RNA–Protein interactions for RNA: ENST00000580751.5

SS18-216, Transcript of SS18, nBAF chromatin remodeling complex subunit, humanhuman

TSL 4

Gene SS18, Length 547 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18-216ENST00000580751 GPC4O75487 556 aa15.15■□□□□ 0.02
SS18-216ENST00000580751 VIPP01282 170 aa15.15■□□□□ 0.02
SS18-216ENST00000580751 ALDOAP04075 364 aaKnown RBP15.15■□□□□ 0.02
SS18-216ENST00000580751 FTH1P19P0C7X4 201 aa15.15■□□□□ 0.02
SS18-216ENST00000580751 MTHFD1P11586 935 aaKnown RBP15.15■□□□□ 0.02
SS18-216ENST00000580751 PNLIPP16233 465 aa15.15■□□□□ 0.02
SS18-216ENST00000580751 STMN1P16949 149 aa15.15■□□□□ 0.02
SS18-216ENST00000580751 KRT4P19013 534 aa15.15■□□□□ 0.02
SS18-216ENST00000580751 TYK2P29597 1187 aa15.15■□□□□ 0.02
SS18-216ENST00000580751 ID4P47928 161 aa15.15■□□□□ 0.02
SS18-216ENST00000580751 CCT5P48643 541 aa15.15■□□□□ 0.02
SS18-216ENST00000580751 RAB10P61026 200 aa15.15■□□□□ 0.02
SS18-216ENST00000580751 UBE2IP63279 158 aaKnown RBP15.15■□□□□ 0.02
SS18-216ENST00000580751 USP10Q14694 798 aaKnown RBP15.15■□□□□ 0.02
SS18-216ENST00000580751 CLCA4Q14CN2 919 aa15.15■□□□□ 0.02
SS18-216ENST00000580751 RPE65Q16518 533 aa15.15■□□□□ 0.02
SS18-216ENST00000580751 CHCHD2P9Q5T1J5 151 aaPredicted RBP15.15■□□□□ 0.02
SS18-216ENST00000580751 CAPRIN2Q6IMN6 1127 aaKnown RBP15.15■□□□□ 0.02
SS18-216ENST00000580751 UGT3A1Q6NUS8 523 aa15.15■□□□□ 0.02
SS18-216ENST00000580751 ZNF438Q7Z4V0 828 aa15.15■□□□□ 0.02
SS18-216ENST00000580751 SRRM1Q8IYB3 904 aaKnown RBP15.15■□□□□ 0.02
SS18-216ENST00000580751 SLC22A15Q8IZD6 547 aa15.15■□□□□ 0.02
SS18-216ENST00000580751 ZBTB2Q8N680 514 aa15.15■□□□□ 0.02
SS18-216ENST00000580751 GPATCH11Q8N954 259 aa15.15■□□□□ 0.02
SS18-216ENST00000580751 CCDC74AQ96AQ1 378 aa15.15■□□□□ 0.02
SS18-216ENST00000580751 C12orf66Q96MD2 445 aa15.15■□□□□ 0.02
SS18-216ENST00000580751 NDNQ99608 321 aa15.15■□□□□ 0.02
SS18-216ENST00000580751 LDHAL6BQ9BYZ2 381 aaPredicted RBP15.15■□□□□ 0.02
SS18-216ENST00000580751 LATS2Q9NRM7 1088 aa15.15■□□□□ 0.02
SS18-216ENST00000580751 IMP3Q9NV31 184 aaKnown RBP15.15■□□□□ 0.02
SS18-216ENST00000580751 TAS2R13Q9NYV9 303 aa15.15■□□□□ 0.02
SS18-216ENST00000580751 ZNF624Q9P2J8 865 aaPredicted RBP15.15■□□□□ 0.02
SS18-216ENST00000580751 DCDC2Q9UHG0 476 aa15.15■□□□□ 0.02
SS18-216ENST00000580751 TLK1Q9UKI8 766 aa15.15■□□□□ 0.02
SS18-216ENST00000580751 MTO1Q9Y2Z2 717 aaKnown RBP15.15■□□□□ 0.02
SS18-216ENST00000580751 HEBP2Q9Y5Z4 205 aa15.15■□□□□ 0.02
SS18-216ENST00000580751 RNF215Q9Y6U7 377 aa15.15■□□□□ 0.02
SS18-216ENST00000580751 CACNA1AO00555 2505 aa15.15■□□□□ 0.02
SS18-216ENST00000580751 A0A087X1B8 175 aa15.14■□□□□ 0.01
SS18-216ENST00000580751 GIPC1O14908 333 aa15.14■□□□□ 0.01
SS18-216ENST00000580751 TM9SF1O15321 606 aa15.14■□□□□ 0.01
SS18-216ENST00000580751 SLCO2B1O94956 709 aa15.14■□□□□ 0.01
SS18-216ENST00000580751 NR1D1P20393 614 aa15.14■□□□□ 0.01
SS18-216ENST00000580751 KCNA4P22459 653 aa15.14■□□□□ 0.01
SS18-216ENST00000580751 NDUFS1P28331 727 aa15.14■□□□□ 0.01
SS18-216ENST00000580751 OAS2P29728 719 aaKnown RBP15.14■□□□□ 0.01
SS18-216ENST00000580751 PDHA2P29803 388 aa15.14■□□□□ 0.01
SS18-216ENST00000580751 CRHR1P34998 444 aa15.14■□□□□ 0.01
SS18-216ENST00000580751 SLC19A1P41440 591 aa15.14■□□□□ 0.01
SS18-216ENST00000580751 ABCG1P45844 678 aa15.14■□□□□ 0.01
SS18-216ENST00000580751 GPR3P46089 330 aa15.14■□□□□ 0.01
SS18-216ENST00000580751 CLCN7P51798 805 aa15.14■□□□□ 0.01
SS18-216ENST00000580751 PPP2R2AP63151 447 aa15.14■□□□□ 0.01
SS18-216ENST00000580751 NR1D2Q14995 579 aa15.14■□□□□ 0.01
SS18-216ENST00000580751 TUBB8Q3ZCM7 444 aa15.14■□□□□ 0.01
SS18-216ENST00000580751 TAF1BQ53T94 588 aaPredicted RBP15.14■□□□□ 0.01
SS18-216ENST00000580751 HECTD2Q5U5R9 776 aa15.14■□□□□ 0.01
SS18-216ENST00000580751 NAPRTQ6XQN6 538 aa15.14■□□□□ 0.01
SS18-216ENST00000580751 BANPQ8N9N5 519 aa15.14■□□□□ 0.01
SS18-216ENST00000580751 SPDYE1Q8NFV5 336 aaPredicted RBP15.14■□□□□ 0.01
SS18-216ENST00000580751 FAM76AQ8TAV0 307 aa15.14■□□□□ 0.01
SS18-216ENST00000580751 FAM136AQ96C01 138 aa15.14■□□□□ 0.01
SS18-216ENST00000580751 INSM2Q96T92 566 aaPredicted RBP15.14■□□□□ 0.01
SS18-216ENST00000580751 GPR21Q99679 349 aa15.14■□□□□ 0.01
SS18-216ENST00000580751 UCK1Q9HA47 277 aa15.14■□□□□ 0.01
SS18-216ENST00000580751 SYTL2Q9HCH5 934 aa15.14■□□□□ 0.01
SS18-216ENST00000580751 SNX15Q9NRS6 342 aa15.14■□□□□ 0.01
SS18-216ENST00000580751 TOR4AQ9NXH8 423 aa15.14■□□□□ 0.01
SS18-216ENST00000580751 TRMT6Q9UJA5 497 aaKnown RBP15.14■□□□□ 0.01
SS18-216ENST00000580751 SLC39A10Q9ULF5 831 aa15.14■□□□□ 0.01
SS18-216ENST00000580751 CDYLQ9Y232 598 aa15.14■□□□□ 0.01
SS18-216ENST00000580751 MED16Q9Y2X0 877 aa15.14■□□□□ 0.01
SS18-216ENST00000580751 COLEC10Q9Y6Z7 277 aa15.14■□□□□ 0.01
SS18-216ENST00000580751 A0A1W2PPM1 405 aa15.13■□□□□ 0.01
SS18-216ENST00000580751 EIF3FO00303 357 aaPredicted RBP15.13■□□□□ 0.01
SS18-216ENST00000580751 PPM1DO15297 605 aa15.13■□□□□ 0.01
SS18-216ENST00000580751 TYROBPO43914 113 aa15.13■□□□□ 0.01
SS18-216ENST00000580751 DKK1O94907 266 aa15.13■□□□□ 0.01
SS18-216ENST00000580751 ZWINTO95229 277 aa15.13■□□□□ 0.01
SS18-216ENST00000580751 RPN2P04844 631 aa15.13■□□□□ 0.01
SS18-216ENST00000580751 ENO3P13929 434 aaPredicted RBP15.13■□□□□ 0.01
SS18-216ENST00000580751 FDXRP22570 491 aa15.13■□□□□ 0.01
SS18-216ENST00000580751 KPNA2P52292 529 aaKnown RBP15.13■□□□□ 0.01
SS18-216ENST00000580751 E2F1Q01094 437 aa15.13■□□□□ 0.01
SS18-216ENST00000580751 BMPR2Q13873 1038 aa15.13■□□□□ 0.01
SS18-216ENST00000580751 KRT33BQ14525 404 aa15.13■□□□□ 0.01
SS18-216ENST00000580751 GBX1Q14549 363 aa15.13■□□□□ 0.01
SS18-216ENST00000580751 PPM1JQ5JR12 505 aa15.13■□□□□ 0.01
SS18-216ENST00000580751 PERM1Q5SV97 790 aa15.13■□□□□ 0.01
SS18-216ENST00000580751 RBM20Q5T481 1227 aaKnown RBP15.13■□□□□ 0.01
SS18-216ENST00000580751 LRRC8EQ6NSJ5 796 aa15.13■□□□□ 0.01
SS18-216ENST00000580751 SIDT2Q8NBJ9 832 aaKnown RBP15.13■□□□□ 0.01
SS18-216ENST00000580751 WDR48Q8TAF3 677 aa15.13■□□□□ 0.01
SS18-216ENST00000580751 CD200R1Q8TD46 325 aa15.13■□□□□ 0.01
SS18-216ENST00000580751 ZFPM2Q8WW38 1151 aa15.13■□□□□ 0.01
SS18-216ENST00000580751 INPP5DQ92835 1189 aa15.13■□□□□ 0.01
SS18-216ENST00000580751 ATXN7L3BQ96GX2 97 aa15.13■□□□□ 0.01
SS18-216ENST00000580751 APOPT1Q96IL0 206 aa15.13■□□□□ 0.01
SS18-216ENST00000580751 ELMO2Q96JJ3 720 aa15.13■□□□□ 0.01
SS18-216ENST00000580751 SLC38A3Q99624 504 aa15.13■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms