RNA–Protein interactions for RNA: ENST00000580419.5

SMARCE1-216, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1, humanhuman

TSL 1 (best) BASIC

Gene SMARCE1, Length 1,228 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1-216ENST00000580419 DSELQ8IZU8 1212 aa14.06□□□□□ -0.16
SMARCE1-216ENST00000580419 LILRA3Q8N6C8 439 aaPredicted RBP14.06□□□□□ -0.16
SMARCE1-216ENST00000580419 OR52E1Q8NGJ3 308 aa14.06□□□□□ -0.16
SMARCE1-216ENST00000580419 OR13J1Q8NGT2 312 aa14.06□□□□□ -0.16
SMARCE1-216ENST00000580419 OR5K2Q8NHB8 316 aa14.06□□□□□ -0.16
SMARCE1-216ENST00000580419 NACC2Q96BF6 587 aa14.06□□□□□ -0.16
SMARCE1-216ENST00000580419 TCTN2Q96GX1 697 aa14.06□□□□□ -0.16
SMARCE1-216ENST00000580419 FERD3LQ96RJ6 166 aa14.06□□□□□ -0.16
SMARCE1-216ENST00000580419 EIF2B3Q9NR50 452 aaKnown RBP14.06□□□□□ -0.16
SMARCE1-216ENST00000580419 MRPS18BQ9Y676 258 aaKnown RBP14.06□□□□□ -0.16
SMARCE1-216ENST00000580419 CLEC18AA5D8T8 446 aa14.05□□□□□ -0.16
SMARCE1-216ENST00000580419 SLC9B1P1A6NJY1 282 aa14.05□□□□□ -0.16
SMARCE1-216ENST00000580419 BTN3A1O00481 513 aa14.05□□□□□ -0.16
SMARCE1-216ENST00000580419 KATNA1O75449 491 aa14.05□□□□□ -0.16
SMARCE1-216ENST00000580419 CEACAM4O75871 244 aa14.05□□□□□ -0.16
SMARCE1-216ENST00000580419 FKBP9O95302 570 aa14.05□□□□□ -0.16
SMARCE1-216ENST00000580419 FTCDO95954 541 aa14.05□□□□□ -0.16
SMARCE1-216ENST00000580419 FURINP09958 794 aa14.05□□□□□ -0.16
SMARCE1-216ENST00000580419 POLR2CP19387 275 aaPredicted RBP14.05□□□□□ -0.16
SMARCE1-216ENST00000580419 PDHA2P29803 388 aa14.05□□□□□ -0.16
SMARCE1-216ENST00000580419 PREPP48147 710 aa14.05□□□□□ -0.16
SMARCE1-216ENST00000580419 CDKN1CP49918 316 aaPredicted RBP14.05□□□□□ -0.16
SMARCE1-216ENST00000580419 TMPRSS15P98073 1019 aa14.05□□□□□ -0.16
SMARCE1-216ENST00000580419 GPS2Q13227 327 aa14.05□□□□□ -0.16
SMARCE1-216ENST00000580419 DNAJC21Q5F1R6 531 aaKnown RBP14.05□□□□□ -0.16
SMARCE1-216ENST00000580419 AARS2Q5JTZ9 985 aaKnown RBP14.05□□□□□ -0.16
SMARCE1-216ENST00000580419 SEL1L2Q5TEA6 688 aa14.05□□□□□ -0.16
SMARCE1-216ENST00000580419 DUS1LQ6P1R4 473 aaKnown RBP14.05□□□□□ -0.16
SMARCE1-216ENST00000580419 SPESP1Q6UW49 350 aa14.05□□□□□ -0.16
SMARCE1-216ENST00000580419 CLEC18BQ6UXF7 455 aa14.05□□□□□ -0.16
SMARCE1-216ENST00000580419 TAS2R42Q7RTR8 314 aa14.05□□□□□ -0.16
SMARCE1-216ENST00000580419 SLC13A5Q86YT5 568 aaPredicted RBP14.05□□□□□ -0.16
SMARCE1-216ENST00000580419 MPP5Q8N3R9 675 aa14.05□□□□□ -0.16
SMARCE1-216ENST00000580419 CLDN19Q8N6F1 224 aa14.05□□□□□ -0.16
SMARCE1-216ENST00000580419 CLEC18CQ8NCF0 446 aa14.05□□□□□ -0.16
SMARCE1-216ENST00000580419 ADAMTS17Q8TE56 1095 aa14.05□□□□□ -0.16
SMARCE1-216ENST00000580419 ELMO2Q96JJ3 720 aa14.05□□□□□ -0.16
SMARCE1-216ENST00000580419 IP6K3Q96PC2 410 aa14.05□□□□□ -0.16
SMARCE1-216ENST00000580419 TRAPPC9Q96Q05 1148 aa14.05□□□□□ -0.16
SMARCE1-216ENST00000580419 CARD6Q9BX69 1037 aa14.05□□□□□ -0.16
SMARCE1-216ENST00000580419 TSSK1BQ9BXA7 367 aa14.05□□□□□ -0.16
SMARCE1-216ENST00000580419 EPN3Q9H201 632 aa14.05□□□□□ -0.16
SMARCE1-216ENST00000580419 FAM96AQ9H5X1 160 aa14.05□□□□□ -0.16
SMARCE1-216ENST00000580419 CASS4Q9NQ75 786 aa14.05□□□□□ -0.16
SMARCE1-216ENST00000580419 SOHLH2Q9NX45 425 aa14.05□□□□□ -0.16
SMARCE1-216ENST00000580419 SMARCAL1Q9NZC9 954 aa14.05□□□□□ -0.16
SMARCE1-216ENST00000580419 PAK5Q9P286 719 aa14.05□□□□□ -0.16
SMARCE1-216ENST00000580419 DRG1Q9Y295 367 aaKnown RBP14.05□□□□□ -0.16
SMARCE1-216ENST00000580419 MAN2B2Q9Y2E5 1009 aa14.05□□□□□ -0.16
SMARCE1-216ENST00000580419 CAPN6Q9Y6Q1 641 aa14.05□□□□□ -0.16
SMARCE1-216ENST00000580419 CNTRLQ7Z7A1 2325 aa14.04□□□□□ -0.16
SMARCE1-216ENST00000580419 SPENQ96T58 3664 aaKnown RBP14.04□□□□□ -0.16
SMARCE1-216ENST00000580419 TCRBV7S2A1N4TA0A589 114 aa14.04□□□□□ -0.16
SMARCE1-216ENST00000580419 H3BMH7 237 aa14.04□□□□□ -0.16
SMARCE1-216ENST00000580419 BTN3A3O00478 584 aa14.04□□□□□ -0.16
SMARCE1-216ENST00000580419 NTRK1P04629 796 aa14.04□□□□□ -0.16
SMARCE1-216ENST00000580419 TPH1P17752 444 aa14.04□□□□□ -0.16
SMARCE1-216ENST00000580419 ITGA1P56199 1179 aa14.04□□□□□ -0.16
SMARCE1-216ENST00000580419 CDK16Q00536 496 aa14.04□□□□□ -0.16
SMARCE1-216ENST00000580419 KIR2DS3Q14952 304 aa14.04□□□□□ -0.16
SMARCE1-216ENST00000580419 GPR19Q15760 415 aa14.04□□□□□ -0.16
SMARCE1-216ENST00000580419 CCNG2Q16589 344 aa14.04□□□□□ -0.16
SMARCE1-216ENST00000580419 TSTD2Q5T7W7 516 aa14.04□□□□□ -0.16
SMARCE1-216ENST00000580419 GAS2L3Q86XJ1 694 aa14.04□□□□□ -0.16
SMARCE1-216ENST00000580419 SLC22A15Q8IZD6 547 aa14.04□□□□□ -0.16
SMARCE1-216ENST00000580419 DNAAF3Q8N9W5 541 aa14.04□□□□□ -0.16
SMARCE1-216ENST00000580419 SLC38A9Q8NBW4 561 aa14.04□□□□□ -0.16
SMARCE1-216ENST00000580419 OR4L1Q8NH43 312 aa14.04□□□□□ -0.16
SMARCE1-216ENST00000580419 MAIP1Q8WWC4 291 aa14.04□□□□□ -0.16
SMARCE1-216ENST00000580419 ASZ1Q8WWH4 475 aa14.04□□□□□ -0.16
SMARCE1-216ENST00000580419 ETNK1Q9HBU6 452 aa14.04□□□□□ -0.16
SMARCE1-216ENST00000580419 ACTR10Q9NZ32 417 aa14.04□□□□□ -0.16
SMARCE1-216ENST00000580419 PACSIN2Q9UNF0 486 aaPredicted RBP14.04□□□□□ -0.16
SMARCE1-216ENST00000580419 MRFAP1Q9Y605 127 aa14.04□□□□□ -0.16
SMARCE1-216ENST00000580419 CCDC162PA2VCL2 907 aa14.03□□□□□ -0.16
SMARCE1-216ENST00000580419 GSAPA4D1B5 854 aa14.03□□□□□ -0.16
SMARCE1-216ENST00000580419 CDC14CA4D256 554 aa14.03□□□□□ -0.16
SMARCE1-216ENST00000580419 BHMG1C9JSJ3 638 aaPredicted RBP14.03□□□□□ -0.16
SMARCE1-216ENST00000580419 ARHGAP6O43182 974 aa14.03□□□□□ -0.16
SMARCE1-216ENST00000580419 GPC4O75487 556 aa14.03□□□□□ -0.16
SMARCE1-216ENST00000580419 IGHEP01854 428 aa14.03□□□□□ -0.16
SMARCE1-216ENST00000580419 RPN2P04844 631 aa14.03□□□□□ -0.16
SMARCE1-216ENST00000580419 CAPN1P07384 714 aa14.03□□□□□ -0.16
SMARCE1-216ENST00000580419 ST6GAL1P15907 406 aa14.03□□□□□ -0.16
SMARCE1-216ENST00000580419 NFKB2Q00653 900 aa14.03□□□□□ -0.16
SMARCE1-216ENST00000580419 SLC5A12Q1EHB4 618 aa14.03□□□□□ -0.16
SMARCE1-216ENST00000580419 ATP1A1-AS1Q5TC04 95 aa14.03□□□□□ -0.16
SMARCE1-216ENST00000580419 MEI1Q5TIA1 1274 aa14.03□□□□□ -0.16
SMARCE1-216ENST00000580419 ZNF385CQ66K41 422 aaPredicted RBP14.03□□□□□ -0.16
SMARCE1-216ENST00000580419 MED25Q71SY5 747 aa14.03□□□□□ -0.16
SMARCE1-216ENST00000580419 LRRC6Q86X45 466 aa14.03□□□□□ -0.16
SMARCE1-216ENST00000580419 TMEM102Q8N9M5 508 aaPredicted RBP14.03□□□□□ -0.16
SMARCE1-216ENST00000580419 OR52K1Q8NGK4 314 aa14.03□□□□□ -0.16
SMARCE1-216ENST00000580419 FLVCR1-AS1Q8TAF5 88 aa14.03□□□□□ -0.16
SMARCE1-216ENST00000580419 PROKR1Q8TCW9 393 aa14.03□□□□□ -0.16
SMARCE1-216ENST00000580419 DENND1AQ8TEH3 1009 aa14.03□□□□□ -0.16
SMARCE1-216ENST00000580419 MR1Q95460 341 aa14.03□□□□□ -0.16
SMARCE1-216ENST00000580419 SLC22A18Q96BI1 424 aa14.03□□□□□ -0.16
SMARCE1-216ENST00000580419 CHST8Q9H2A9 424 aa14.03□□□□□ -0.16
SMARCE1-216ENST00000580419 ACTR5Q9H9F9 607 aaPredicted RBP14.03□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms