RNA–Protein interactions for RNA: ENST00000582092.1

SS18-220, Transcript of SS18, nBAF chromatin remodeling complex subunit, humanhuman

TSL 1 (best)

Gene SS18, Length 215 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18-220ENST00000582092 PHTF2Q8N3S3 785 aa9.1□□□□□ -0.95
SS18-220ENST00000582092 CHCHD4Q8N4Q1 142 aa9.1□□□□□ -0.95
SS18-220ENST00000582092 CPSF7Q8N684 471 aaKnown RBP9.1□□□□□ -0.95
SS18-220ENST00000582092 POU5F2Q8N7G0 328 aa9.1□□□□□ -0.95
SS18-220ENST00000582092 TSTD1Q8NFU3 115 aa9.1□□□□□ -0.95
SS18-220ENST00000582092 METTL6Q8TCB7 284 aa9.1□□□□□ -0.95
SS18-220ENST00000582092 MAPK15Q8TD08 544 aa9.1□□□□□ -0.95
SS18-220ENST00000582092 LKAAEAR1Q8TD35 194 aa9.1□□□□□ -0.95
SS18-220ENST00000582092 NAT14Q8WUY8 206 aa9.1□□□□□ -0.95
SS18-220ENST00000582092 TWIST2Q8WVJ9 160 aa9.1□□□□□ -0.95
SS18-220ENST00000582092 ATL1Q8WXF7 558 aa9.1□□□□□ -0.95
SS18-220ENST00000582092 SLC7A6OSQ96CW6 309 aaPredicted RBP9.1□□□□□ -0.95
SS18-220ENST00000582092 PRR11Q96HE9 360 aaPredicted RBP9.1□□□□□ -0.95
SS18-220ENST00000582092 MAGEB10Q96LZ2 347 aaPredicted RBP9.1□□□□□ -0.95
SS18-220ENST00000582092 COQ10AQ96MF6 247 aa9.1□□□□□ -0.95
SS18-220ENST00000582092 ZNF382Q96SR6 550 aa9.1□□□□□ -0.95
SS18-220ENST00000582092 RTKNQ9BST9 563 aa9.1□□□□□ -0.95
SS18-220ENST00000582092 THTPAQ9BU02 230 aa9.1□□□□□ -0.95
SS18-220ENST00000582092 C1QTNF3Q9BXJ4 246 aa9.1□□□□□ -0.95
SS18-220ENST00000582092 MRPL1Q9BYD6 325 aaKnown RBP9.1□□□□□ -0.95
SS18-220ENST00000582092 CD244Q9BZW8 370 aa9.1□□□□□ -0.95
SS18-220ENST00000582092 C1orf21Q9H246 121 aa9.1□□□□□ -0.95
SS18-220ENST00000582092 NOL11Q9H8H0 719 aaKnown RBP9.1□□□□□ -0.95
SS18-220ENST00000582092 IPPKQ9H8X2 491 aa9.1□□□□□ -0.95
SS18-220ENST00000582092 EFCAB1Q9HAE3 211 aa9.1□□□□□ -0.95
SS18-220ENST00000582092 BCAP29Q9UHQ4 241 aa9.1□□□□□ -0.95
SS18-220ENST00000582092 PCTPQ9UKL6 214 aa9.1□□□□□ -0.95
SS18-220ENST00000582092 COQ6Q9Y2Z9 468 aa9.1□□□□□ -0.95
SS18-220ENST00000582092 EML5Q05BV3 1969 aa9.1□□□□□ -0.95
SS18-220ENST00000582092 ZFHX2Q9C0A1 2572 aaPredicted RBP9.09□□□□□ -0.95
SS18-220ENST00000582092 K7EPI3 171 aa9.09□□□□□ -0.95
SS18-220ENST00000582092 K7ESF4 209 aa9.09□□□□□ -0.95
SS18-220ENST00000582092 PSMD12O00232 456 aaPredicted RBP9.09□□□□□ -0.95
SS18-220ENST00000582092 PLK4O00444 970 aa9.09□□□□□ -0.95
SS18-220ENST00000582092 AIM2O14862 343 aa9.09□□□□□ -0.95
SS18-220ENST00000582092 LIN7AO14910 233 aaPredicted RBP9.09□□□□□ -0.95
SS18-220ENST00000582092 PIP5K1BO14986 540 aa9.09□□□□□ -0.95
SS18-220ENST00000582092 AREL1O15033 823 aa9.09□□□□□ -0.95
SS18-220ENST00000582092 AXIN1O15169 862 aa9.09□□□□□ -0.95
SS18-220ENST00000582092 MID1O15344 667 aa9.09□□□□□ -0.95
SS18-220ENST00000582092 VEGFDO43915 354 aa9.09□□□□□ -0.95
SS18-220ENST00000582092 NUAK1O60285 661 aa9.09□□□□□ -0.95
SS18-220ENST00000582092 RASSF9O75901 435 aa9.09□□□□□ -0.95
SS18-220ENST00000582092 OR4F21O95013 312 aa9.09□□□□□ -0.95
SS18-220ENST00000582092 STAMBPO95630 424 aa9.09□□□□□ -0.95
SS18-220ENST00000582092 LINC00032P0C843 101 aa9.09□□□□□ -0.95
SS18-220ENST00000582092 TDGF1P13385 188 aa9.09□□□□□ -0.95
SS18-220ENST00000582092 SDHBP21912 280 aa9.09□□□□□ -0.95
SS18-220ENST00000582092 HSPA7P48741 367 aa9.09□□□□□ -0.95
SS18-220ENST00000582092 DGKEP52429 567 aa9.09□□□□□ -0.95
SS18-220ENST00000582092 INHBCP55103 352 aa9.09□□□□□ -0.95
SS18-220ENST00000582092 AP1S2P56377 157 aa9.09□□□□□ -0.95
SS18-220ENST00000582092 FASTKQ14296 549 aaKnown RBP9.09□□□□□ -0.95
SS18-220ENST00000582092 NAA25Q14CX7 972 aa9.09□□□□□ -0.95
SS18-220ENST00000582092 HERC3Q15034 1050 aa9.09□□□□□ -0.95
SS18-220ENST00000582092 CCDC6Q16204 474 aa9.09□□□□□ -0.95
SS18-220ENST00000582092 IMPG1Q17R60 797 aa9.09□□□□□ -0.95
SS18-220ENST00000582092 USP39Q53GS9 565 aaKnown RBP9.09□□□□□ -0.95
SS18-220ENST00000582092 AGKQ53H12 422 aa9.09□□□□□ -0.95
SS18-220ENST00000582092 FBXO48Q5FWF7 155 aa9.09□□□□□ -0.95
SS18-220ENST00000582092 WASHC2DQ5SRD0 308 aa9.09□□□□□ -0.95
SS18-220ENST00000582092 ZNF648Q5T619 568 aaPredicted RBP9.09□□□□□ -0.95
SS18-220ENST00000582092 KANK2Q63ZY3 851 aa9.09□□□□□ -0.95
SS18-220ENST00000582092 GOLGA7Q7Z5G4 137 aa9.09□□□□□ -0.95
SS18-220ENST00000582092 SYVN1Q86TM6 617 aa9.09□□□□□ -0.95
SS18-220ENST00000582092 SNX32Q86XE0 403 aa9.09□□□□□ -0.95
SS18-220ENST00000582092 SPNS2Q8IVW8 549 aa9.09□□□□□ -0.95
SS18-220ENST00000582092 SCUBE1Q8IWY4 988 aa9.09□□□□□ -0.95
SS18-220ENST00000582092 CDYL2Q8N8U2 506 aa9.09□□□□□ -0.95
SS18-220ENST00000582092 SUMF1Q8NBK3 374 aa9.09□□□□□ -0.95
SS18-220ENST00000582092 PDPRQ8NCN5 879 aa9.09□□□□□ -0.95
SS18-220ENST00000582092 OR2T3Q8NH03 318 aa9.09□□□□□ -0.95
SS18-220ENST00000582092 MAGEC3Q8TD91 643 aa9.09□□□□□ -0.95
SS18-220ENST00000582092 AGAP11Q8TF27 550 aa9.09□□□□□ -0.95
SS18-220ENST00000582092 ESAMQ96AP7 390 aa9.09□□□□□ -0.95
SS18-220ENST00000582092 HIC2Q96JB3 615 aa9.09□□□□□ -0.95
SS18-220ENST00000582092 NSUN5Q96P11 429 aaKnown RBP9.09□□□□□ -0.95
SS18-220ENST00000582092 LENG8Q96PV6 779 aaPredicted RBP9.09□□□□□ -0.95
SS18-220ENST00000582092 ACOX2Q99424 681 aa9.09□□□□□ -0.95
SS18-220ENST00000582092 SLC12A9Q9BXP2 914 aa9.09□□□□□ -0.95
SS18-220ENST00000582092 OR2AG1Q9H205 316 aa9.09□□□□□ -0.95
SS18-220ENST00000582092 SLC32A1Q9H598 525 aa9.09□□□□□ -0.95
SS18-220ENST00000582092 FBRSL1Q9HCM7 1045 aaKnown RBP9.09□□□□□ -0.95
SS18-220ENST00000582092 TRIM39Q9HCM9 518 aa9.09□□□□□ -0.95
SS18-220ENST00000582092 MRPL40Q9NQ50 206 aaKnown RBP9.09□□□□□ -0.95
SS18-220ENST00000582092 TAS2R1Q9NYW7 299 aa9.09□□□□□ -0.95
SS18-220ENST00000582092 EBF1Q9UH73 591 aa9.09□□□□□ -0.95
SS18-220ENST00000582092 PTBP2Q9UKA9 531 aaKnown RBP9.09□□□□□ -0.95
SS18-220ENST00000582092 IKZF3Q9UKT9 509 aa9.09□□□□□ -0.95
SS18-220ENST00000582092 MMP17Q9ULZ9 603 aa9.09□□□□□ -0.95
SS18-220ENST00000582092 FADS3Q9Y5Q0 445 aa9.09□□□□□ -0.95
SS18-220ENST00000582092 SDK1Q7Z5N4 2213 aa9.09□□□□□ -0.95
SS18-220ENST00000582092 CEP192Q8TEP8 1941 aa9.09□□□□□ -0.95
SS18-220ENST00000582092 EP300Q09472 2414 aaPredicted RBP9.08□□□□□ -0.96
SS18-220ENST00000582092 ATP6AP2A0A1C7CYW4 349 aa9.08□□□□□ -0.96
SS18-220ENST00000582092 IGLON5A6NGN9 336 aa9.08□□□□□ -0.96
SS18-220ENST00000582092 FADS2P1A8MWK0 482 aa9.08□□□□□ -0.96
SS18-220ENST00000582092 H3BM21 787 aa9.08□□□□□ -0.96
SS18-220ENST00000582092 K7EQS6 105 aa9.08□□□□□ -0.96
SS18-220ENST00000582092 SLC28A1O00337 649 aa9.08□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms