RNA–Protein interactions for RNA: ENST00000582252.1

CCDC47-204, Transcript of coiled-coil domain containing 47, humanhuman

TSL 2 BASIC

Gene CCDC47, Length 1,719 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC47-204ENST00000582252 SLC32A1Q9H598 525 aa22.18■■□□□ 1.14
CCDC47-204ENST00000582252 PACSIN3Q9UKS6 424 aa22.18■■□□□ 1.14
CCDC47-204ENST00000582252 PSMD13Q9UNM6 376 aa22.18■■□□□ 1.14
CCDC47-204ENST00000582252 UNC80Q8N2C7 3258 aa22.18■■□□□ 1.14
CCDC47-204ENST00000582252 E7ENX8 843 aa22.17■■□□□ 1.14
CCDC47-204ENST00000582252 WNT9AO14904 365 aa22.17■■□□□ 1.14
CCDC47-204ENST00000582252 RGS14O43566 566 aa22.17■■□□□ 1.14
CCDC47-204ENST00000582252 SLC22A3O75751 556 aa22.17■■□□□ 1.14
CCDC47-204ENST00000582252 MAPK9P45984 424 aa22.17■■□□□ 1.14
CCDC47-204ENST00000582252 AP1S2P56377 157 aa22.17■■□□□ 1.14
CCDC47-204ENST00000582252 NME5P56597 212 aa22.17■■□□□ 1.14
CCDC47-204ENST00000582252 EMX2Q04743 252 aa22.17■■□□□ 1.14
CCDC47-204ENST00000582252 MAD2L1Q13257 205 aaPredicted RBP22.17■■□□□ 1.14
CCDC47-204ENST00000582252 SCIMPQ6UWF3 145 aa22.17■■□□□ 1.14
CCDC47-204ENST00000582252 DEFB123Q8N688 67 aa22.17■■□□□ 1.14
CCDC47-204ENST00000582252 SNX31Q8N9S9 440 aa22.17■■□□□ 1.14
CCDC47-204ENST00000582252 OR2T11Q8NH01 316 aa22.17■■□□□ 1.14
CCDC47-204ENST00000582252 ASB11Q8WXH4 323 aa22.17■■□□□ 1.14
CCDC47-204ENST00000582252 GLYATL1Q969I3 302 aa22.17■■□□□ 1.14
CCDC47-204ENST00000582252 AP2M1Q96CW1 435 aa22.17■■□□□ 1.14
CCDC47-204ENST00000582252 SPDL1Q96EA4 605 aa22.17■■□□□ 1.14
CCDC47-204ENST00000582252 ZNF184Q99676 751 aaPredicted RBP22.17■■□□□ 1.14
CCDC47-204ENST00000582252 HEBP1Q9NRV9 189 aa22.17■■□□□ 1.14
CCDC47-204ENST00000582252 C6orf203Q9P0P8 240 aaPredicted RBP22.17■■□□□ 1.14
CCDC47-204ENST00000582252 TMEM181Q9P2C4 612 aa22.17■■□□□ 1.14
CCDC47-204ENST00000582252 PDE10AQ9Y233 779 aa22.17■■□□□ 1.14
CCDC47-204ENST00000582252 MUC22E2RYF6 1773 aaPredicted RBP22.17■■□□□ 1.14
CCDC47-204ENST00000582252 OTOL1A6NHN0 477 aaPredicted RBP22.17■■□□□ 1.14
CCDC47-204ENST00000582252 PRRT4C9JH25 899 aa22.17■■□□□ 1.14
CCDC47-204ENST00000582252 DIO3P55073 304 aa22.17■■□□□ 1.14
CCDC47-204ENST00000582252 TRIM25Q14258 630 aaKnown RBP22.17■■□□□ 1.14
