000582453	AIMP2	Q13155	320 aa	Known RBP	3.17	□□□□□ -1.9
MSI2-215	ENST00000582453	CAPS	Q13938	189 aa		3.17	□□□□□ -1.9
MSI2-215	ENST00000582453	CTTN	Q14247	550 aa	Known RBP	3.17	□□□□□ -1.9
MSI2-215	ENST00000582453	PLCB4	Q15147	1175 aa		3.17	□□□□□ -1.9
MSI2-215	ENST00000582453	RNPS1	Q15287	305 aa	Known RBP	3.17	□□□□□ -1.9
MSI2-215	ENST00000582453	SERTAD4-AS1	Q5TG53	156 aa		3.17	□□□□□ -1.9
MSI2-215	ENST00000582453	ZNF324B	Q6AW86	544 aa	Predicted RBP	3.17	□□□□□ -1.9
MSI2-215	ENST00000582453	NADSYN1	Q6IA69	706 aa		3.17	□□□□□ -1.9
MSI2-215	ENST00000582453	RPUSD3	Q6P087	351 aa	Known RBP	3.17	□□□□□ -1.9
MSI2-215	ENST00000582453	CXCL17	Q6UXB2	119 aa		3.17	□□□□□ -1.9
MSI2-215	ENST00000582453	MOB3C	Q70IA8	216 aa		3.17	□□□□□ -1.9
MSI2-215	ENST00000582453	OTUD6A	Q7L8S5	288 aa		3.17	□□□□□ -1.9
MSI2-215	ENST00000582453	MIER3	Q7Z3K6	550 aa		3.17	□□□□□ -1.9
MSI2-215	ENST00000582453	TADA2B	Q86TJ2	420 aa		3.17	□□□□□ -1.9
MSI2-215	ENST00000582453	RBM23	Q86U06	439 aa	Known RBP	3.17	□□□□□ -1.9
MSI2-215	ENST00000582453	SERINC5	Q86VE9	423 aa		3.17	□□□□□ -1.9
MSI2-215	ENST00000582453	FJX1	Q86VR8	437 aa		3.17	□□□□□ -1.9
MSI2-215	ENST00000582453	CCDC60	Q8IWA6	550 aa	Predicted RBP	3.17	□□□□□ -1.9
MSI2-215	ENST00000582453	ADGRF2	Q8IZF7	708 aa		3.17	□□□□□ -1.9
MSI2-215	ENST00000582453	FRMD1	Q8N878	549 aa		3.17	□□□□□ -1.9
MSI2-215	ENST00000582453	GPT2	Q8TD30	523 aa		3.17	□□□□□ -1.9
MSI2-215	ENST00000582453	PSPC1	Q8WXF1	523 aa	Known RBP	3.17	□□□□□ -1.9
MSI2-215	ENST00000582453	FAM149B1	Q96BN6	582 aa		3.17	□□□□□ -1.9
MSI2-215	ENST00000582453	FEM1C	Q96JP0	617 aa		3.17	□□□□□ -1.9
MSI2-215	ENST00000582453	WDFY2	Q96P53	400 aa		3.17	□□□□□ -1.9
MSI2-215	ENST00000582453	CTAGE1	Q96RT6	745 aa		3.17	□□□□□ -1.9
MSI2-215	ENST00000582453	USP28	Q96RU2	1077 aa		3.17	□□□□□ -1.9
MSI2-215	ENST00000582453	TIPIN	Q9BVW5	301 aa		3.17	□□□□□ -1.9
MSI2-215	ENST00000582453	TXLNGY	Q9BZA5	131 aa		3.17	□□□□□ -1.9
MSI2-215	ENST00000582453	CCSER1	Q9C0I3	900 aa		3.17	□□□□□ -1.9
MSI2-215	ENST00000582453	NT5C3A	Q9H0P0	336 aa		3.17	□□□□□ -1.9
MSI2-215	ENST00000582453	SLCO5A1	Q9H2Y9	848 aa		3.17	□□□□□ -1.9
MSI2-215	ENST00000582453	CUEDC2	Q9H467	287 aa		3.17	□□□□□ -1.9
MSI2-215	ENST00000582453	POLR1B	Q9H9Y6	1135 aa		3.17	□□□□□ -1.9
MSI2-215	ENST00000582453	MAGEF1	Q9HAY2	307 aa		3.17	□□□□□ -1.9
MSI2-215	ENST00000582453	CLK4	Q9HAZ1	481 aa	Known RBP	3.17	□□□□□ -1.9
MSI2-215	ENST00000582453	ZNF302	Q9NR11	478 aa		3.17	□□□□□ -1.9
MSI2-215	ENST00000582453	NRBP2	Q9NSY0	501 aa		3.17	□□□□□ -1.9
MSI2-215	ENST00000582453	TMEM51	Q9NW97	253 aa		3.17	□□□□□ -1.9
MSI2-215	ENST00000582453	EHD2	Q9NZN4	543 aa		3.17	□□□□□ -1.9
MSI2-215	ENST00000582453	CHMP5	Q9NZZ3	219 aa		3.17	□□□□□ -1.9
MSI2-215	ENST00000582453	LRWD1	Q9UFC0	647 aa		3.17	□□□□□ -1.9
MSI2-215	ENST00000582453	GIMAP2	Q9UG22	337 aa		3.17	□□□□□ -1.9
MSI2-215	ENST00000582453	TBX21	Q9UL17	535 aa		3.17	□□□□□ -1.9
MSI2-215	ENST00000582453	PCDHGB5	Q9Y5G0	923 aa		3.17	□□□□□ -1.9
