RNA–Protein interactions for RNA: ENST00000581655.1

CSNK1D-218, Transcript of casein kinase 1 delta, humanhuman

TSL 4

Gene CSNK1D, Length 549 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1D-218ENST00000581655 CCDC172P0C7W6 258 aa12.11□□□□□ -0.47
CSNK1D-218ENST00000581655 ESRRAP11474 423 aaPredicted RBP12.11□□□□□ -0.47
CSNK1D-218ENST00000581655 DRD2P14416 443 aa12.11□□□□□ -0.47
CSNK1D-218ENST00000581655 GABRA4P48169 554 aa12.11□□□□□ -0.47
CSNK1D-218ENST00000581655 CASP6P55212 293 aa12.11□□□□□ -0.47
CSNK1D-218ENST00000581655 TMPRSS15P98073 1019 aa12.11□□□□□ -0.47
CSNK1D-218ENST00000581655 SLC25A11Q02978 314 aaKnown RBP12.11□□□□□ -0.47
CSNK1D-218ENST00000581655 GBE1Q04446 702 aa12.11□□□□□ -0.47
CSNK1D-218ENST00000581655 RBPJQ06330 500 aa12.11□□□□□ -0.47
CSNK1D-218ENST00000581655 PPP2R5EQ16537 467 aa12.11□□□□□ -0.47
CSNK1D-218ENST00000581655 LONRF2Q1L5Z9 754 aa12.11□□□□□ -0.47
CSNK1D-218ENST00000581655 CCDC183Q5T5S1 534 aa12.11□□□□□ -0.47
CSNK1D-218ENST00000581655 FAAH2Q6GMR7 532 aa12.11□□□□□ -0.47
CSNK1D-218ENST00000581655 FAM151BQ6UXP7 276 aa12.11□□□□□ -0.47
CSNK1D-218ENST00000581655 IRF2BP2Q7Z5L9 587 aa12.11□□□□□ -0.47
CSNK1D-218ENST00000581655 TRIM73Q86UV7 250 aa12.11□□□□□ -0.47
CSNK1D-218ENST00000581655 NT5DC3Q86UY8 548 aa12.11□□□□□ -0.47
CSNK1D-218ENST00000581655 LILRA3Q8N6C8 439 aaPredicted RBP12.11□□□□□ -0.47
CSNK1D-218ENST00000581655 CCNYQ8ND76 341 aa12.11□□□□□ -0.47
CSNK1D-218ENST00000581655 OR2L2Q8NH16 312 aa12.11□□□□□ -0.47
CSNK1D-218ENST00000581655 SPOCK3Q9BQ16 436 aa12.11□□□□□ -0.47
CSNK1D-218ENST00000581655 CEP41Q9BYV8 373 aa12.11□□□□□ -0.47
CSNK1D-218ENST00000581655 CBX8Q9HC52 389 aa12.11□□□□□ -0.47
CSNK1D-218ENST00000581655 SEMA3GQ9NS98 782 aa12.11□□□□□ -0.47
CSNK1D-218ENST00000581655 IRAK4Q9NWZ3 460 aa12.11□□□□□ -0.47
CSNK1D-218ENST00000581655 PLA2G3Q9NZ20 509 aa12.11□□□□□ -0.47
CSNK1D-218ENST00000581655 ACTR10Q9NZ32 417 aa12.11□□□□□ -0.47
CSNK1D-218ENST00000581655 HEBP2Q9Y5Z4 205 aa12.11□□□□□ -0.47
CSNK1D-218ENST00000581655 TRAV17A0A0B4J275 112 aa12.1□□□□□ -0.47
CSNK1D-218ENST00000581655 DYTNA2CJ06 578 aa12.1□□□□□ -0.47
CSNK1D-218ENST00000581655 C2orf74A8MZ97 194 aa12.1□□□□□ -0.47
CSNK1D-218ENST00000581655 SLC19A2O60779 497 aa12.1□□□□□ -0.47