CCDC47-204ENST00000582252 ELAVL3Q14576 367 aaKnown RBP22.17■■□□□ 1.14
CCDC47-204ENST00000582252 NR6A1Q15406 480 aa22.17■■□□□ 1.14
CCDC47-204ENST00000582252 GAB4Q2WGN9 574 aa22.17■■□□□ 1.14
CCDC47-204ENST00000582252 SPATS1Q496A3 300 aa22.17■■□□□ 1.14
CCDC47-204ENST00000582252 CYP2U1Q7Z449 544 aa22.17■■□□□ 1.14
CCDC47-204ENST00000582252 ZNF366Q8N895 744 aa22.17■■□□□ 1.14
CCDC47-204ENST00000582252 DCBLD1Q8N8Z6 715 aa22.17■■□□□ 1.14
CCDC47-204ENST00000582252 MCOLN3Q8TDD5 553 aa22.17■■□□□ 1.14
CCDC47-204ENST00000582252 HLA-CQ95604 372 aa22.17■■□□□ 1.14
CCDC47-204ENST00000582252 NXPE3Q969Y0 559 aa22.17■■□□□ 1.14
CCDC47-204ENST00000582252 MAGEB10Q96LZ2 347 aaPredicted RBP22.17■■□□□ 1.14
CCDC47-204ENST00000582252 RPP25Q9BUL9 199 aaKnown RBP22.17■■□□□ 1.14
CCDC47-204ENST00000582252 F5P12259 2224 aa22.16■■□□□ 1.14
CCDC47-204ENST00000582252 A0A1W2PP18 115 aa22.16■■□□□ 1.14
CCDC47-204ENST00000582252 SLC6A11P48066 632 aa22.16■■□□□ 1.14
CCDC47-204ENST00000582252 RCAN2Q14206 197 aa22.16■■□□□ 1.14
CCDC47-204ENST00000582252 FBXL19Q6PCT2 694 aa22.16■■□□□ 1.14
CCDC47-204ENST00000582252 Q6ZSR9 355 aa22.16■■□□□ 1.14
CCDC47-204ENST00000582252 MINDY1Q8N5J2 469 aa22.16■■□□□ 1.14
CCDC47-204ENST00000582252 BHLHE22Q8NFJ8 381 aaPredicted RBP22.16■■□□□ 1.14
CCDC47-204ENST00000582252 PIP4K2CQ8TBX8 421 aa22.16■■□□□ 1.14
CCDC47-204ENST00000582252 DYRK4Q9NR20 520 aa22.16■■□□□ 1.14
CCDC47-204ENST00000582252 FAM234BA2RU67 622 aa22.15■■□□□ 1.14
CCDC47-204ENST00000582252 FADS2P1A8MWK0 482 aa22.15■■□□□ 1.14
CCDC47-204ENST00000582252 IFRD1O00458 451 aaPredicted RBP22.15■■□□□ 1.14
CCDC47-204ENST00000582252 ATG13O75143 517 aa22.15■■□□□ 1.14
CCDC47-204ENST00000582252 CAPN3P20807 821 aa22.15■■□□□ 1.14
CCDC47-204ENST00000582252 ITPRIPL2Q3MIP1 535 aa22.15■■□□□ 1.14
CCDC47-204ENST00000582252 POM121L1PQ3SYA9 428 aa22.15■■□□□ 1.14
CCDC47-204ENST00000582252 VPS26BQ4G0F5 336 aa22.15■■□□□ 1.14
CCDC47-204ENST00000582252 SYTL3Q4VX76 610 aa22.15■■□□□ 1.14
CCDC47-204ENST00000582252 LAYNQ6UX15 382 aa22.15■■□□□ 1.14
CCDC47-204ENST00000582252 ZNF765Q7L2R6 523 aa22.15■■□□□ 1.14
CCDC47-204ENST00000582252 DSG4Q86SJ6 1040 aa22.15■■□□□ 1.14
CCDC47-204ENST00000582252 PLCD3Q8N3E9 789 aa22.15■■□□□ 1.14
CCDC47-204ENST00000582252 RNF148Q8N7C7 305 aa22.15■■□□□ 1.14
CCDC47-204ENST00000582252 ZCCHC2Q9C0B9 1178 aaKnown RBP22.15■■□□□ 1.14
CCDC47-204ENST00000582252 LEF1Q9UJU2 399 aaPredicted RBP22.15■■□□□ 1.14
CCDC47-204ENST00000582252 LRCH1Q9Y2L9 728 aa22.15■■□□□ 1.14
CCDC47-204ENST00000582252 CCDC154A6NI56 674 aa22.14■■□□□ 1.14
CCDC47-204ENST00000582252 GFYI3L273 518 aa22.14■■□□□ 1.14
CCDC47-204ENST00000582252 ARNTLO00327 626 aa22.14■■□□□ 1.14
CCDC47-204ENST00000582252 ACOT8O14734 319 aa22.14■■□□□ 1.14
CCDC47-204ENST00000582252 LSM1O15116 133 aaKnown RBP22.14■■□□□ 1.14
CCDC47-204ENST00000582252 MTX2O75431 263 aa22.14■■□□□ 1.14
CCDC47-204ENST00000582252 GJA4P35212 333 aa22.14■■□□□ 1.14
CCDC47-204ENST00000582252 EIF2DP41214 584 aaKnown RBP22.14■■□□□ 1.14
CCDC47-204ENST00000582252 HTR6P50406 440 aa22.14■■□□□ 1.14
CCDC47-204ENST00000582252 POLR2JP52435 117 aaKnown RBP22.14■■□□□ 1.14
CCDC47-204ENST00000582252 C9orf64Q5T6V5 341 aa22.14■■□□□ 1.14
CCDC47-204ENST00000582252 TMEM126BQ8IUX1 230 aa22.14■■□□□ 1.14
CCDC47-204ENST00000582252 SFRP1Q8N474 314 aa22.14■■□□□ 1.14
CCDC47-204ENST00000582252 TERB1Q8NA31 727 aa22.14■■□□□ 1.14
CCDC47-204ENST00000582252 DTD2Q96FN9 168 aa22.14■■□□□ 1.14
CCDC47-204ENST00000582252 PHF7Q9BWX1 381 aaPredicted RBP22.14■■□□□ 1.14
CCDC47-204ENST00000582252 C2CD4DB7Z1M9 353 aa22.14■■□□□ 1.13
CCDC47-204ENST00000582252 ULK1O75385 1050 aa22.14■■□□□ 1.13
CCDC47-204ENST00000582252 CLDN9O95484 217 aa22.14■■□□□ 1.13
CCDC47-204ENST00000582252 KRT6AP02538 564 aa22.14■■□□□ 1.13
CCDC47-204ENST00000582252 KRT6BP04259 564 aa22.14■■□□□ 1.13
CCDC47-204ENST00000582252 GDF5P43026 501 aa22.14■■□□□ 1.13
CCDC47-204ENST00000582252 KRT6CP48668 564 aa22.14■■□□□ 1.13
CCDC47-204ENST00000582252 MS4A2Q01362 244 aa22.14■■□□□ 1.13
CCDC47-204ENST00000582252 SERPINA13PQ6UXR4 307 aa22.14■■□□□ 1.13
CCDC47-204ENST00000582252 RETREG3Q86VR2 466 aa22.14■■□□□ 1.13
CCDC47-204ENST00000582252 GALNT13Q8IUC8 556 aa22.14■■□□□ 1.13
CCDC47-204ENST00000582252 COQ10AQ96MF6 247 aa22.14■■□□□ 1.13
CCDC47-204ENST00000582252 GPATCH1Q9BRR8 931 aaKnown RBP22.14■■□□□ 1.13
CCDC47-204ENST00000582252 C1orf50Q9BV19 199 aa22.14■■□□□ 1.13
Retrieved 100 of 20,778 RNA–protein pairs in 40.2 ms