MSI2-215	ENST00000582453	DDX49	Q9Y6V7	483 aa	Known RBP	3.17	□□□□□ -1.9
MSI2-215	ENST00000582453	RBBP6	Q7Z6E9	1792 aa	Known RBP	3.17	□□□□□ -1.9
MSI2-215	ENST00000582453	HTT	P42858	3142 aa		3.17	□□□□□ -1.9
MSI2-215	ENST00000582453	GRIN2D	O15399	1336 aa		3.17	□□□□□ -1.9
MSI2-215	ENST00000582453	PCNT	O95613	3336 aa		3.16	□□□□□ -1.9
MSI2-215	ENST00000582453	FAM237B	A0A1B0GVD1	139 aa		3.16	□□□□□ -1.9
MSI2-215	ENST00000582453	CDRT15L2	A8MXV6	281 aa		3.16	□□□□□ -1.9
MSI2-215	ENST00000582453	SERPINI2	O75830	405 aa		3.16	□□□□□ -1.9
MSI2-215	ENST00000582453	PAPSS2	O95340	614 aa	Predicted RBP	3.16	□□□□□ -1.9
MSI2-215	ENST00000582453	C22orf31	O95567	290 aa		3.16	□□□□□ -1.9
MSI2-215	ENST00000582453	SMIM10L2A	P0DMW4	78 aa		3.16	□□□□□ -1.9
MSI2-215	ENST00000582453	SMIM10L2B	P0DMW5	78 aa		3.16	□□□□□ -1.9
MSI2-215	ENST00000582453	FGF3	P11487	239 aa	Predicted RBP	3.16	□□□□□ -1.9
MSI2-215	ENST00000582453	PCNA	P12004	261 aa		3.16	□□□□□ -1.9
MSI2-215	ENST00000582453	SRD5A1	P18405	259 aa		3.16	□□□□□ -1.9
MSI2-215	ENST00000582453	CMA1	P23946	247 aa		3.16	□□□□□ -1.9
MSI2-215	ENST00000582453	NFKBIA	P25963	317 aa		3.16	□□□□□ -1.9
MSI2-215	ENST00000582453	C21orf33	P30042	268 aa	Predicted RBP	3.16	□□□□□ -1.9
MSI2-215	ENST00000582453	YWHAB	P31946	246 aa	Known RBP	3.16	□□□□□ -1.9
MSI2-215	ENST00000582453	MXI1	P50539	228 aa		3.16	□□□□□ -1.9
MSI2-215	ENST00000582453	SEC61A1	P61619	476 aa	Known RBP	3.16	□□□□□ -1.9
MSI2-215	ENST00000582453	PSMC6	P62333	389 aa		3.16	□□□□□ -1.9
MSI2-215	ENST00000582453	BEX3	Q00994	111 aa		3.16	□□□□□ -1.9
MSI2-215	ENST00000582453	PRKCE	Q02156	737 aa		3.16	□□□□□ -1.9
MSI2-215	ENST00000582453	NIPAL4	Q0D2K0	466 aa		3.16	□□□□□ -1.9
MSI2-215	ENST00000582453	KIF5A	Q12840	1032 aa		3.16	□□□□□ -1.9
MSI2-215	ENST00000582453	STK4	Q13043	487 aa		3.16	□□□□□ -1.9
MSI2-215	ENST00000582453	ITGA7	Q13683	1181 aa		3.16	□□□□□ -1.9
MSI2-215	ENST00000582453	STK38	Q15208	465 aa		3.16	□□□□□ -1.9
MSI2-215	ENST00000582453	IL17A	Q16552	155 aa		3.16	□□□□□ -1.9
MSI2-215	ENST00000582453	GSTA3	Q16772	222 aa		3.16	□□□□□ -1.9
MSI2-215	ENST00000582453	RAB41	Q5JT25	222 aa		3.16	□□□□□ -1.9
MSI2-215	ENST00000582453	MARCH8	Q5T0T0	291 aa		3.16	□□□□□ -1.9
MSI2-215	ENST00000582453	CFAP58	Q5T655	872 aa		3.16	□□□□□ -1.9
MSI2-215	ENST00000582453	RESP18	Q5W5W9	173 aa		3.16	□□□□□ -1.9
MSI2-215	ENST00000582453	KRT79	Q5XKE5	535 aa		3.16	□□□□□ -1.9
MSI2-215	ENST00000582453	ADAL	Q6DHV7	355 aa		3.16	□□□□□ -1.9
MSI2-215	ENST00000582453	JADE1	Q6IE81	842 aa		3.16	□□□□□ -1.9
MSI2-215	ENST00000582453	CAPRIN2	Q6IMN6	1127 aa	Known RBP	3.16	□□□□□ -1.9
MSI2-215	ENST00000582453	SLC30A6	Q6NXT4	461 aa		3.16	□□□□□ -1.9
MSI2-215	ENST00000582453	KLHL35	Q6PF15	583 aa		3.16	□□□□□ -1.9
MSI2-215	ENST00000582453	SARM1	Q6SZW1	724 aa		3.16	□□□□□ -1.9
MSI2-215	ENST00000582453	ANO5	Q75V66	913 aa		3.16	□□□□□ -1.9
MSI2-215	ENST00000582453	TBC1D26	Q86UD7	250 aa		3.16	□□□□□ -1.9

Retrieved 100 of 20,778 RNA–protein pairs in 48.6 ms