CSNK1D-218ENST00000581655 FAM155BO75949 473 aa12.1□□□□□ -0.47
CSNK1D-218ENST00000581655 MSH3P20585 1137 aa12.1□□□□□ -0.47
CSNK1D-218ENST00000581655 AKT1P31749 480 aa12.1□□□□□ -0.47
CSNK1D-218ENST00000581655 HMGCLP35914 325 aa12.1□□□□□ -0.47
CSNK1D-218ENST00000581655 SPAM1P38567 509 aa12.1□□□□□ -0.47
CSNK1D-218ENST00000581655 TNFSF10P50591 281 aa12.1□□□□□ -0.47
CSNK1D-218ENST00000581655 CSNK1G2P78368 415 aa12.1□□□□□ -0.47
CSNK1D-218ENST00000581655 DPYSL3Q14195 570 aa12.1□□□□□ -0.47
CSNK1D-218ENST00000581655 ZIC1Q15915 447 aa12.1□□□□□ -0.47
CSNK1D-218ENST00000581655 C3AR1Q16581 482 aa12.1□□□□□ -0.47
CSNK1D-218ENST00000581655 TLDC1Q6P9B6 456 aa12.1□□□□□ -0.47
CSNK1D-218ENST00000581655 MEX3BQ6ZN04 569 aaKnown RBP12.1□□□□□ -0.47
CSNK1D-218ENST00000581655 SHISA6Q6ZSJ9 500 aa12.1□□□□□ -0.47
CSNK1D-218ENST00000581655 HOOK3Q86VS8 718 aa12.1□□□□□ -0.47
CSNK1D-218ENST00000581655 FERD3LQ96RJ6 166 aa12.1□□□□□ -0.47
CSNK1D-218ENST00000581655 SPSB2Q99619 263 aa12.1□□□□□ -0.47
CSNK1D-218ENST00000581655 XKR8Q9H6D3 395 aa12.1□□□□□ -0.47
CSNK1D-218ENST00000581655 MRPL47Q9HD33 250 aaKnown RBP12.1□□□□□ -0.47
CSNK1D-218ENST00000581655 ABI3Q9P2A4 366 aa12.1□□□□□ -0.47
CSNK1D-218ENST00000581655 TINAGQ9UJW2 476 aa12.1□□□□□ -0.47
CSNK1D-218ENST00000581655 PCDHGB6Q9Y5F9 930 aa12.1□□□□□ -0.47
CSNK1D-218ENST00000581655 INTS1Q8N201 2190 aaKnown RBP12.09□□□□□ -0.47
CSNK1D-218ENST00000581655 FANCGO15287 622 aa12.09□□□□□ -0.47
CSNK1D-218ENST00000581655 NDST3O95803 873 aa12.09□□□□□ -0.47
CSNK1D-218ENST00000581655 CRYABP02511 175 aaKnown RBP12.09□□□□□ -0.47
CSNK1D-218ENST00000581655 MX2P20592 715 aa12.09□□□□□ -0.47
CSNK1D-218ENST00000581655 ALAS2P22557 587 aa12.09□□□□□ -0.47
CSNK1D-218ENST00000581655 ARSEP51690 589 aa12.09□□□□□ -0.47
CSNK1D-218ENST00000581655 IFI35P80217 286 aaPredicted RBP12.09□□□□□ -0.47
CSNK1D-218ENST00000581655 SLC10A2Q12908 348 aaPredicted RBP12.09□□□□□ -0.47
CSNK1D-218ENST00000581655 PIGHQ14442 188 aaPredicted RBP12.09□□□□□ -0.47
CSNK1D-218ENST00000581655 NOMO1Q15155 1222 aa12.09□□□□□ -0.47
CSNK1D-218ENST00000581655 RBBP7Q16576 425 aa12.09□□□□□ -0.47
CSNK1D-218ENST00000581655 CDKAL1Q5VV42 579 aa12.09□□□□□ -0.47
CSNK1D-218ENST00000581655 CCDC70Q6NSX1 233 aa12.09□□□□□ -0.47
CSNK1D-218ENST00000581655 SPESP1Q6UW49 350 aa12.09□□□□□ -0.47
CSNK1D-218ENST00000581655 OVCH1Q7RTY7 1134 aa12.09□□□□□ -0.47
CSNK1D-218ENST00000581655 DAAM2Q86T65 1068 aa12.09□□□□□ -0.47
CSNK1D-218ENST00000581655 AMIGO1Q86WK6 493 aa12.09□□□□□ -0.47
CSNK1D-218ENST00000581655 FAM20CQ8IXL6 584 aa12.09□□□□□ -0.47
CSNK1D-218ENST00000581655 CFAP206Q8IYR0 622 aa12.09□□□□□ -0.47
CSNK1D-218ENST00000581655 ADGRF3Q8IZF5 1079 aa12.09□□□□□ -0.47
CSNK1D-218ENST00000581655 OR11G2Q8NGC1 345 aa12.09□□□□□ -0.47
CSNK1D-218ENST00000581655 OR52E1Q8NGJ3 308 aa12.09□□□□□ -0.47
CSNK1D-218ENST00000581655 FAM71BQ8TC56 605 aa12.09□□□□□ -0.47
CSNK1D-218ENST00000581655 DTX3LQ8TDB6 740 aa12.09□□□□□ -0.47
CSNK1D-218ENST00000581655 ADAMTS18Q8TE60 1221 aa12.09□□□□□ -0.47
CSNK1D-218ENST00000581655 TBRG4Q969Z0 631 aaKnown RBP eCLIP12.09□□□□□ -0.479e-6■■■□□ 15.7
CSNK1D-218ENST00000581655 FKBP10Q96AY3 582 aa12.09□□□□□ -0.47
CSNK1D-218ENST00000581655 IMP4Q96G21 291 aaKnown RBP12.09□□□□□ -0.47
CSNK1D-218ENST00000581655 RBM41Q96IZ5 413 aaKnown RBP12.09□□□□□ -0.47
CSNK1D-218ENST00000581655 SRPK1Q96SB4 655 aaKnown RBP12.09□□□□□ -0.47
CSNK1D-218ENST00000581655 ENKD1Q9H0I2 346 aa12.09□□□□□ -0.47
CSNK1D-218ENST00000581655 SOX17Q9H6I2 414 aaPredicted RBP12.09□□□□□ -0.47
CSNK1D-218ENST00000581655 MRM3Q9HC36 420 aaKnown RBP12.09□□□□□ -0.47
CSNK1D-218ENST00000581655 GTF3C1Q12789 2109 aa12.08□□□□□ -0.47
CSNK1D-218ENST00000581655 GLYATL1P3A0A0U1RQE8 302 aa12.08□□□□□ -0.48
CSNK1D-218ENST00000581655 KLHL33A6NCF5 533 aa12.08□□□□□ -0.48
CSNK1D-218ENST00000581655 BUD23O43709 281 aaKnown RBP12.08□□□□□ -0.48
CSNK1D-218ENST00000581655 WISP2O76076 250 aa12.08□□□□□ -0.48
CSNK1D-218ENST00000581655 RASAL1O95294 804 aa12.08□□□□□ -0.48
CSNK1D-218ENST00000581655 F10P00742 488 aa12.08□□□□□ -0.48
CSNK1D-218ENST00000581655 ITGAXP20702 1163 aa12.08□□□□□ -0.48
CSNK1D-218ENST00000581655 GJC1P36383 396 aa12.08□□□□□ -0.48
CSNK1D-218ENST00000581655 SSR1P43307 286 aaKnown RBP12.08□□□□□ -0.48
CSNK1D-218ENST00000581655 ITGA9Q13797 1035 aa12.08□□□□□ -0.48
CSNK1D-218ENST00000581655 NKG7Q16617 165 aa12.08□□□□□ -0.48
CSNK1D-218ENST00000581655 ATP13A4Q4VNC1 1196 aa12.08□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms